Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9342 Trifolium pratense HOM05D000457 ORTHO05D000560 1.9e-43 178.7 87 100.0
TPR.G17525 Trifolium pratense HOM05D000457 ORTHO05D000560 1.1e-35 152.9 87 86.2
Medtr2g028530 Medicago truncatula HOM05D000457 ORTHO05D000560 1.3e-28 129.4 88 76.1
Ca_11365_v3 Cicer arietinum L. HOM05D000457 ORTHO05D000560 2.5e-27 125.2 87 72.4
Psat1g170720 Pisum sativum HOM05D000457 ORTHO05D000560 8.3e-23 110.2 86 65.1
Glyma.09G018600 Glycine max HOM05D000457 ORTHO05D000560 1.5e-19 99.4 86 58.1
Glyma.15G124700 Glycine max HOM05D000457 ORTHO05D000560 3.6e-18 94.7 86 54.7
Lj6g0019314 Lotus japonicus HOM05D000457 ORTHO05D000560 2.4e-17 92.0 87 56.3
Phvul.006G133600 Phaseolus vulgaris HOM05D000457 ORTHO05D000560 4.4e-16 87.8 86 50.0
VMungo0540G0366 Vigna mungo HOM05D000457 ORTHO05D000560 8.4e-15 83.6 86 47.7
QL02p104109 Quercus lobata HOM05D000457 ORTHO05D000560 4.8e-10 67.8 86 43.0
Lalb_Chr20g0119821 Lupinus albus HOM05D000457 ORTHO05D000560 1.1e-09 66.6 86 45.3
GSVIVG01023105001 Vitis vinifera HOM05D000457 ORTHO05D000560 1.8e-09 65.9 77 45.5
MSTRG.20345 Avicennia marina HOM05D000457 ORTHO05D000560 2.4e-09 65.5 77 46.8
Migut.B00686 Erythranthe guttata HOM05D000457 ORTHO05D000560 2.4e-09 65.5 79 44.3
SGA_v2.0_scaffold254G45213 Striga asiatica HOM05D000457 ORTHO05D000560 9.0e-09 63.5 85 41.2
HanXRQChr14g0440361 Helianthus annuus HOM05D000457 ORTHO05D000560 1.5e-08 62.8 79 45.6
CiPaw.12G009700 Carya illinoinensis HOM05D000457 ORTHO05D000560 3.4e-08 61.6 86 44.2
Lsat_1_v5_gn_9_81901 Lactuca sativa HOM05D000457 ORTHO05D000560 3.4e-08 61.6 77 45.5
Cc02_g36770 Coffea canephora HOM05D000457 ORTHO05D000560 5.8e-08 60.8 77 42.9
CiPaw.05G000200 Carya illinoinensis HOM05D000457 ORTHO05D000560 2.9e-07 58.5 80 38.8
Manes.06G016800 Manihot esculenta HOM05D000457 ORTHO05D000560 3.8e-07 58.2 78 43.6
Nitab4.5_0004090g0120 Nicotiana tabacum HOM05D000457 ORTHO05D000560 3.8e-07 58.2 76 48.7
Nitab4.5_0004176g0030 Nicotiana tabacum HOM05D000457 ORTHO05D000560 3.8e-07 58.2 76 48.7
RcHm_v2.0_Chr7g0218171 Rosa chinensis HOM05D000457 ORTHO05D000560 3.8e-07 58.2 86 38.4
Rhsim10G0099300 Rhododendron simsii HOM05D000457 ORTHO05D000560 4.9e-07 57.8 77 42.9
A10p08720 Brassica napus HOM05D000457 ORTHO05D000560 6.4e-07 57.4 78 39.7
BraSC37t46130Z Brassica rapa HOM05D000457 ORTHO05D000560 6.4e-07 57.4 78 39.7
CiPaw.05G000100 Carya illinoinensis HOM05D000457 ORTHO05D000560 8.4e-07 57.0 80 37.5
Manes.06G016725 Manihot esculenta HOM05D000457 ORTHO05D000560 8.4e-07 57.0 78 42.3
Cfa004411 Carpinus fangiana HOM05D000457 ORTHO05D000560 1.4e-06 56.2 86 39.5
Actinidia01649 Actinidia chinensis HOM05D000457 ORTHO05D000560 3.2e-06 55.1 76 39.5
AL8G23670 Arabidopsis lyrata HOM05D000457 ORTHO05D000560 3.2e-06 55.1 78 37.2
PGSC0003DMG401018223 Solanum tuberosum HOM05D000457 ORTHO05D000560 3.2e-06 55.1 77 45.5
CARHR259040 Cardamine hirsuta HOM05D000457 ORTHO05D000560 4.2e-06 54.7 78 37.2
Nitab4.5_0004176g0050 Nicotiana tabacum HOM05D000457 ORTHO05D000560 4.2e-06 54.7 77 45.5
arahy.Tifrunner.gnm1.ann1.ALC201 Arachis hypogaea HOM05D000457 ORTHO05D000560 5.4e-06 54.3 53 45.3
Ciclev10000235m.g Citrus clementina HOM05D000457 ORTHO05D000560 5.4e-06 54.3 86 39.5
Peaxi162Scf00194g00817 Petunia axillaris HOM05D000457 ORTHO05D000560 7.1e-06 53.9 77 44.2
THA.LOC104800318 Tarenaya hassleriana HOM05D000457 ORTHO05D000560 7.1e-06 53.9 77 37.7
BcaC04g20829 Brassica carinata HOM05D000457 ORTHO05D000560 9.3e-06 53.5 78 38.5
C09p38720 Brassica napus HOM05D000457 ORTHO05D000560 9.3e-06 53.5 78 38.5
BolC9t56727H Brassica oleracea HOM05D000457 ORTHO05D000560 9.3e-06 53.5 78 38.5
RcHm_v2.0_Chr7g0218161 Rosa chinensis HOM05D000457 ORTHO05D000560 9.3e-06 53.5 84 38.1
Sp6g11000 Schrenkiella parvula HOM05D000457 ORTHO05D000560 9.3e-06 53.5 78 34.6


User provided reference genes

Program Settings