Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 3.7e-189 664.8 363 100.0
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 3.6e-168 595.1 368 84.0
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 2.3e-167 592.4 366 83.1
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 3.9e-167 591.7 366 83.1
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 2.6e-163 578.9 371 79.5
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 1.1e-161 573.5 367 79.6
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 3.6e-160 568.5 363 80.2
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 1.2e-152 543.5 337 81.9
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 1.0e-151 540.4 322 83.5
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 3.0e-151 538.9 350 79.7
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 3.1e-148 528.9 365 74.8
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 1.1e-145 520.4 299 85.3
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 1.9e-145 519.6 333 78.1
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 2.5e-145 519.2 339 77.9
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 2.5e-145 519.2 340 78.2
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.2e-144 516.9 340 77.6
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 2.1e-144 516.2 329 78.7
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 6.1e-144 514.6 340 77.6
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 8.0e-144 514.2 320 80.0
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 1.8e-143 513.1 319 79.9
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 2.3e-143 512.7 340 77.6
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 6.8e-143 511.1 298 82.9
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 1.2e-142 510.4 328 76.8
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 1.5e-142 510.0 334 74.6
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 2.6e-142 509.2 338 75.4
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 7.5e-142 507.7 318 78.9
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 9.8e-142 507.3 298 82.2
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 9.8e-142 507.3 339 76.4
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 1.7e-141 506.5 287 85.4
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 2.8e-141 505.8 353 73.7
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 4.9e-141 505.0 336 75.3
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 8.3e-141 504.2 307 80.1
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 5.4e-140 501.5 315 80.0
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 5.4e-140 501.5 287 85.0
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 5.4e-140 501.5 287 85.0
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 3.5e-139 498.8 333 75.4
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 4.5e-139 498.4 287 84.3
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 4.5e-139 498.4 287 84.3
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 4.5e-139 498.4 287 84.3
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 1.0e-138 497.3 328 75.9
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 1.3e-138 496.9 357 72.5
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 1.7e-138 496.5 296 82.4
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 6.6e-138 494.6 324 76.9
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 3.3e-137 492.3 304 79.9
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 5.6e-137 491.5 330 74.5
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 1.6e-136 490.0 325 74.2
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 1.6e-136 490.0 326 74.5
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 2.8e-136 489.2 285 82.5
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 4.7e-136 488.4 325 73.2
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 4.7e-136 488.4 312 76.9
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 2.3e-135 486.1 327 73.7
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 2.3e-135 486.1 325 73.2
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.3e-135 486.1 331 74.3
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 3.0e-135 485.7 331 74.3
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 4.0e-135 485.3 331 74.6
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 4.0e-135 485.3 331 74.6
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 5.2e-135 485.0 324 72.8
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 8.9e-135 484.2 286 79.4
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 2.6e-134 482.6 304 76.6
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 2.6e-134 482.6 326 73.3
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 4.4e-134 481.9 322 73.3
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 5.8e-134 481.5 322 73.0
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 5.8e-134 481.5 287 79.4
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 7.5e-134 481.1 322 73.0
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 7.5e-134 481.1 304 78.3
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 9.8e-134 480.7 332 73.5
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 1.3e-133 480.3 324 73.5
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 1.3e-133 480.3 322 73.9
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.7e-133 479.9 332 73.5
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 1.7e-133 479.9 304 77.0
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 2.2e-133 479.6 345 69.9
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 4.9e-133 478.4 304 77.6
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 1.8e-132 476.5 304 76.6
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 4.1e-132 475.3 332 73.8
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 4.1e-132 475.3 304 77.3
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 5.4e-132 474.9 329 72.3
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 5.4e-132 474.9 325 71.1
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 7.0e-132 474.6 304 75.3
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 5.0e-130 468.4 261 84.3
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 5.6e-129 464.9 287 74.9
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 7.3e-129 464.5 261 82.4
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 9.5e-129 464.2 345 66.4
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 2.1e-128 463.0 327 69.4
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 8.0e-128 461.1 307 73.9
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 1.4e-127 460.3 351 66.7
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 1.4e-127 460.3 287 76.0
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 2.3e-127 459.5 305 73.4
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 2.0e-126 456.4 287 73.9
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 2.2e-125 453.0 308 70.8
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 4.9e-125 451.8 289 77.9
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 1.4e-124 450.3 279 78.5
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 3.9e-122 442.2 261 79.3
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 6.2e-120 434.9 317 64.7
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 1.4e-119 433.7 287 71.8
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 4.0e-119 432.2 336 69.3
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 8.9e-119 431.0 304 71.1
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 2.0e-118 429.9 334 65.9
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 1.7e-117 426.8 298 71.8
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 1.7e-114 416.8 344 62.5
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 2.3e-114 416.4 311 71.4
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 3.3e-113 412.5 317 65.9
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 4.3e-113 412.1 329 62.3
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 9.5e-113 411.0 335 64.5
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 1.6e-112 410.2 242 79.3
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 2.6e-110 402.9 425 53.2
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 4.4e-110 402.1 328 61.3
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.1e-103 380.9 238 75.2
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 9.0e-103 377.9 289 67.8
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 1.9e-100 370.2 303 61.4
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 6.4e-93 345.1 235 66.4
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 1.1e-87 327.8 259 64.1
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 4.0e-79 299.3 206 66.5
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 5.1e-74 282.3 281 56.6
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 7.4e-73 278.5 200 69.0
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.8e-72 276.6 209 70.8
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 1.4e-68 264.2 283 45.6
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 3.0e-66 256.5 282 46.5
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 6.3e-56 222.2 334 36.5
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 6.7e-42 175.6 122 63.9
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 1.5e-41 174.5 96 87.5
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 3.6e-35 153.3 120 57.5
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.8e-34 151.0 95 77.9
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 1.2e-33 148.3 192 36.5
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 1.1e-28 131.7 80 82.5
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 8.3e-24 115.5 62 85.5
SEGI_25179 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 6.0e-14 82.8 65 60.0
Ah.13g069250 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.6e-11 74.7 89 51.7
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 1.9e-07 61.2 42 66.7
Aqoxy1G04253 Aquilegia oxysepala HOM05D006127 ORTHO05D078839 1.2e-06 58.5 49 63.3


User provided reference genes

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