Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9276 Trifolium pratense HOM05D002202 ORTHO05D002176 9.9e-86 320.1 163 100.0
Medtr1g067750 Medicago truncatula HOM05D002202 ORTHO05D002176 7.4e-49 197.6 145 70.3
Psat6g066040 Pisum sativum HOM05D002202 ORTHO05D002176 2.3e-34 149.4 129 69.8
Lj5g0000735 Lotus japonicus HOM05D002202 ORTHO05D002176 7.5e-33 144.4 150 52.7
Lalb_Chr02g0153151 Lupinus albus HOM05D002202 ORTHO05D002176 2.0e-25 119.8 133 56.4
Glyma.10G045000 Glycine max HOM05D002202 ORTHO05D002176 3.4e-25 119.0 124 54.8
Glyma.13G132600 Glycine max HOM05D002202 ORTHO05D002176 4.4e-25 118.6 128 51.6
Phvul.007G158700 Phaseolus vulgaris HOM05D002202 ORTHO05D002176 9.2e-23 110.9 143 46.2
VMungo0720G1790 Vigna mungo HOM05D002202 ORTHO05D002176 5.0e-21 105.1 135 51.1
arahy.Tifrunner.gnm1.ann1.HU28CX Arachis hypogaea HOM05D002202 ORTHO05D002176 8.6e-21 104.4 131 46.6
arahy.Tifrunner.gnm1.ann1.X6TLQR Arachis hypogaea HOM05D002202 ORTHO05D002176 2.5e-20 102.8 131 45.8
Manes.08G077300 Manihot esculenta HOM05D002202 ORTHO05D002176 8.6e-13 77.8 114 42.1
Manes.09G086500 Manihot esculenta HOM05D002202 ORTHO05D002176 8.6e-13 77.8 133 38.3
CAN.G807.3 Capsicum annuum HOM05D002202 ORTHO05D002176 4.7e-11 72.0 85 49.4
Gohir.D05G097900 Gossypium hirsutum HOM05D002202 ORTHO05D002176 2.3e-10 69.7 147 33.3
QL07p046827 Quercus lobata HOM05D002202 ORTHO05D002176 4.0e-10 68.9 82 48.8
QL07p046978 Quercus lobata HOM05D002202 ORTHO05D002176 4.0e-10 68.9 82 48.8
PGSC0003DMG400008933 Solanum tuberosum HOM05D002202 ORTHO05D002176 4.0e-10 68.9 83 49.4
Gohir.A05G097800 Gossypium hirsutum HOM05D002202 ORTHO05D002176 1.2e-09 67.4 147 32.7
Gorai.009G101500 Gossypium raimondii HOM05D002202 ORTHO05D002176 1.2e-09 67.4 147 32.7
Sp4g19790 Schrenkiella parvula HOM05D002202 ORTHO05D002176 4.4e-09 65.5 146 34.2
CSS0027045 Camellia sinensis var. sinensis HOM05D002202 ORTHO05D002176 5.8e-09 65.1 74 47.3
CSS0046989 Camellia sinensis var. sinensis HOM05D002202 ORTHO05D002176 5.8e-09 65.1 74 47.3
Solyc09g010350.4 Solanum lycopersicum HOM05D002202 ORTHO05D002176 7.5e-09 64.7 83 47.0
Sopen09g005080 Solanum pennellii HOM05D002202 ORTHO05D002176 7.5e-09 64.7 83 47.0
Dinv35643 Davidia involucrata HOM05D002202 ORTHO05D002176 1.3e-08 63.9 76 47.4
Gorai.010G140200 Gossypium raimondii HOM05D002202 ORTHO05D002176 2.9e-08 62.8 103 43.7
Peaxi162Scf00039g01013 Petunia axillaris HOM05D002202 ORTHO05D002176 3.7e-08 62.4 76 43.4
Actinidia13121 Actinidia chinensis HOM05D002202 ORTHO05D002176 4.9e-08 62.0 69 50.7
CiPaw.09G188200 Carya illinoinensis HOM05D002202 ORTHO05D002176 4.9e-08 62.0 76 46.1
Nitab4.5_0008142g0050 Nicotiana tabacum HOM05D002202 ORTHO05D002176 4.9e-08 62.0 76 46.1
Nitab4.5_0011862g0030 Nicotiana tabacum HOM05D002202 ORTHO05D002176 4.9e-08 62.0 76 46.1
Ah.09g237720 Amaranthus hybridus HOM05D002202 ORTHO05D002176 6.4e-08 61.6 85 45.9
Hma1.2p1_1481F.1_g286110 Hydrangea macrophylla HOM05D002202 ORTHO05D002176 6.4e-08 61.6 76 46.1
Hma1.2p1_1707F.1_g298460 Hydrangea macrophylla HOM05D002202 ORTHO05D002176 6.4e-08 61.6 76 46.1
Lj2A100G74 Lonicera japonica HOM05D002202 ORTHO05D002176 1.1e-07 60.8 57 54.4
Gohir.D13G093000 Gossypium hirsutum HOM05D002202 ORTHO05D002176 1.4e-07 60.5 107 43.9
BcaC02g11854 Brassica carinata HOM05D000296 ORTHO05D000175 1.9e-07 60.1 149 28.9
Gohir.A13G090300 Gossypium hirsutum HOM05D002202 ORTHO05D002176 3.2e-07 59.3 104 44.2
Haze_20735 Corylus avellana HOM05D002202 ORTHO05D002176 7.1e-07 58.2 97 39.2
Sc20g0004490 Simmondsia chinensis HOM05D002202 ORTHO05D002176 7.1e-07 58.2 87 42.5
Hma1.2p1_0035F.1_g022070 Hydrangea macrophylla HOM05D002202 ORTHO05D002176 9.2e-07 57.8 159 27.0
MD12G1137600 Malus domestica HOM05D002202 ORTHO05D002176 1.2e-06 57.4 83 47.0
TWI74G1658 Tripterygium wilfordii HOM05D002202 ORTHO05D002176 1.2e-06 57.4 145 31.0
Haze_24039 Corylus avellana HOM05D002202 ORTHO05D002176 2.1e-06 56.6 120 34.2
vmacro08674 Vaccinium macrocarpon HOM05D002202 ORTHO05D002176 2.1e-06 56.6 44 63.6
Cpa.g.sc163.28 Carica papaya HOM05D002202 ORTHO05D002176 2.7e-06 56.2 70 47.1
Duzib128G1287 Durio zibethinus HOM05D002202 ORTHO05D002176 3.5e-06 55.8 58 56.9
TWI77G0016 Tripterygium wilfordii HOM05D002202 ORTHO05D002176 3.5e-06 55.8 150 30.7
Thhalv10016612m.g Eutrema salsugineum HOM05D002202 ORTHO05D002176 4.6e-06 55.5 122 34.4
Lj2A1056T36 Lonicera japonica HOM05D002202 ORTHO05D002176 7.8e-06 54.7 91 36.3
Oeu051441.1 Olea europaea HOM05D002202 ORTHO05D002176 7.8e-06 54.7 108 34.3
Prupe.6G249500 Prunus persica HOM05D002202 ORTHO05D002176 7.8e-06 54.7 75 45.3
RcHm_v2.0_Chr3g0467441 Rosa chinensis HOM05D002202 ORTHO05D002176 7.8e-06 54.7 44 63.6


User provided reference genes

Program Settings