Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 9.2e-212 740.0 374 100.0
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 1.5e-198 696.0 374 93.3
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 3.4e-198 694.9 374 93.0
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 4.9e-197 691.0 374 93.6
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 1.9e-185 652.5 374 86.6
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 7.4e-185 650.6 374 86.4
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 7.4e-185 650.6 374 86.9
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 9.6e-185 650.2 374 86.6
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 1.5e-182 642.9 374 86.1
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 7.6e-182 640.6 373 85.8
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 7.6e-174 614.0 384 81.0
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 1.9e-172 609.4 384 80.2
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 4.5e-166 588.2 373 79.4
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 3.9e-162 575.1 372 77.2
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 1.5e-161 573.2 372 77.4
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 6.5e-157 557.8 375 74.4
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 1.5e-153 546.6 373 73.2
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 1.3e-152 543.5 369 74.0
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 1.3e-152 543.5 369 74.0
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 2.8e-152 542.3 368 71.5
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 8.2e-152 540.8 372 71.5
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 1.4e-151 540.0 368 73.9
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 1.4e-151 540.0 370 70.8
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 1.8e-151 539.7 371 73.0
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 2.4e-151 539.3 361 74.5
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 4.1e-151 538.5 371 72.8
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 2.0e-150 536.2 370 70.3
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 3.5e-150 535.4 372 72.0
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 7.7e-150 534.3 419 66.3
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 3.2e-148 528.9 370 72.7
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 9.4e-148 527.3 370 72.7
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 9.4e-148 527.3 372 71.0
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 1.6e-147 526.6 370 71.4
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 3.6e-147 525.4 369 71.0
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 4.7e-147 525.0 370 69.7
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 1.0e-146 523.9 370 71.4
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 2.3e-146 522.7 368 73.1
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 1.2e-145 520.4 311 80.4
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 1.5e-145 520.0 374 70.6
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 4.4e-145 518.5 318 79.6
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 5.7e-145 518.1 363 71.6
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 9.7e-145 517.3 364 71.4
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 1.7e-144 516.5 340 73.8
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 1.7e-144 516.5 318 79.2
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 1.7e-144 516.5 374 71.7
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 2.2e-144 516.2 373 69.4
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 3.7e-144 515.4 347 72.9
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 6.3e-144 514.6 373 67.8
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 7.0e-143 511.1 374 70.6
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 1.6e-142 510.0 374 68.7
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 5.9e-142 508.1 371 69.0
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 1.7e-141 506.5 368 70.4
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 3.8e-141 505.4 371 68.5
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 6.5e-141 504.6 376 68.1
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 1.1e-140 503.8 369 68.8
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 1.1e-140 503.8 373 67.8
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 1.5e-140 503.4 371 68.7
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 1.9e-140 503.1 365 69.0
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 4.2e-140 501.9 375 67.5
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 5.5e-140 501.5 369 68.6
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 1.2e-139 500.4 369 68.6
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 8.0e-139 497.7 359 68.8
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 1.0e-138 497.3 313 76.4
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 2.3e-138 496.1 374 69.5
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 2.3e-138 496.1 363 68.0
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 3.0e-138 495.7 357 69.2
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 3.0e-138 495.7 375 69.6
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 5.2e-138 495.0 368 68.8
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 2.0e-137 493.0 315 74.9
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.6e-137 492.7 303 78.2
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 4.4e-137 491.9 377 67.4
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 4.4e-137 491.9 375 65.9
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 5.7e-137 491.5 353 69.7
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 5.7e-137 491.5 380 65.0
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 5.7e-137 491.5 374 67.4
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 9.8e-137 490.7 375 67.5
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 2.4e-135 486.1 329 71.7
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 9.1e-135 484.2 379 64.9
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 2.9e-133 479.2 373 66.5
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 3.3e-132 475.7 285 79.6
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 6.1e-131 471.5 334 71.9
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 1.4e-130 470.3 383 63.4
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 7.5e-129 464.5 282 80.1
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 2.8e-128 462.6 334 69.2
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 3.1e-127 459.1 298 75.8
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 4.1e-127 458.8 371 61.5
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 1.7e-125 453.4 279 78.5
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 1.9e-124 449.9 330 67.3
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 4.0e-122 442.2 461 53.6
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 1.1e-111 407.5 346 60.4
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 5.1e-109 398.7 249 78.7
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 1.3e-101 374.0 316 59.2
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.7e-101 373.6 271 66.8
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 6.2e-99 365.2 324 56.5
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 6.2e-99 365.2 324 56.5
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 4.9e-96 355.5 231 74.5
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 6.0e-94 348.6 263 63.9
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 3.6e-91 339.3 205 82.4
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 3.8e-88 329.3 275 58.9
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 3.0e-85 319.7 253 61.3
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 3.2e-55 219.9 168 60.1
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 1.1e-52 211.5 162 62.3
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 2.2e-48 197.2 150 64.0
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 3.1e-42 176.8 174 48.3
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 2.5e-39 167.2 125 69.6
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 1.1e-34 151.8 149 55.0
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 8.5e-32 142.1 126 57.1
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 8.3e-27 125.6 104 51.0
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 1.3e-24 118.2 85 72.9
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.0e-20 104.4 133 45.9
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 1.1e-18 98.6 84 59.5
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 5.6e-07 59.7 48 64.6
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 5.6e-07 59.7 48 64.6


User provided reference genes

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