Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 1.4e-51 206.1 106 100.0
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 1.2e-47 193.0 103 95.1
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 3.1e-40 168.3 103 83.5
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 7.0e-40 167.2 103 83.5
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 3.5e-39 164.9 103 81.6
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 3.5e-39 164.9 103 79.6
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 8.6e-38 160.2 103 80.6
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 2.3e-35 152.1 103 74.8
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 8.9e-35 150.2 107 72.0
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 5.7e-34 147.5 105 73.3
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 4.1e-32 141.4 107 68.2
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 5.4e-32 141.0 103 68.9
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 7.0e-32 140.6 106 70.8
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 9.2e-32 140.2 106 67.9
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 2.0e-31 139.0 98 71.4
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 5.9e-31 137.5 103 68.0
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 1.0e-30 136.7 106 68.9
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 1.3e-30 136.3 106 67.9
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 1.3e-30 136.3 103 66.0
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 2.3e-30 135.6 103 68.0
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 3.0e-30 135.2 103 67.0
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 3.9e-30 134.8 105 64.8
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 3.9e-30 134.8 106 67.9
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 3.9e-30 134.8 103 65.0
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 3.9e-30 134.8 107 65.4
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 8.6e-30 133.7 105 62.9
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 8.6e-30 133.7 106 67.9
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 1.1e-29 133.3 102 64.7
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 2.5e-29 132.1 105 64.8
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 2.5e-29 132.1 105 62.9
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 3.3e-29 131.7 105 63.8
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 3.3e-29 131.7 104 64.4
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 3.3e-29 131.7 104 61.5
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 4.3e-29 131.3 103 64.1
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 4.3e-29 131.3 104 59.6
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 5.6e-29 131.0 105 62.9
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 5.6e-29 131.0 109 62.4
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 7.3e-29 130.6 105 62.9
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 7.3e-29 130.6 103 64.1
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 1.2e-28 129.8 107 63.6
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 1.2e-28 129.8 107 63.6
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 1.2e-28 129.8 102 62.7
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 1.6e-28 129.4 107 63.6
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 1.6e-28 129.4 108 63.0
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 1.6e-28 129.4 104 66.3
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 1.6e-28 129.4 104 66.3
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 2.1e-28 129.0 103 63.1
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 3.6e-28 128.3 105 61.9
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 4.7e-28 127.9 103 60.2
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 6.2e-28 127.5 107 62.6
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 6.2e-28 127.5 107 62.6
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 8.0e-28 127.1 112 61.6
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 1.0e-27 126.7 105 61.0
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 1.0e-27 126.7 106 61.3
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 2.3e-27 125.6 104 61.5
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 4.0e-27 124.8 102 64.7
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 4.0e-27 124.8 103 60.2
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 5.2e-27 124.4 103 59.2
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 6.8e-27 124.0 103 61.2
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 2.6e-26 122.1 103 60.2
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 4.4e-26 121.3 103 61.2
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 5.8e-26 120.9 103 60.2
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 5.8e-26 120.9 106 55.7
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 9.8e-26 120.2 103 62.1
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 2.9e-25 118.6 108 56.5
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 8.3e-25 117.1 104 58.7
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 1.1e-24 116.7 104 62.5
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 1.1e-24 116.7 103 58.3
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 1.1e-24 116.7 108 55.6
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 1.4e-24 116.3 103 59.2
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 1.4e-24 116.3 98 58.2
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 1.9e-24 115.9 105 57.1
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 2.4e-24 115.5 103 55.3
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 9.2e-24 113.6 106 56.6
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 1.2e-23 113.2 105 54.3
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 1.6e-23 112.8 104 58.7
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 1.6e-23 112.8 103 57.3
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 1.6e-23 112.8 102 56.9
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 2.0e-23 112.5 103 56.3
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 2.7e-23 112.1 110 56.4
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 1.0e-22 110.2 105 57.1
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 1.3e-22 109.8 99 59.6
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 8.6e-22 107.1 102 53.9
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 3.3e-21 105.1 98 53.1
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 1.2e-20 103.2 117 48.7
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 1.7e-17 92.8 151 39.1
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 4.6e-15 84.7 61 70.5
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 7.8e-15 84.0 60 70.0
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 2.3e-14 82.4 59 71.2
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 8.6e-14 80.5 98 46.9
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 7.3e-13 77.4 58 72.4
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 1.2e-12 76.6 56 69.6
Ca_22684_v3 Cicer arietinum L. HOM05D007485 ORTHO05D009437 3.4e-10 68.6 53 73.6
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 4.9e-09 64.7 59 55.9
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 9.2e-08 60.5 60 51.7


User provided reference genes

Program Settings