Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9164 Trifolium pratense HOM05D000002 ORTHO05D012330 1.4e-52 209.1 95 100.0
Psat2g157200 Pisum sativum HOM05D000002 ORTHO05D000047 3.0e-26 121.7 68 80.9
Psat2g125560 Pisum sativum HOM05D000002 ORTHO05D000047 4.0e-26 121.3 68 80.9
Psat5g245120 Pisum sativum HOM05D000002 ORTHO05D000047 1.5e-25 119.4 68 79.4
Psat5g071600 Pisum sativum HOM05D000002 ORTHO05D012330 2.2e-24 115.5 68 77.9
Lj2g0000572 Lotus japonicus HOM05D000002 ORTHO05D000047 6.5e-21 104.0 82 58.5
Psat3g110120 Pisum sativum HOM05D000002 ORTHO05D000047 8.5e-21 103.6 57 80.7
Lj1g0015515 Lotus japonicus HOM05D000002 ORTHO05D012330 1.3e-13 79.7 69 49.3
Psat7g240720 Pisum sativum HOM05D000075 ORTHO05D000047 6.5e-13 77.4 75 50.7
Psat0s974g0040 Pisum sativum HOM05D000002 ORTHO05D000047 8.6e-13 77.0 75 50.7
Psat7g228680 Pisum sativum HOM05D000002 ORTHO05D012330 2.5e-12 75.5 75 48.0
Hma1.2p1_0042F.1_g025670 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.2e-12 73.9 70 45.7
Psat6g149400 Pisum sativum HOM05D000002 ORTHO05D000047 1.2e-11 73.2 70 51.4
Hma1.2p1_1551F.1_g290130 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-11 72.0 67 52.2
Lj2g0018983 Lotus japonicus HOM05D000002 ORTHO05D012330 1.0e-10 70.1 66 50.0
Psat6g094800 Pisum sativum HOM05D000002 ORTHO05D000047 1.4e-10 69.7 62 51.6
Psat0ss2374g0080 Pisum sativum HOM05D000002 ORTHO05D000047 1.8e-10 69.3 62 51.6
CANSAT25G2485 Cannabis sativa HOM05D000002 ORTHO05D000047 2.3e-10 68.9 74 43.2
Psat3g034800 Pisum sativum HOM05D000002 ORTHO05D000047 2.3e-10 68.9 65 49.2
Psat4g075880 Pisum sativum HOM05D000002 ORTHO05D000047 2.3e-10 68.9 62 51.6
Psat6g204680 Pisum sativum HOM05D000002 ORTHO05D000047 3.0e-10 68.6 75 46.7
Psat7g018840 Pisum sativum HOM05D000002 ORTHO05D000047 4.0e-10 68.2 62 50.0
Psat0s283g0200 Pisum sativum HOM05D000002 ORTHO05D000047 5.2e-10 67.8 64 48.4
Psat3g120320 Pisum sativum HOM05D013923 ORTHO05D000047 5.2e-10 67.8 59 50.8
Psat4g075920 Pisum sativum HOM05D000002 ORTHO05D012330 5.2e-10 67.8 83 39.8
Hma1.2p1_0471F.1_g159500 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.8e-10 67.4 66 43.9
Psat1g039640 Pisum sativum HOM05D000002 ORTHO05D000047 6.8e-10 67.4 62 48.4
Psat0s6300g0040 Pisum sativum HOM05D000002 ORTHO05D000047 8.8e-10 67.0 70 50.0
Hma1.2p1_3146F.1_g333140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-09 66.6 65 44.6
PSO541G0327 Papaver somniferum HOM05D000002 ORTHO05D000001 1.5e-09 66.2 67 46.3
Psat4g202720 Pisum sativum HOM05D000002 ORTHO05D000047 1.5e-09 66.2 70 50.0
PSO210G7350 Papaver somniferum HOM05D000002 ORTHO05D012330 2.0e-09 65.9 62 46.8
Psat0s4127g0080 Pisum sativum HOM05D000002 ORTHO05D000047 2.0e-09 65.9 68 41.2
PSO017G3933 Papaver somniferum HOM05D000002 ORTHO05D000047 3.4e-09 65.1 62 46.8
Potri.013G092801 Populus trichocarpa HOM05D000002 ORTHO05D000047 3.4e-09 65.1 72 44.4
THA.LOC104798893 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 3.4e-09 65.1 75 45.3
Hma1.2p1_1369F.1_g278610 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.5e-09 63.9 63 46.0
PSO675G0323 Papaver somniferum HOM05D000002 ORTHO05D000001 7.5e-09 63.9 59 45.8
Hma1.2p1_0896F.1_g233970 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.8e-09 63.5 52 48.1
PSO017G3514 Papaver somniferum HOM05D000002 ORTHO05D000001 9.8e-09 63.5 60 48.3
Psat7g231680 Pisum sativum HOM05D000002 ORTHO05D000047 9.8e-09 63.5 65 46.2
Cpa.g.sc227.9 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-08 63.2 61 45.9
PSO063G3500 Papaver somniferum HOM05D000002 ORTHO05D000001 1.3e-08 63.2 66 43.9
PSO832G3260 Papaver somniferum HOM05D000002 ORTHO05D000047 1.3e-08 63.2 62 45.2
Hma1.2p1_0168F.1_g074070 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-08 62.4 69 39.1
Hma1.2p1_0233F.1_g098070 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-08 62.4 64 43.8
PSO063G2113 Papaver somniferum HOM05D000002 ORTHO05D012330 2.8e-08 62.0 46 56.5
PSO541G0667 Papaver somniferum HOM05D000002 ORTHO05D000047 2.8e-08 62.0 62 45.2
Sp4g07420 Schrenkiella parvula HOM05D000002 ORTHO05D000047 2.8e-08 62.0 48 56.2
Psat7g121120 Pisum sativum HOM05D000002 ORTHO05D000047 3.7e-08 61.6 47 55.3
Psat0s1953g0440 Pisum sativum HOM05D000002 ORTHO05D000047 8.3e-08 60.5 62 46.8
SpUn0001_0830 Schrenkiella parvula HOM05D000002 ORTHO05D012330 8.3e-08 60.5 43 51.2
PSO541G4010 Papaver somniferum HOM05D000002 ORTHO05D000001 1.4e-07 59.7 67 41.8
Manes.17G044450 Manihot esculenta HOM05D000002 ORTHO05D000047 2.4e-07 58.9 71 40.8
PSO675G4473 Papaver somniferum HOM05D000002 ORTHO05D000001 2.4e-07 58.9 68 44.1
THA.LOC104823078 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.4e-07 58.9 78 39.7
PSO017G5695 Papaver somniferum HOM05D000002 ORTHO05D012330 3.1e-07 58.5 59 42.4
Sp5g25877 Schrenkiella parvula HOM05D000002 ORTHO05D000047 3.1e-07 58.5 49 49.0
THA.LOC104822774 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 3.1e-07 58.5 46 47.8
PSO063G1211 Papaver somniferum HOM05D000002 ORTHO05D000047 4.1e-07 58.2 59 40.7
PSO384G4266 Papaver somniferum HOM05D000002 ORTHO05D012330 4.1e-07 58.2 59 40.7
PSO423G0187 Papaver somniferum HOM05D000002 ORTHO05D000047 4.1e-07 58.2 67 40.3
PSO648G0082 Papaver somniferum HOM05D000002 ORTHO05D012330 5.4e-07 57.8 59 40.7
BolC8t49586H Brassica oleracea HOM05D000002 ORTHO05D000047 7.0e-07 57.4 40 62.5
PSO017G4782 Papaver somniferum HOM05D000002 ORTHO05D012330 9.2e-07 57.0 67 41.8
THA.LOC104804236 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 1.2e-06 56.6 53 43.4
AUR62006806 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.7e-06 55.5 59 49.2
Manes.04G059192 Manihot esculenta HOM05D000002 ORTHO05D000047 2.7e-06 55.5 55 45.5
Manes.06G098650 Manihot esculenta HOM05D000002 ORTHO05D000047 2.7e-06 55.5 49 46.9
Psat1g023480 Pisum sativum HOM05D013923 ORTHO05D000047 2.7e-06 55.5 61 45.9
Ah.07g203190 Amaranthus hybridus HOM05D000002 ORTHO05D000047 3.5e-06 55.1 51 49.0
Sp2g09183 Schrenkiella parvula HOM05D000002 ORTHO05D012330 4.5e-06 54.7 48 47.9
Sp7g07320 Schrenkiella parvula HOM05D000002 ORTHO05D000047 4.5e-06 54.7 54 50.0
HanXRQChr15g0494581 Helianthus annuus HOM05D000002 ORTHO05D000047 5.9e-06 54.3 34 58.8
SEGI_01318 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.9e-06 54.3 40 47.5
SEGI_08695 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.9e-06 54.3 40 47.5
SEGI_08785 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.9e-06 54.3 40 47.5
SEGI_27781 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.9e-06 54.3 40 47.5
SEGI_38276 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.9e-06 54.3 40 47.5
ECA236G3953 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-06 53.9 46 47.8
ECA240G1683 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-06 53.9 46 47.8
HanXRQChr12g0365581 Helianthus annuus HOM05D000002 ORTHO05D000047 7.8e-06 53.9 36 50.0
THA.LOC104819828 Tarenaya hassleriana HOM05D000002 ORTHO05D012330 7.8e-06 53.9 53 41.5


User provided reference genes

Program Settings