Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 2.3e-38 161.8 83 100.0
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 4.7e-31 137.5 83 86.7
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 4.7e-31 137.5 83 80.7
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 6.7e-30 133.7 80 78.8
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 1.5e-29 132.5 80 80.0
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 1.5e-29 132.5 83 79.5
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 2.0e-26 122.1 77 76.6
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 3.5e-26 121.3 77 77.9
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 5.0e-25 117.5 82 70.7
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 1.1e-24 116.3 83 72.3
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 1.5e-24 115.9 83 68.7
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 1.5e-24 115.9 77 74.0
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 1.9e-24 115.5 79 73.4
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 1.9e-24 115.5 83 72.3
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 2.5e-24 115.2 83 71.1
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 2.5e-24 115.2 83 71.1
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 3.2e-24 114.8 83 68.7
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 3.2e-24 114.8 83 66.3
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 5.5e-24 114.0 80 67.5
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 7.2e-24 113.6 83 68.7
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 1.2e-23 112.8 73 78.1
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 1.6e-23 112.5 75 74.7
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 2.7e-23 111.7 64 84.4
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 2.7e-23 111.7 83 71.1
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 3.6e-23 111.3 80 70.0
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 4.7e-23 110.9 80 70.0
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 4.7e-23 110.9 80 67.5
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 4.7e-23 110.9 80 67.5
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 1.8e-22 109.0 83 68.7
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 2.3e-22 108.6 83 66.3
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 2.3e-22 108.6 83 69.9
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 4.0e-22 107.8 81 65.4
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 4.0e-22 107.8 78 70.5
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 4.0e-22 107.8 80 67.5
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 6.7e-22 107.1 81 64.2
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 6.7e-22 107.1 83 65.1
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 6.7e-22 107.1 83 68.7
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 1.1e-21 106.3 80 66.2
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 1.5e-21 105.9 80 66.2
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 1.5e-21 105.9 80 66.2
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 3.3e-21 104.8 81 63.0
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 3.3e-21 104.8 81 61.7
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 3.3e-21 104.8 77 70.1
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 3.3e-21 104.8 83 67.5
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 4.4e-21 104.4 81 61.7
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 4.4e-21 104.4 75 69.3
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 5.7e-21 104.0 81 61.7
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 5.7e-21 104.0 78 65.4
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 5.7e-21 104.0 83 66.3
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 9.7e-21 103.2 71 70.4
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 1.3e-20 102.8 81 61.7
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 1.3e-20 102.8 83 62.7
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 1.7e-20 102.4 80 61.2
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 1.7e-20 102.4 78 61.5
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 1.7e-20 102.4 78 65.4
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 2.2e-20 102.1 79 62.0
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 2.2e-20 102.1 80 65.0
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 2.8e-20 101.7 81 60.5
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 6.3e-20 100.5 78 60.3
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 6.3e-20 100.5 81 61.7
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 1.1e-19 99.8 80 63.8
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 1.4e-19 99.4 79 59.5
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 1.8e-19 99.0 78 62.8
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 3.1e-19 98.2 64 75.0
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 3.1e-19 98.2 70 68.6
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 4.1e-19 97.8 78 59.0
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 5.3e-19 97.4 63 73.0
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 9.1e-19 96.7 75 60.0
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 1.6e-18 95.9 77 61.0
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 1.6e-18 95.9 74 62.2
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 2.0e-18 95.5 80 57.5
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 2.7e-18 95.1 65 70.8
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 2.7e-18 95.1 68 66.2
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 1.3e-17 92.8 75 61.3
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 1.7e-17 92.4 78 55.1
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 1.7e-17 92.4 80 62.5
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 2.2e-17 92.0 64 71.9
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 3.8e-17 91.3 66 63.6
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 1.5e-16 89.4 64 71.9
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 2.5e-16 88.6 81 59.3
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 5.5e-16 87.4 68 60.3
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 5.5e-16 87.4 68 60.3
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 1.6e-15 85.9 81 54.3
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 1.6e-15 85.9 81 54.3
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 1.6e-15 85.9 81 58.0
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 2.7e-15 85.1 65 64.6
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 1.0e-14 83.2 55 74.5
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 1.0e-14 83.2 67 68.7
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 1.4e-14 82.8 55 72.7
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 1.4e-14 82.8 78 59.0
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 4.0e-14 81.3 66 65.2
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 8.8e-14 80.1 61 60.7
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 3.4e-13 78.2 50 78.0
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 4.4e-13 77.8 56 67.9
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 7.5e-13 77.0 61 57.4
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 1.4e-11 72.8 56 62.5
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 4.1e-11 71.2 48 68.8
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 9.1e-11 70.1 52 59.6
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 1.9e-08 62.4 46 56.5
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 7.2e-08 60.5 58 51.7
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 6.1e-07 57.4 61 45.9


User provided reference genes

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