Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9240 Trifolium pratense HOM05D007765 ORTHO05D009826 2.6e-92 342.0 176 100.0
Medtr2g036670 Medicago truncatula HOM05D007765 ORTHO05D009826 7.7e-76 287.3 175 85.1
VMungo1309G2639 Vigna mungo HOM05D007765 ORTHO05D009826 5.4e-45 184.9 196 57.1
Glyma.09G056600 Glycine max HOM05D007765 ORTHO05D009826 1.6e-41 173.3 206 52.4
Glyma.15G162800 Glycine max HOM05D007765 ORTHO05D009826 4.7e-41 171.8 193 53.9
Lj4g0004123 Lotus japonicus HOM05D007765 ORTHO05D009826 3.1e-40 169.1 203 52.2
Phvul.009G238800 Phaseolus vulgaris HOM05D007765 ORTHO05D009826 5.2e-40 168.3 197 55.3
Lalb_Chr20g0116301 Lupinus albus HOM05D007765 ORTHO05D009826 1.5e-39 166.8 211 47.9
Lalb_Chr18g0052451 Lupinus albus HOM05D007765 ORTHO05D009826 4.4e-39 165.2 180 55.0
Phvul.003G143700 Phaseolus vulgaris HOM05D007765 ORTHO05D009826 1.3e-38 163.7 206 49.5
Lalb_Chr12g0199471 Lupinus albus HOM05D007765 ORTHO05D009826 4.9e-38 161.8 175 51.4
Glyma.13G098000 Glycine max HOM05D007765 ORTHO05D009826 1.9e-37 159.8 202 48.5
Glyma.17G061700 Glycine max HOM05D007765 ORTHO05D009826 4.1e-37 158.7 200 49.5
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 1.6e-36 156.8 174 51.7
Psat1g146600 Pisum sativum HOM05D007765 ORTHO05D009826 5.1e-35 151.8 99 79.8
TPR.G5381 Trifolium pratense HOM05D007765 ORTHO05D009826 6.6e-35 151.4 171 51.5
Lj6g0023329 Lotus japonicus HOM05D007765 ORTHO05D009826 2.5e-34 149.4 175 50.9
arahy.Tifrunner.gnm1.ann1.8SXC5S Arachis hypogaea HOM05D007765 ORTHO05D009826 5.6e-34 148.3 176 52.3
arahy.Tifrunner.gnm1.ann1.YM1G3Q Arachis hypogaea HOM05D007765 ORTHO05D009826 1.8e-32 143.3 187 49.2
Medtr4g127700 Medicago truncatula HOM05D007765 ORTHO05D009826 2.0e-31 139.8 169 49.7
Dinv41219 Davidia involucrata HOM05D007765 ORTHO05D009826 1.5e-23 113.6 201 39.8
Duzib150G0923 Durio zibethinus HOM05D007765 ORTHO05D009826 2.0e-23 113.2 223 35.0
COL.COLO4_36375 Corchorus olitorius HOM05D007765 ORTHO05D009826 4.4e-23 112.1 193 39.4
CiPaw.07G194200 Carya illinoinensis HOM05D007765 ORTHO05D009826 5.8e-23 111.7 221 35.3
VMungo1215G1692 Vigna mungo HOM05D007765 ORTHO05D009826 2.2e-22 109.8 154 45.5
Gohir.D13G216400 Gossypium hirsutum HOM05D007765 ORTHO05D009826 6.4e-22 108.2 170 40.0
Gorai.013G246700 Gossypium raimondii HOM05D007765 ORTHO05D009826 8.4e-22 107.8 170 40.0
TAR383G0713 Trochodendron aralioides HOM05D007765 ORTHO05D009826 1.4e-21 107.1 220 35.0
Gohir.A13G212300 Gossypium hirsutum HOM05D007765 ORTHO05D009826 2.4e-21 106.3 170 39.4
QL11p005142 Quercus lobata HOM05D007765 ORTHO05D009826 4.2e-21 105.5 217 36.4
RcHm_v2.0_Chr4g0400891 Rosa chinensis HOM05D007765 ORTHO05D009826 5.4e-21 105.1 193 39.4
MBI14_g08141_MAGBIO Magnolia biondii HOM05D007765 ORTHO05D009826 7.1e-21 104.8 227 33.5
Atru.chr7.847 Acer truncatum HOM05D007765 ORTHO05D009826 1.6e-20 103.6 206 36.9
Sabra18G0077700 Salix brachista HOM05D007765 ORTHO05D009826 2.1e-20 103.2 213 37.1
Sp3g32420 Schrenkiella parvula HOM05D007765 ORTHO05D009826 4.6e-20 102.1 174 40.2
FAN17G2229 Fragaria x ananassa HOM05D007765 ORTHO05D009826 6.0e-20 101.7 203 35.0
Carub.0003s3320 Capsella rubella HOM05D007765 ORTHO05D009826 2.3e-19 99.8 179 38.0
THA.LOC104803946 Tarenaya hassleriana HOM05D007765 ORTHO05D009826 2.3e-19 99.8 186 40.3
FAN22G0698 Fragaria x ananassa HOM05D007765 ORTHO05D009826 3.0e-19 99.4 203 35.5
Potri.018G090200 Populus trichocarpa HOM05D007765 ORTHO05D009826 3.0e-19 99.4 212 35.4
AL3G52940 Arabidopsis lyrata HOM05D007765 ORTHO05D009826 3.9e-19 99.0 170 38.2
Carub.0007s1043 Capsella rubella HOM05D007765 ORTHO05D009826 3.9e-19 99.0 168 39.9
Thhalv10022885m.g Eutrema salsugineum HOM05D007765 ORTHO05D009826 1.9e-18 96.7 174 39.1
THA.LOC104819971 Tarenaya hassleriana HOM05D007765 ORTHO05D009826 2.5e-18 96.3 183 38.8
AT2G18969 Arabidopsis thaliana HOM05D007765 ORTHO05D009826 5.6e-18 95.1 170 37.6
BolC9t54340H Brassica oleracea HOM05D007765 ORTHO05D009826 5.6e-18 95.1 179 39.7
CARHR238080 Cardamine hirsuta HOM05D007765 ORTHO05D009826 5.6e-18 95.1 170 37.1
A09p12150 Brassica napus HOM05D007765 ORTHO05D009826 7.3e-18 94.7 179 39.1
C09p14370 Brassica napus HOM05D007765 ORTHO05D009826 7.3e-18 94.7 179 39.1
BraA09t36859Z Brassica rapa HOM05D007765 ORTHO05D009826 7.3e-18 94.7 179 39.1
FvH4_4g07800 Fragaria vesca HOM05D007765 ORTHO05D009826 9.6e-18 94.4 204 34.3
FAN07G1496 Fragaria x ananassa HOM05D007765 ORTHO05D009826 9.6e-18 94.4 203 34.5
BcaC04g22872 Brassica carinata HOM05D007765 ORTHO05D009826 1.3e-17 94.0 179 39.7
Dinv19560 Davidia involucrata HOM05D007765 ORTHO05D009826 1.6e-17 93.6 201 35.3
AL7G22010 Arabidopsis lyrata HOM05D007765 ORTHO05D009826 3.6e-17 92.4 169 39.1
FAN12G2617 Fragaria x ananassa HOM05D007765 ORTHO05D009826 3.6e-17 92.4 204 33.8
Sed0013776 Sechium edule HOM05D007765 ORTHO05D009826 3.6e-17 92.4 173 32.9
BcaNung04419 Brassica carinata HOM05D007765 ORTHO05D009826 1.1e-16 90.9 169 34.9
BcaB07g31628 Brassica carinata HOM05D007765 ORTHO05D009826 1.4e-16 90.5 176 36.4
Thhalv10026906m.g Eutrema salsugineum HOM05D007765 ORTHO05D009826 2.4e-16 89.7 168 37.5
Sp7g28050 Schrenkiella parvula HOM05D007765 ORTHO05D009826 2.4e-16 89.7 169 36.7
AT4G30180 Arabidopsis thaliana HOM05D007765 ORTHO05D009826 6.9e-16 88.2 170 35.9
CsaV3_2G008530 Cucumis sativus L. HOM05D007765 ORTHO05D009826 9.0e-16 87.8 182 33.5
A01p07960 Brassica napus HOM05D007765 ORTHO05D009826 2.0e-15 86.7 171 35.1
CARHR109510 Cardamine hirsuta HOM05D007765 ORTHO05D009826 2.0e-15 86.7 181 35.9
ClCG11G011990 Citrullus lanatus HOM05D007765 ORTHO05D009826 2.0e-15 86.7 195 33.3
BcaB03g12635 Brassica carinata HOM05D007765 ORTHO05D009826 2.6e-15 86.3 169 34.9
BraA01t00741Z Brassica rapa HOM05D007765 ORTHO05D009826 3.4e-15 85.9 171 34.5
BcaC09g51800 Brassica carinata HOM05D007765 ORTHO05D009826 4.9e-14 82.0 169 34.9
C01p08880 Brassica napus HOM05D007765 ORTHO05D009826 4.9e-14 82.0 169 34.9
BolC1t00878H Brassica oleracea HOM05D007765 ORTHO05D009826 4.9e-14 82.0 169 34.9
Prupe.1G081900 Prunus persica HOM05D007765 ORTHO05D009826 2.4e-13 79.7 200 32.0
PSO170G3972 Papaver somniferum HOM05D007765 ORTHO05D009826 5.4e-13 78.6 225 30.7
C03p88840 Brassica napus HOM05D007765 ORTHO05D009826 7.1e-13 78.2 175 33.7
BolC3t21196H Brassica oleracea HOM05D007765 ORTHO05D009826 7.1e-13 78.2 175 33.7
A08p19380 Brassica napus HOM05D007765 ORTHO05D009826 1.6e-12 77.0 175 33.1
BraA08t33899Z Brassica rapa HOM05D007765 ORTHO05D009826 1.6e-12 77.0 175 33.1
MBI16_g38085_MAGBIO Magnolia biondii HOM05D007765 ORTHO05D009826 2.1e-12 76.6 195 28.2
PSO063G6075 Papaver somniferum HOM05D007765 ORTHO05D009826 6.0e-12 75.1 225 30.2
THA.LOC104803486 Tarenaya hassleriana HOM05D007765 ORTHO05D009826 1.8e-11 73.6 184 34.8
Medtr2g083470 Medicago truncatula HOM05D007765 ORTHO05D009826 3.0e-11 72.8 66 57.6
CANSAT11G2643 Cannabis sativa HOM05D007765 ORTHO05D009826 1.5e-10 70.5 228 28.1
ATR0580G339 Amborella trichopoda HOM05D007765 ORTHO05D009826 7.6e-07 58.2 83 44.6
SEGI_40441 Sequoiadendron giganteum HOM05D007765 ORTHO05D009826 1.7e-06 57.0 223 24.2


User provided reference genes

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