Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9242 Trifolium pratense HOM05D007665 ORTHO05D008293 3.4e-152 541.6 265 100.0
Medtr2g036740 Medicago truncatula HOM05D007665 ORTHO05D008293 1.2e-117 426.8 269 81.8
Psat1g146200 Pisum sativum HOM05D007665 ORTHO05D008293 1.2e-93 347.1 272 73.5
Glyma.15G163200 Glycine max HOM05D007665 ORTHO05D008293 3.2e-81 305.8 306 59.5
Lj6g0002099 Lotus japonicus HOM05D007665 ORTHO05D008293 4.1e-81 305.4 300 60.3
VMungo1309G2535 Vigna mungo HOM05D007665 ORTHO05D008293 4.6e-80 302.0 311 55.9
Phvul.009G238500 Phaseolus vulgaris HOM05D007665 ORTHO05D008293 3.9e-79 298.9 307 57.7
Lalb_Chr18g0052461 Lupinus albus HOM05D007665 ORTHO05D008293 2.3e-76 289.7 298 58.7
Glyma.09G056900 Glycine max HOM05D007665 ORTHO05D008293 5.2e-76 288.5 307 57.3
Phvul.003G143500 Phaseolus vulgaris HOM05D007665 ORTHO05D008293 3.0e-63 246.1 295 49.8
VMungo1215G3214 Vigna mungo HOM05D007665 ORTHO05D008293 1.4e-60 237.3 300 49.7
Glyma.13G098200 Glycine max HOM05D007665 ORTHO05D008293 9.9e-59 231.1 278 50.7
Glyma.17G061500 Glycine max HOM05D007665 ORTHO05D008293 2.2e-58 229.9 278 51.1
Lalb_Chr15g0084041 Lupinus albus HOM05D007665 ORTHO05D008293 1.4e-49 200.7 233 54.9
QL11p005089 Quercus lobata HOM05D007665 ORTHO05D008293 1.4e-49 200.7 298 42.6
CANSAT11G1651 Cannabis sativa HOM05D007665 ORTHO05D008293 5.4e-49 198.7 287 43.6
RcHm_v2.0_Chr4g0400841 Rosa chinensis HOM05D007665 ORTHO05D008293 2.7e-48 196.4 308 43.2
Lj4g0023476 Lotus japonicus HOM05D007665 ORTHO05D008293 2.3e-47 193.4 233 50.2
FAN07G1410 Fragaria x ananassa HOM05D007665 ORTHO05D008293 3.0e-47 193.0 306 43.1
FvH4_4g07760 Fragaria vesca HOM05D007665 ORTHO05D008293 1.5e-46 190.7 306 42.5
FAN12G1950 Fragaria x ananassa HOM05D007665 ORTHO05D008293 1.5e-46 190.7 306 42.5
FAN17G2593 Fragaria x ananassa HOM05D007665 ORTHO05D008293 1.9e-46 190.3 306 42.2
arahy.Tifrunner.gnm1.ann1.6P3KM7 Arachis hypogaea HOM05D007665 ORTHO05D008293 5.6e-46 188.7 311 45.0
CiPaw.08G034700 Carya illinoinensis HOM05D007665 ORTHO05D008293 1.3e-45 187.6 296 42.6
arahy.Tifrunner.gnm1.ann1.D7NBKG Arachis hypogaea HOM05D007665 ORTHO05D008293 1.6e-45 187.2 312 45.2
CiPaw.07G194500 Carya illinoinensis HOM05D007665 ORTHO05D008293 1.6e-45 187.2 300 41.7
FAN22G0501 Fragaria x ananassa HOM05D007665 ORTHO05D008293 2.1e-45 186.8 306 41.5
Prupe.1G081700 Prunus persica HOM05D007665 ORTHO05D008293 8.1e-45 184.9 298 41.3
ClCG06G013480 Citrullus lanatus HOM05D007665 ORTHO05D008293 3.1e-44 183.0 306 40.2
Potri.018G090000 Populus trichocarpa HOM05D007665 ORTHO05D008293 3.1e-44 183.0 291 41.9
MD16G1253900 Malus domestica HOM05D007665 ORTHO05D008293 4.0e-44 182.6 299 41.5
Cfa013407 Carpinus fangiana HOM05D007665 ORTHO05D008293 2.0e-43 180.3 302 41.7
TWI34G1272 Tripterygium wilfordii HOM05D007665 ORTHO05D008293 2.0e-43 180.3 286 40.6
COL.COLO4_35626 Corchorus olitorius HOM05D007665 ORTHO05D008293 9.9e-43 177.9 297 39.7
Duzib150G0483 Durio zibethinus HOM05D007665 ORTHO05D008293 1.1e-41 174.5 302 39.4
Sed0009659 Sechium edule HOM05D007665 ORTHO05D008293 1.1e-41 174.5 292 39.7
arahy.Tifrunner.gnm1.ann1.38WMVK Arachis hypogaea HOM05D007665 ORTHO05D008293 3.2e-41 172.9 279 41.9
Dinv19563 Davidia involucrata HOM05D007665 ORTHO05D008293 1.6e-40 170.6 275 40.7
arahy.Tifrunner.gnm1.ann1.HIJU8F Arachis hypogaea HOM05D007665 ORTHO05D008293 2.1e-40 170.2 276 41.7
Manes.06G022200 Manihot esculenta HOM05D007665 ORTHO05D008293 4.6e-40 169.1 293 40.6
Lalb_Chr12g0199491 Lupinus albus HOM05D007665 ORTHO05D008293 3.9e-39 166.0 264 44.7
Potri.006G165500 Populus trichocarpa HOM05D007665 ORTHO05D008293 8.7e-39 164.9 286 40.9
Sabra06G0127300 Salix brachista HOM05D007665 ORTHO05D008293 3.3e-38 162.9 293 39.6
MELO3C017449.2 Cucumis melo HOM05D007665 ORTHO05D008293 4.3e-38 162.5 317 37.5
CsaV3_1G031740 Cucumis sativus L. HOM05D007665 ORTHO05D008293 7.4e-38 161.8 318 38.4
MD13G1247000 Malus domestica HOM05D007665 ORTHO05D008293 2.1e-37 160.2 241 43.2
Gohir.D08G093300 Gossypium hirsutum HOM05D007665 ORTHO05D008293 1.4e-36 157.5 301 39.2
Ciclev10009102m.g Citrus clementina HOM05D007665 ORTHO05D008293 1.8e-36 157.1 299 41.5
Cpa.g.c26900 Carica papaya HOM05D007665 ORTHO05D008293 1.2e-35 154.5 311 37.6
Thecc.09G178300 Theobroma cacao HOM05D007665 ORTHO05D008293 4.5e-35 152.5 301 39.2
Gorai.004G098900 Gossypium raimondii HOM05D007665 ORTHO05D008293 7.6e-35 151.8 300 38.7
Atru.chr7.835 Acer truncatum HOM05D007665 ORTHO05D008293 1.3e-34 151.0 296 41.6
Sed0009111 Sechium edule HOM05D007665 ORTHO05D008293 2.9e-34 149.8 287 38.0
TWI32G1073 Tripterygium wilfordii HOM05D007665 ORTHO05D008293 3.2e-33 146.4 286 36.0
Sabra18G0077500 Salix brachista HOM05D007665 ORTHO05D008293 3.5e-32 142.9 304 37.2
Gohir.A08G083600 Gossypium hirsutum HOM05D007665 ORTHO05D008293 4.6e-32 142.5 299 37.1
Haze_21953 Corylus avellana HOM05D007665 ORTHO05D008293 1.9e-30 137.1 190 43.7
TPR.G5363 Trifolium pratense HOM05D007665 ORTHO05D008293 1.9e-30 137.1 272 39.7
Manes.14G158020 Manihot esculenta HOM05D007665 ORTHO05D008293 3.3e-30 136.3 310 35.5
Eucgr.C00139 Eucalyptus grandis HOM05D007665 ORTHO05D008293 2.1e-29 133.7 290 36.9
Ca_21241_v3 Cicer arietinum L. HOM05D007665 ORTHO05D008293 5.3e-28 129.0 219 44.3
Hma1.2p1_1303F.1_g274400 Hydrangea macrophylla HOM05D007665 ORTHO05D008293 5.0e-26 122.5 311 32.2
Rhsim01G0002100 Rhododendron simsii HOM05D007665 ORTHO05D008293 7.1e-25 118.6 295 33.9
TAR625G0485 Trochodendron aralioides HOM05D007665 ORTHO05D008293 2.3e-23 113.6 324 32.7
Medtr4g127680 Medicago truncatula HOM05D007665 ORTHO05D008293 3.0e-23 113.2 197 40.1
GSVIVG01029234001 Vitis vinifera HOM05D007665 ORTHO05D008293 1.1e-22 111.3 233 34.3
Gohir.A08G019000 Gossypium hirsutum HOM05D007665 ORTHO05D008293 1.9e-22 110.5 207 39.6
Lalb_Chr13g0300111 Lupinus albus HOM05D007665 ORTHO05D008293 1.9e-22 110.5 210 39.5
Gorai.004G027000 Gossypium raimondii HOM05D007665 ORTHO05D008293 6.3e-21 105.5 207 38.2
PGR142G3274 Punica granatum HOM05D007665 ORTHO05D008293 8.2e-21 105.1 289 31.1
Psat0s2178g0120 Pisum sativum HOM05D007665 ORTHO05D008293 5.9e-19 99.0 211 36.0
BcaC04g19976 Brassica carinata HOM05D010683 ORTHO05D008293 7.7e-19 98.6 218 35.3
A02p08580 Brassica napus HOM05D010683 ORTHO05D008293 7.7e-19 98.6 275 31.6
C09p49230 Brassica napus HOM05D010683 ORTHO05D008293 7.7e-19 98.6 218 35.3
BolC9t57773H Brassica oleracea HOM05D010683 ORTHO05D008293 7.7e-19 98.6 218 35.3
BraA02t05927Z Brassica rapa HOM05D010683 ORTHO05D008293 7.7e-19 98.6 275 31.6
THA.LOC104811782 Tarenaya hassleriana HOM05D007665 ORTHO05D008293 1.0e-18 98.2 290 31.0
A10p14800 Brassica napus HOM05D010683 ORTHO05D008293 1.3e-18 97.8 216 32.9
Actinidia01304 Actinidia chinensis HOM05D007665 ORTHO05D008293 3.8e-18 96.3 312 28.8
Gohir.A05G003700 Gossypium hirsutum HOM05D007665 ORTHO05D008293 6.5e-18 95.5 271 31.4
BcaB08g36093 Brassica carinata HOM05D010683 ORTHO05D008293 1.1e-17 94.7 281 29.9
Cc06_g13100 Coffea canephora HOM05D007665 ORTHO05D008293 3.2e-17 93.2 297 31.3
Gorai.009G003800 Gossypium raimondii HOM05D007665 ORTHO05D008293 1.0e-15 88.2 270 30.7
Gohir.D05G004100 Gossypium hirsutum HOM05D007665 ORTHO05D008293 3.0e-15 86.7 205 36.1
Sp6g19060 Schrenkiella parvula HOM05D010683 ORTHO05D008293 5.1e-15 85.9 279 29.0
MBI16_g38083_MAGBIO Magnolia biondii HOM05D007665 ORTHO05D008293 1.5e-14 84.3 338 28.7
Solyc07g017870.2 Solanum lycopersicum HOM05D023392 ORTHO05D008293 2.5e-14 83.6 224 33.9
CARHR271130 Cardamine hirsuta HOM05D010683 ORTHO05D008293 4.3e-14 82.8 218 30.7
MSTRG.6233 Avicennia marina HOM05D007665 ORTHO05D008293 7.4e-14 82.0 222 35.6
Carub.0008s1785 Capsella rubella HOM05D010683 ORTHO05D008293 1.3e-13 81.3 287 28.2
Thhalv10014550m.g Eutrema salsugineum HOM05D010683 ORTHO05D008293 1.7e-13 80.9 279 28.3
AL8G33310 Arabidopsis lyrata HOM05D010683 ORTHO05D008293 8.2e-13 78.6 283 28.3
BcaC03g14162 Brassica carinata HOM05D010683 ORTHO05D008293 8.2e-13 78.6 222 32.4
AT5G57340 Arabidopsis thaliana HOM05D010683 ORTHO05D008293 1.1e-12 78.2 244 29.9
Aqoxy7G02985 Aquilegia oxysepala HOM05D007665 ORTHO05D008293 1.8e-12 77.4 276 29.0
C02p14330 Brassica napus HOM05D010683 ORTHO05D008293 6.9e-12 75.5 222 32.0
BolC2t07559H Brassica oleracea HOM05D010683 ORTHO05D008293 6.9e-12 75.5 222 32.0
THA.LOC104813513 Tarenaya hassleriana HOM05D007665 ORTHO05D008293 3.4e-11 73.2 219 29.7
ATR0580G179 Amborella trichopoda HOM05D007665 ORTHO05D008293 5.0e-10 69.3 314 24.5
BcaB05g22338 Brassica carinata HOM05D010683 ORTHO05D008293 5.0e-10 69.3 217 30.9
Gohir.D08G029600 Gossypium hirsutum HOM05D007665 ORTHO05D008293 5.0e-10 69.3 159 37.1
DCAR_009919 Daucus carota HOM05D007665 ORTHO05D008293 1.1e-09 68.2 230 30.4
Peaxi162Scf01054g00014 Petunia axillaris HOM05D023392 ORTHO05D008293 2.5e-09 67.0 218 33.5
ATR0030G044 Amborella trichopoda HOM05D004032 ORTHO05D004462 7.2e-09 65.5 181 29.3
PSO063G5967 Papaver somniferum HOM05D007665 ORTHO05D008293 9.4e-09 65.1 226 28.8
Aa31LG3G13210 Aethionema arabicum HOM05D010683 ORTHO05D008293 2.7e-08 63.5 216 28.7
Oeu056507.1 Olea europaea HOM05D007665 ORTHO05D008293 4.7e-08 62.8 136 38.2
Lsat_1_v5_gn_5_85601 Lactuca sativa HOM05D007665 ORTHO05D008293 1.8e-07 60.8 213 27.7
PSO170G3678 Papaver somniferum HOM05D007665 ORTHO05D008293 2.3e-07 60.5 135 35.6
HPP92_018370 Vanilla planifolia HOM05D007665 ORTHO05D008293 3.9e-07 59.7 250 28.0
PGSC0003DMG400004091 Solanum tuberosum HOM05D023392 ORTHO05D008293 1.5e-06 57.8 196 30.6
Peaxi162Scf00264g00213 Petunia axillaris HOM05D004032 ORTHO05D004462 2.0e-06 57.4 161 26.7


User provided reference genes

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