Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9336 Trifolium pratense HOM05D005432 ORTHO05D004599 5.7e-49 197.6 124 100.0
Medtr5g015190 Medicago truncatula HOM05D005432 ORTHO05D004599 7.2e-28 127.5 125 62.4
Psat2g172120 Pisum sativum HOM05D005432 ORTHO05D004599 1.1e-25 120.2 127 59.8
Phvul.002G009700 Phaseolus vulgaris HOM05D005432 ORTHO05D004599 3.0e-18 95.5 122 50.8
Glyma.01G195300 Glycine max HOM05D005432 ORTHO05D004599 1.5e-17 93.2 71 70.4
VMungo1215G3148 Vigna mungo HOM05D005432 ORTHO05D004599 6.3e-16 87.8 69 65.2
Glyma.11G046400 Glycine max HOM05D005432 ORTHO05D004599 7.0e-15 84.3 137 41.6
Glyma.05G107500 Glycine max HOM05D005432 ORTHO05D004599 3.5e-14 82.0 97 47.4
Ca_22097_v3 Cicer arietinum L. HOM05D005432 ORTHO05D004599 5.5e-12 74.7 59 64.4
Glyma.17G159600 Glycine max HOM05D005432 ORTHO05D004599 7.2e-12 74.3 61 59.0
Lj4g0003965 Lotus japonicus HOM05D005432 ORTHO05D004599 7.2e-12 74.3 91 47.3
Phvul.003G233700 Phaseolus vulgaris HOM05D005432 ORTHO05D004599 9.4e-12 73.9 67 56.7
VMungo0251G2573 Vigna mungo HOM05D005432 ORTHO05D004599 9.4e-12 73.9 92 44.6
arahy.Tifrunner.gnm1.ann1.6CR1D2 Arachis hypogaea HOM05D005432 ORTHO05D004599 1.6e-11 73.2 120 47.5
Psat4g081120 Pisum sativum HOM05D005432 ORTHO05D004599 1.6e-11 73.2 93 48.4
Duzib264G0647 Durio zibethinus HOM05D005432 ORTHO05D004599 1.8e-10 69.7 89 49.4
Gohir.D12G076200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 2.3e-10 69.3 60 61.7
Gohir.A12G078000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 3.0e-10 68.9 69 56.5
Gorai.008G084600 Gossypium raimondii HOM05D005432 ORTHO05D004599 3.0e-10 68.9 69 56.5
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 4.0e-10 68.6 53 62.3
Atru.chr3.1044 Acer truncatum HOM05D005432 ORTHO05D004599 5.2e-10 68.2 66 51.5
arahy.Tifrunner.gnm1.ann1.0M6NCC Arachis hypogaea HOM05D005432 ORTHO05D004599 8.8e-10 67.4 119 44.5
Duzib147G0737 Durio zibethinus HOM05D005432 ORTHO05D004599 8.8e-10 67.4 80 52.5
FvH4_1g18020 Fragaria vesca HOM05D005432 ORTHO05D004599 1.5e-09 66.6 70 50.0
FAN19G1119 Fragaria x ananassa HOM05D005432 ORTHO05D004599 1.5e-09 66.6 70 50.0
FAN28G2020 Fragaria x ananassa HOM05D005432 ORTHO05D004599 1.5e-09 66.6 70 50.0
Gohir.D11G210200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.5e-09 66.6 59 57.6
Gorai.007G225500 Gossypium raimondii HOM05D005432 ORTHO05D004599 1.5e-09 66.6 59 57.6
FAN23G2070 Fragaria x ananassa HOM05D005432 ORTHO05D004599 2.0e-09 66.2 70 48.6
TWI77G0559 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 2.6e-09 65.9 58 55.2
CiPaw.01G002700 Carya illinoinensis HOM05D005432 ORTHO05D004599 3.4e-09 65.5 120 34.2
Gohir.A11G213000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 3.4e-09 65.5 59 55.9
Cfa004151 Carpinus fangiana HOM05D005432 ORTHO05D004599 4.4e-09 65.1 91 46.2
Dinv23035 Davidia involucrata HOM05D005432 ORTHO05D004599 4.4e-09 65.1 62 51.6
TPR.G24244 Trifolium pratense HOM05D005432 ORTHO05D004599 4.4e-09 65.1 97 43.3
TWI74G0597 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 4.4e-09 65.1 50 62.0
Lalb_Chr05g0225821 Lupinus albus HOM05D005432 ORTHO05D004599 5.7e-09 64.7 58 56.9
Medtr4g097350 Medicago truncatula HOM05D005432 ORTHO05D004599 7.5e-09 64.3 93 45.2
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 7.5e-09 64.3 59 50.8
Haze_15264 Corylus avellana HOM05D005432 ORTHO05D004599 9.8e-09 63.9 56 57.1
Manes.13G109800 Manihot esculenta HOM05D005432 ORTHO05D004599 9.8e-09 63.9 58 55.2
RcHm_v2.0_Chr2g0108511 Rosa chinensis HOM05D005432 ORTHO05D004599 1.3e-08 63.5 69 49.3
Thecc.01G075000 Theobroma cacao HOM05D005432 ORTHO05D004599 1.3e-08 63.5 84 48.8
Sabra14G0006100 Salix brachista HOM05D005432 ORTHO05D004599 1.7e-08 63.2 72 47.2
CANSAT01G2351 Cannabis sativa HOM05D005432 ORTHO05D004599 2.2e-08 62.8 78 52.6
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 2.8e-08 62.4 89 44.9
Medtr4g097280 Medicago truncatula HOM05D005432 ORTHO05D004599 3.7e-08 62.0 92 42.4
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 3.7e-08 62.0 59 55.9
ClCG01G017720 Citrullus lanatus HOM05D005432 ORTHO05D004599 4.9e-08 61.6 61 50.8
Eucgr.H02317 Eucalyptus grandis HOM05D005432 ORTHO05D004599 4.9e-08 61.6 51 60.8
FAN26G1008 Fragaria x ananassa HOM05D005432 ORTHO05D004599 4.9e-08 61.6 71 47.9
Lalb_Chr16g0378951 Lupinus albus HOM05D005432 ORTHO05D004599 4.9e-08 61.6 81 48.1
Eucgr.H02318 Eucalyptus grandis HOM05D005432 ORTHO05D004599 6.3e-08 61.2 46 65.2
QL06p039087 Quercus lobata HOM05D005432 ORTHO05D004599 6.3e-08 61.2 53 54.7
TPR.G24220 Trifolium pratense HOM05D005432 ORTHO05D004599 8.3e-08 60.8 73 50.7
TPR.G24237 Trifolium pratense HOM05D005432 ORTHO05D004599 8.3e-08 60.8 73 47.9
MD02G1188700 Malus domestica HOM05D005432 ORTHO05D004599 1.1e-07 60.5 75 49.3
Medtr4g097360 Medicago truncatula HOM05D005432 ORTHO05D004599 1.1e-07 60.5 67 49.3
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 2.4e-07 59.3 54 53.7
Manes.12G116300 Manihot esculenta HOM05D005432 ORTHO05D004599 3.1e-07 58.9 59 54.2
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 3.1e-07 58.9 71 49.3
Prupe.6G218300 Prunus persica HOM05D005432 ORTHO05D004599 3.1e-07 58.9 52 50.0
TAR628G1364 Trochodendron aralioides HOM05D005432 ORTHO05D004599 3.1e-07 58.9 59 52.5
PSO541G2677 Papaver somniferum HOM05D005432 ORTHO05D004599 7.0e-07 57.8 63 50.8
Nn5g30641 Nelumbo nucifera HOM05D005432 ORTHO05D004599 9.2e-07 57.4 57 50.9
Psat4g081760 Pisum sativum HOM05D005432 ORTHO05D004599 1.2e-06 57.0 93 40.9
MELO3C007650.2 Cucumis melo HOM05D005432 ORTHO05D004599 1.6e-06 56.6 111 36.0
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.6e-06 56.6 68 52.9
Prupe.6G218200 Prunus persica HOM05D005432 ORTHO05D004599 2.0e-06 56.2 70 45.7
Sed0012898 Sechium edule HOM05D005432 ORTHO05D004599 2.0e-06 56.2 64 46.9
Cpa.g.sc129.80 Carica papaya HOM05D005432 ORTHO05D004599 4.5e-06 55.1 69 43.5
Peaxi162Scf00500g00034 Petunia axillaris HOM05D005432 ORTHO05D004599 4.5e-06 55.1 54 48.1
AT2G22880 Arabidopsis thaliana HOM05D009364 ORTHO05D004599 5.9e-06 54.7 62 48.4
COL.COLO4_11602 Corchorus olitorius HOM05D005432 ORTHO05D004599 5.9e-06 54.7 40 65.0
AL7G12970 Arabidopsis lyrata HOM05D009364 ORTHO05D004599 7.7e-06 54.3 63 49.2


User provided reference genes

Program Settings