Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9264 Trifolium pratense HOM05D003700 ORTHO05D004160 4.0e-78 294.7 145 100.0
Ca_21822_v3 Cicer arietinum L. HOM05D003700 ORTHO05D004160 7.6e-37 157.5 89 80.9
Psat4g050880 Pisum sativum HOM05D003700 ORTHO05D004160 2.3e-33 146.0 85 77.6
Lalb_Chr07g0178061 Lupinus albus HOM05D003700 ORTHO05D004160 3.1e-30 135.6 150 50.0
Phvul.003G190000 Phaseolus vulgaris HOM05D003700 ORTHO05D004160 4.0e-30 135.2 108 62.0
Glyma.17G100300 Glycine max HOM05D003700 ORTHO05D004160 1.2e-29 133.7 111 60.4
Glyma.06G194200 Glycine max HOM05D003700 ORTHO05D004160 4.5e-29 131.7 95 68.4
Medtr0140s0050 Medicago truncatula HOM05D003700 ORTHO05D004160 4.5e-29 131.7 189 47.6
VMungo1215G2263 Vigna mungo HOM05D003700 ORTHO05D004160 4.5e-29 131.7 105 63.8
Phvul.009G187000 Phaseolus vulgaris HOM05D003700 ORTHO05D004160 5.8e-29 131.3 85 71.8
Glyma.04G169200 Glycine max HOM05D003700 ORTHO05D004160 9.9e-29 130.6 88 69.3
Ciclev10022133m.g Citrus clementina HOM05D003700 ORTHO05D004160 1.7e-28 129.8 89 68.5
Duzib205G1944 Durio zibethinus HOM05D003700 ORTHO05D004160 2.2e-28 129.4 107 60.7
Glyma.05G026600 Glycine max HOM05D003700 ORTHO05D004160 4.9e-28 128.3 112 58.0
Nn3g17245 Nelumbo nucifera HOM05D003700 ORTHO05D004160 4.9e-28 128.3 93 66.7
Lsat_1_v5_gn_1_13920 Lactuca sativa HOM05D003700 ORTHO05D004160 8.4e-28 127.5 109 62.4
Ca_13772_v3 Cicer arietinum L. HOM05D003700 ORTHO05D004160 1.1e-27 127.1 108 58.3
Cfa018940 Carpinus fangiana HOM05D003700 ORTHO05D004160 2.4e-27 125.9 92 63.0
COL.COLO4_35537 Corchorus olitorius HOM05D003700 ORTHO05D004160 2.4e-27 125.9 93 63.4
Nitab4.5_0007189g0070 Nicotiana tabacum HOM05D003700 ORTHO05D004160 3.2e-27 125.6 101 63.4
Cc04_g16600 Coffea canephora HOM05D003700 ORTHO05D004160 5.5e-27 124.8 92 66.3
Actinidia37626 Actinidia chinensis HOM05D003700 ORTHO05D004160 9.3e-27 124.0 88 67.0
TAR371G1074 Trochodendron aralioides HOM05D003700 ORTHO05D004160 1.6e-26 123.2 94 62.8
CANSAT56G3341 Cannabis sativa HOM05D003700 ORTHO05D004160 2.1e-26 122.9 91 64.8
Haze_07324 Corylus avellana HOM05D003700 ORTHO05D004160 2.1e-26 122.9 95 61.1
Lj4g0000044 Lotus japonicus HOM05D003700 ORTHO05D004160 2.1e-26 122.9 95 63.2
Nitab4.5_0011015g0030 Nicotiana tabacum HOM05D003700 ORTHO05D004160 2.1e-26 122.9 149 47.7
SGA_v2.0_scaffold114G31908 Striga asiatica HOM05D003700 ORTHO05D004160 2.1e-26 122.9 89 65.2
DCAR_016563 Daucus carota HOM05D003700 ORTHO05D004160 2.7e-26 122.5 85 68.2
SalBow7G0736 Salvia bowleyana HOM05D003700 ORTHO05D004160 2.7e-26 122.5 85 67.1
Thecc.03G087800 Theobroma cacao HOM05D003700 ORTHO05D004160 2.7e-26 122.5 91 64.8
unitig_62.g23549 Utricularia gibba HOM05D003700 ORTHO05D004160 3.5e-26 122.1 85 67.1
Lj1g0000196 Lotus japonicus HOM05D003700 ORTHO05D004160 4.6e-26 121.7 112 58.0
Atru.chr9.273 Acer truncatum HOM05D003700 ORTHO05D004160 6.0e-26 121.3 102 59.8
Peaxi162Scf00013g00333 Petunia axillaris HOM05D003700 ORTHO05D004160 6.0e-26 121.3 84 69.0
VMungo1309G1081 Vigna mungo HOM05D003700 ORTHO05D004160 6.0e-26 121.3 77 70.1
Actinidia04888 Actinidia chinensis HOM05D003700 ORTHO05D004160 7.9e-26 120.9 95 62.1
arahy.Tifrunner.gnm1.ann1.4WDU0A Arachis hypogaea HOM05D003700 ORTHO05D004160 7.9e-26 120.9 98 59.2
arahy.Tifrunner.gnm1.ann1.Y09UDZ Arachis hypogaea HOM05D003700 ORTHO05D004160 7.9e-26 120.9 92 62.0
Lj5A110T129 Lonicera japonica HOM05D003700 ORTHO05D004160 7.9e-26 120.9 92 66.3
Psat5g193120 Pisum sativum HOM05D003700 ORTHO05D004160 7.9e-26 120.9 96 56.2
Prupe.5G193800 Prunus persica HOM05D003700 ORTHO05D004160 7.9e-26 120.9 86 65.1
vmacro11460 Vaccinium macrocarpon HOM05D003700 ORTHO05D004160 7.9e-26 120.9 80 68.8
arahy.Tifrunner.gnm1.ann1.6Q68A3 Arachis hypogaea HOM05D003700 ORTHO05D004160 1.0e-25 120.6 98 59.2
MELO3C017173.2 Cucumis melo HOM05D003700 ORTHO05D004160 1.0e-25 120.6 89 66.3
QL10p017042 Quercus lobata HOM05D003700 ORTHO05D004160 1.0e-25 120.6 93 60.2
TPR.G11909 Trifolium pratense HOM05D003700 ORTHO05D004160 1.0e-25 120.6 109 56.0
ECA247G0346 Erigeron canadensis HOM05D003700 ORTHO05D004160 1.3e-25 120.2 80 66.2
Lalb_Chr08g0235721 Lupinus albus HOM05D003700 ORTHO05D004160 1.8e-25 119.8 88 62.5
HanXRQChr04g0107321 Helianthus annuus HOM05D003700 ORTHO05D004160 2.3e-25 119.4 165 44.2
arahy.Tifrunner.gnm1.ann1.N073K6 Arachis hypogaea HOM05D003700 ORTHO05D004160 3.9e-25 118.6 91 61.5
CiPaw.11G044800 Carya illinoinensis HOM05D003700 ORTHO05D004160 5.1e-25 118.2 86 61.6
Sed0020544 Sechium edule HOM05D003700 ORTHO05D004160 5.1e-25 118.2 90 62.2
SGA_v2.0_scaffold7G04064 Striga asiatica HOM05D003700 ORTHO05D004160 5.1e-25 118.2 85 65.9
Aqoxy3G03389 Aquilegia oxysepala HOM05D003700 ORTHO05D004160 6.7e-25 117.9 85 62.4
CAN.G587.1 Capsicum annuum HOM05D003700 ORTHO05D004160 6.7e-25 117.9 83 67.5
ClCG06G016210 Citrullus lanatus HOM05D003700 ORTHO05D004160 6.7e-25 117.9 89 66.3
CsaV3_1G002330 Cucumis sativus L. HOM05D003700 ORTHO05D004160 6.7e-25 117.9 89 65.2
Migut.D01816 Erythranthe guttata HOM05D003700 ORTHO05D004160 6.7e-25 117.9 87 64.4
THA.LOC104821421 Tarenaya hassleriana HOM05D003700 ORTHO05D004160 6.7e-25 117.9 77 64.9
HanXRQChr02g0043591 Helianthus annuus HOM05D003700 ORTHO05D004160 8.7e-25 117.5 147 48.3
Medtr3g435580 Medicago truncatula HOM05D003700 ORTHO05D004160 8.7e-25 117.5 98 58.2
Atru.chr11.2689 Acer truncatum HOM05D003700 ORTHO05D004160 1.1e-24 117.1 86 62.8
MD14G1200600 Malus domestica HOM05D003700 ORTHO05D004160 1.1e-24 117.1 106 57.5
Sc12g0006380 Simmondsia chinensis HOM05D003700 ORTHO05D004160 1.1e-24 117.1 95 56.8
TAR633G2224 Trochodendron aralioides HOM05D003700 ORTHO05D004160 1.1e-24 117.1 85 63.5
Lalb_Chr23g0273811 Lupinus albus HOM05D003700 ORTHO05D004160 1.5e-24 116.7 91 63.7
Oeu047295.1 Olea europaea HOM05D003700 ORTHO05D004160 1.5e-24 116.7 130 48.5
Hma1.2p1_1936F.1_g308180 Hydrangea macrophylla HOM05D003700 ORTHO05D004160 1.9e-24 116.3 95 60.0
Dinv19966 Davidia involucrata HOM05D003700 ORTHO05D004160 2.5e-24 115.9 95 58.9
PSO013G0046 Papaver somniferum HOM05D003700 ORTHO05D004160 2.5e-24 115.9 85 61.2
PSO832G2691 Papaver somniferum HOM05D003700 ORTHO05D004160 2.5e-24 115.9 85 61.2
TAR622G0031 Trochodendron aralioides HOM05D003700 ORTHO05D004160 2.5e-24 115.9 110 53.6
Eucgr.B00508 Eucalyptus grandis HOM05D003700 ORTHO05D004160 3.3e-24 115.5 91 63.7
Manes.06G092100 Manihot esculenta HOM05D003700 ORTHO05D004160 4.3e-24 115.2 77 67.5
Gohir.A03G066800 Gossypium hirsutum HOM05D003700 ORTHO05D004160 7.4e-24 114.4 81 61.7
GSVIVG01007999001 Vitis vinifera HOM05D003700 ORTHO05D004160 7.4e-24 114.4 86 62.8
Aa31LG11G1190 Aethionema arabicum HOM05D003700 ORTHO05D004160 9.6e-24 114.0 71 71.8
DCAR_021520 Daucus carota HOM05D003700 ORTHO05D004160 9.6e-24 114.0 86 65.1
MD06G1193500 Malus domestica HOM05D003700 ORTHO05D004160 9.6e-24 114.0 86 61.6
Sc04g0002660 Simmondsia chinensis HOM05D003700 ORTHO05D004160 9.6e-24 114.0 86 60.5
BcaB02g09647 Brassica carinata HOM05D003700 ORTHO05D004160 1.3e-23 113.6 71 70.4
Gohir.D03G093300 Gossypium hirsutum HOM05D003700 ORTHO05D004160 1.3e-23 113.6 81 60.5
PGSC0003DMG400033045 Solanum tuberosum HOM05D003700 ORTHO05D004160 1.3e-23 113.6 100 57.0
Hund02648 Selenicereus undatus HOM05D003700 ORTHO05D004160 2.1e-23 112.8 94 55.3
AL8G39330 Arabidopsis lyrata HOM05D003700 ORTHO05D004160 2.8e-23 112.5 71 69.0
EL10Ac5g11021 Beta vulgaris HOM05D003700 ORTHO05D004160 2.8e-23 112.5 90 60.0
Gohir.D11G035000 Gossypium hirsutum HOM05D003700 ORTHO05D004160 2.8e-23 112.5 99 58.6
Sp2g25630 Schrenkiella parvula HOM05D003700 ORTHO05D004160 2.8e-23 112.5 71 69.0
AT5G62440 Arabidopsis thaliana HOM05D003700 ORTHO05D004160 3.7e-23 112.1 71 69.0
Carub.0008s2312 Capsella rubella HOM05D003700 ORTHO05D004160 3.7e-23 112.1 71 69.0
CARHR276240 Cardamine hirsuta HOM05D003700 ORTHO05D004160 3.7e-23 112.1 71 69.0
Sed0006743 Sechium edule HOM05D003700 ORTHO05D004160 3.7e-23 112.1 145 44.8
Solyc03g116020.3 Solanum lycopersicum HOM05D003700 ORTHO05D004160 4.8e-23 111.7 77 63.6
HPP92_005935 Vanilla planifolia HOM05D003700 ORTHO05D004160 4.8e-23 111.7 96 58.3
ATR1127G116 Amborella trichopoda HOM05D003700 ORTHO05D004160 6.2e-23 111.3 94 54.3
MSTRG.9629 Avicennia marina HOM05D003700 ORTHO05D004160 6.2e-23 111.3 91 57.1
BcaB07g29837 Brassica carinata HOM05D003700 ORTHO05D004160 8.2e-23 110.9 71 67.6
Nitab4.5_0001128g0150 Nicotiana tabacum HOM05D003700 ORTHO05D004160 8.2e-23 110.9 77 64.9
TWI81G0244 Tripterygium wilfordii HOM05D003700 ORTHO05D004160 8.2e-23 110.9 96 58.3
BcaC01g02471 Brassica carinata HOM05D003700 ORTHO05D004160 1.1e-22 110.5 71 69.0
A06p29150 Brassica napus HOM05D003700 ORTHO05D004160 1.1e-22 110.5 71 69.0
C03p64440 Brassica napus HOM05D003700 ORTHO05D004160 1.1e-22 110.5 71 69.0
BolC3t18700H Brassica oleracea HOM05D003700 ORTHO05D004160 1.1e-22 110.5 71 69.0
BraA06t25863Z Brassica rapa HOM05D003700 ORTHO05D004160 1.1e-22 110.5 71 69.0
PGR083G2029 Punica granatum HOM05D003700 ORTHO05D004160 1.1e-22 110.5 80 65.0
PGSC0003DMG400019531 Solanum tuberosum HOM05D003700 ORTHO05D004160 1.1e-22 110.5 77 63.6
BcaC03g18149 Brassica carinata HOM05D003700 ORTHO05D004160 1.8e-22 109.8 71 66.2
A02p42310 Brassica napus HOM05D003700 ORTHO05D004160 1.8e-22 109.8 71 66.2
C02p62180 Brassica napus HOM05D003700 ORTHO05D004160 1.8e-22 109.8 71 66.2
BolC2t12276H Brassica oleracea HOM05D003700 ORTHO05D004160 1.8e-22 109.8 71 66.2
BraA02t09160Z Brassica rapa HOM05D003700 ORTHO05D004160 1.8e-22 109.8 71 66.2
FAN18G4275 Fragaria x ananassa HOM05D003700 ORTHO05D004160 1.8e-22 109.8 93 57.0
Gohir.A11G031331 Gossypium hirsutum HOM05D003700 ORTHO05D004160 1.8e-22 109.8 79 65.8
Sopen03g035010 Solanum pennellii HOM05D003700 ORTHO05D004160 1.8e-22 109.8 77 62.3
TAR381G1035 Trochodendron aralioides HOM05D003700 ORTHO05D004160 1.8e-22 109.8 86 62.8
FvH4_5g14920 Fragaria vesca HOM05D003700 ORTHO05D004160 2.4e-22 109.4 93 57.0
RcHm_v2.0_Chr7g0181461 Rosa chinensis HOM05D003700 ORTHO05D004160 2.4e-22 109.4 93 57.0
Solyc06g069770.3 Solanum lycopersicum HOM05D003700 ORTHO05D004160 2.4e-22 109.4 156 42.9
Sopen06g027060 Solanum pennellii HOM05D003700 ORTHO05D004160 2.4e-22 109.4 100 54.0
FAN08G2213 Fragaria x ananassa HOM05D003700 ORTHO05D004160 3.1e-22 109.0 92 57.6
Nitab4.5_0006000g0030 Nicotiana tabacum HOM05D003700 ORTHO05D004160 3.1e-22 109.0 77 64.9
Sabra05G0035300 Salix brachista HOM05D003700 ORTHO05D004160 3.1e-22 109.0 90 57.8
FAN04G3111 Fragaria x ananassa HOM05D003700 ORTHO05D004160 4.0e-22 108.6 93 55.9
FAN13G0273 Fragaria x ananassa HOM05D003700 ORTHO05D004160 4.0e-22 108.6 93 55.9
Aa31LG4G16330 Aethionema arabicum HOM05D003700 ORTHO05D004160 5.3e-22 108.2 87 59.8
Gohir.A11G031511 Gossypium hirsutum HOM05D003700 ORTHO05D004160 5.3e-22 108.2 79 64.6
Gorai.007G037700 Gossypium raimondii HOM05D003700 ORTHO05D004160 5.3e-22 108.2 79 64.6
FAN13G0167 Fragaria x ananassa HOM05D003700 ORTHO05D004160 6.9e-22 107.8 93 55.9
Gorai.003G097200 Gossypium raimondii HOM05D003700 ORTHO05D004160 6.9e-22 107.8 70 65.7
Potri.005G033100 Populus trichocarpa HOM05D003700 ORTHO05D004160 2.6e-21 105.9 75 62.7
CAN.G837.20 Capsicum annuum HOM05D003700 ORTHO05D004160 3.4e-21 105.5 77 61.0
Dinv38714 Davidia involucrata HOM05D003700 ORTHO05D004160 3.4e-21 105.5 72 66.7
Potri.013G022500 Populus trichocarpa HOM05D003700 ORTHO05D004160 4.5e-21 105.1 92 56.5
CDE08G0283 Ceratophyllum demersum HOM05D003700 ORTHO05D004160 1.0e-20 104.0 95 53.7
CDE04G0998 Ceratophyllum demersum HOM05D004763 ORTHO05D007492 3.8e-20 102.1 95 52.6
arahy.Tifrunner.gnm1.ann1.L6WE06 Arachis hypogaea HOM05D003700 ORTHO05D004160 4.9e-20 101.7 91 52.7
MBI17_g39902_MAGBIO Magnolia biondii HOM05D003700 ORTHO05D004160 6.5e-20 101.3 92 51.1
Gorai.007G037600 Gossypium raimondii HOM05D003700 ORTHO05D004160 8.4e-20 100.9 97 54.6
Sabra13G0024600 Salix brachista HOM05D003700 ORTHO05D004160 8.4e-20 100.9 80 58.8
Gohir.D11G034700 Gossypium hirsutum HOM05D003700 ORTHO05D004160 2.5e-19 99.4 99 53.5
TAR622G0407 Trochodendron aralioides HOM05D003700 ORTHO05D004160 2.5e-19 99.4 86 59.3
Os03g0187000 Oryza sativa ssp. japonica HOM05D003700 ORTHO05D004160 5.5e-19 98.2 92 50.0
Ca_05341_v3 Cicer arietinum L. HOM05D003700 ORTHO05D004160 7.1e-19 97.8 56 80.4
Potri.013G021800 Populus trichocarpa HOM05D003700 ORTHO05D004160 7.1e-19 97.8 100 50.0
Zm00001eb401550 Zea mays HOM05D003700 ORTHO05D004160 7.1e-19 97.8 74 59.5
Zm00001eb006550 Zea mays HOM05D003700 ORTHO05D004160 3.5e-18 95.5 94 50.0
SEGI_41222 Sequoiadendron giganteum HOM05D003700 ORTHO05D004160 6.0e-18 94.7 71 57.7
Cpa.g.sc111.10 Carica papaya HOM05D003700 ORTHO05D004160 2.5e-16 89.4 99 48.5
arahy.Tifrunner.gnm1.ann1.DV8NSN Arachis hypogaea HOM05D003700 ORTHO05D004160 3.3e-16 89.0 91 48.4
arahy.Tifrunner.gnm1.ann1.G7C7PJ Arachis hypogaea HOM05D003700 ORTHO05D004160 3.3e-16 89.0 94 48.9
arahy.Tifrunner.gnm1.ann1.H69J8I Arachis hypogaea HOM05D003700 ORTHO05D004160 3.3e-16 89.0 94 48.9
Mapoly0139s0003 Marchantia polymorpha HOM05D003700 ORTHO05D004160 5.7e-16 88.2 70 48.6
SMO141G0011 Selaginella moellendorffii HOM05D003700 ORTHO05D004160 7.4e-16 87.8 69 53.6
Rhsim07G0194700 Rhododendron simsii HOM05D003700 ORTHO05D004160 8.2e-15 84.3 70 61.4
Pp3c20_9520 Physcomitrium patens HOM05D003700 ORTHO05D004160 5.3e-14 81.6 92 42.4
AUR62008420 Chenopodium quinoa HOM05D003700 ORTHO05D004160 6.9e-14 81.3 60 56.7
Pp3c23_7150 Physcomitrium patens HOM05D003700 ORTHO05D004160 6.9e-14 81.3 94 40.4
AUR62021675 Chenopodium quinoa HOM05D003700 ORTHO05D004160 1.2e-13 80.5 59 57.6
AagrBONN_evm.TU.Sc2ySwM_228.5404 Anthoceros agrestis HOM05D003700 ORTHO05D004160 2.6e-13 79.3 67 47.8
Pp3c10_17790 Physcomitrium patens HOM05D003700 ORTHO05D004160 2.6e-13 79.3 96 42.7
CBR_g38730 Chara braunii HOM05D003700 ORTHO05D004160 1.3e-12 77.0 92 41.3
CBR_g54107 Chara braunii HOM05D003700 ORTHO05D004160 3.8e-12 75.5 91 40.7
CAN.G310.1 Capsicum annuum HOM05D003700 ORTHO05D004160 8.5e-12 74.3 94 46.8
Nitab4.5_0002078g0040 Nicotiana tabacum HOM05D003700 ORTHO05D004160 1.1e-11 73.9 85 52.9
A09p07680 Brassica napus HOM05D003700 ORTHO05D004160 5.5e-11 71.6 56 60.7
C09p08590 Brassica napus HOM05D003700 ORTHO05D004160 7.2e-11 71.2 59 57.6
BraA09t36419Z Brassica rapa HOM05D003700 ORTHO05D004160 1.6e-10 70.1 57 57.9
PRCOL_00000129 Prasinoderma coloniale HOM05D003700 ORTHO05D004160 2.7e-10 69.3 92 39.1
BolC9t53768H Brassica oleracea HOM05D003700 ORTHO05D004160 7.9e-10 67.8 64 53.1
MCO11G674 Micromonas commoda HOM05D003700 ORTHO05D004160 1.4e-09 67.0 65 41.5
Rhsim08G0137200 Rhododendron simsii HOM05D003700 ORTHO05D004160 3.9e-09 65.5 62 56.5
BcaC04g23414 Brassica carinata HOM05D003700 ORTHO05D004160 4.3e-08 62.0 82 47.6
Cre02.g085950 Chlamydomonas reinhardtii HOM05D003700 ORTHO05D004160 9.7e-08 60.8 98 37.8
TPR.G15244 Trifolium pratense HOM05D003700 ORTHO05D004160 1.3e-07 60.5 32 100.0
Pp3c24_12900 Physcomitrium patens HOM05D003700 ORTHO05D004160 2.8e-07 59.3 94 33.0
Zm00001eb207920 Zea mays HOM05D000228 ORTHO05D004880 2.4e-06 56.2 63 36.5
FvH4_7g03040 Fragaria vesca HOM05D000228 ORTHO05D004880 9.1e-06 54.3 76 34.2
FAN01G1291 Fragaria x ananassa HOM05D000228 ORTHO05D004880 9.1e-06 54.3 76 34.2
FAN03G2523 Fragaria x ananassa HOM05D000228 ORTHO05D004880 9.1e-06 54.3 76 34.2
FAN06G4504 Fragaria x ananassa HOM05D000228 ORTHO05D004880 9.1e-06 54.3 76 34.2
FAN10G2136 Fragaria x ananassa HOM05D000228 ORTHO05D002228 9.1e-06 54.3 76 32.9
FAN10G2682 Fragaria x ananassa HOM05D000228 ORTHO05D004880 9.1e-06 54.3 76 32.9


User provided reference genes

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