Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9125 Trifolium pratense HOM05D005096 ORTHO05D006566 0.0e+00 1651.3 871 100.0
Medtr1g072270 Medicago truncatula HOM05D005096 ORTHO05D006566 0.0e+00 1481.1 867 90.3
Ca_09758_v3 Cicer arietinum L. HOM05D005096 ORTHO05D006566 0.0e+00 1451.0 864 87.8
Lj5g0021757 Lotus japonicus HOM05D005096 ORTHO05D006566 0.0e+00 1361.3 866 81.6
Psat6g060000 Pisum sativum HOM05D005096 ORTHO05D006566 0.0e+00 1333.2 770 90.4
Glyma.02G147400 Glycine max HOM05D005096 ORTHO05D006566 0.0e+00 1326.6 861 81.1
Glyma.10G026400 Glycine max HOM05D005096 ORTHO05D006566 0.0e+00 1313.5 861 80.7
Phvul.007G172000 Phaseolus vulgaris HOM05D005096 ORTHO05D006566 0.0e+00 1286.9 861 78.9
VMungo0720G0024 Vigna mungo HOM05D005096 ORTHO05D006566 0.0e+00 1281.9 861 78.4
arahy.Tifrunner.gnm1.ann1.2R7T4K Arachis hypogaea HOM05D005096 ORTHO05D006566 0.0e+00 1231.1 872 75.2
arahy.Tifrunner.gnm1.ann1.TN9YNV Arachis hypogaea HOM05D005096 ORTHO05D006566 0.0e+00 1194.9 937 69.8
Prupe.8G241300 Prunus persica HOM05D005096 ORTHO05D006566 1.4e-308 1062.8 862 66.1
Cfa006136 Carpinus fangiana HOM05D005096 ORTHO05D006566 2.5e-308 1062.0 869 65.4
GSVIVG01011085001 Vitis vinifera HOM05D005096 ORTHO05D006566 6.7e-306 1053.9 865 64.6
FAN27G2515 Fragaria x ananassa HOM05D005096 ORTHO05D006566 3.3e-305 1051.6 860 63.8
QL12p021914 Quercus lobata HOM05D005096 ORTHO05D006566 3.3e-305 1051.6 862 65.5
FAN15G1882 Fragaria x ananassa HOM05D005096 ORTHO05D006566 5.7e-305 1050.8 860 64.0
FAN20G2556 Fragaria x ananassa HOM05D005096 ORTHO05D006566 2.2e-304 1048.9 860 63.8
FvH4_2g23600 Fragaria vesca HOM05D005096 ORTHO05D006566 8.2e-304 1047.0 860 63.5
Haze_04712 Corylus avellana HOM05D005096 ORTHO05D006566 3.1e-303 1045.0 908 63.1
Dinv32937 Davidia involucrata HOM05D005096 ORTHO05D006566 1.0e-301 1040.0 867 64.1
Atru.chr5.1434 Acer truncatum HOM05D005096 ORTHO05D006566 3.2e-300 1035.0 867 63.6
CiPaw.07G091400 Carya illinoinensis HOM05D005096 ORTHO05D006566 4.2e-300 1034.6 865 64.7
Duzib138G0773 Durio zibethinus HOM05D005096 ORTHO05D006566 2.1e-299 1032.3 867 64.0
RcHm_v2.0_Chr6g0291071 Rosa chinensis HOM05D005096 ORTHO05D006566 1.0e-298 1030.0 867 63.3
CSS0045500 Camellia sinensis var. sinensis HOM05D005096 ORTHO05D006566 1.4e-298 1029.6 864 63.0
Sabra05G0159300 Salix brachista HOM05D005096 ORTHO05D006566 8.8e-298 1026.9 866 63.5
Thecc.01G279600 Theobroma cacao HOM05D005096 ORTHO05D006566 3.3e-297 1025.0 871 63.1
MD11G1286100 Malus domestica HOM05D005096 ORTHO05D006566 5.7e-297 1024.2 862 63.8
COL.COLO4_09099 Corchorus olitorius HOM05D005096 ORTHO05D006566 2.2e-296 1022.3 865 62.7
Potri.005G209200 Populus trichocarpa HOM05D005096 ORTHO05D006566 9.1e-295 1016.9 872 63.1
TAR633G0362 Trochodendron aralioides HOM05D005096 ORTHO05D006566 2.7e-294 1015.4 864 63.8
Lj2A1173G9 Lonicera japonica HOM05D005096 ORTHO05D006566 5.9e-294 1014.2 865 62.4
Manes.05G076137 Manihot esculenta HOM05D005096 ORTHO05D006566 1.9e-292 1009.2 867 62.9
Ciclev10023868m.g Citrus clementina HOM05D005096 ORTHO05D006566 2.1e-291 1005.7 841 64.3
CsaV3_6G037120 Cucumis sativus L. HOM05D005096 ORTHO05D006566 2.3e-290 1002.3 863 63.2
Actinidia09139 Actinidia chinensis HOM05D005096 ORTHO05D006566 3.0e-290 1001.9 865 61.0
Actinidia00750 Actinidia chinensis HOM05D005096 ORTHO05D006566 4.8e-288 994.6 864 60.4
Gorai.004G080200 Gossypium raimondii HOM05D005096 ORTHO05D006566 4.8e-288 994.6 868 60.8
TWI23G0916 Tripterygium wilfordii HOM05D005096 ORTHO05D006566 4.8e-288 994.6 867 63.1
ClCG07G000240 Citrullus lanatus HOM05D005096 ORTHO05D006566 3.1e-287 991.9 865 62.9
Oeu022870.1 Olea europaea HOM05D005096 ORTHO05D006566 5.4e-287 991.1 866 59.9
FAN24G2260 Fragaria x ananassa HOM05D005096 ORTHO05D006566 6.6e-285 984.2 860 60.7
Duzib133G0542 Durio zibethinus HOM05D005096 ORTHO05D006566 2.5e-284 982.2 863 61.6
Rhsim13G0024600 Rhododendron simsii HOM05D005096 ORTHO05D006566 3.3e-284 981.9 865 60.2
vmacro02569 Vaccinium macrocarpon HOM05D005096 ORTHO05D006566 1.2e-283 979.9 866 60.2
CANSAT25G0791 Cannabis sativa HOM05D005096 ORTHO05D006566 5.2e-282 974.5 868 61.1
Aqoxy2G03326 Aquilegia oxysepala HOM05D005096 ORTHO05D006566 3.5e-278 961.8 869 59.0
Sed0025205 Sechium edule HOM05D005096 ORTHO05D006566 5.9e-278 961.1 866 60.5
Gohir.D08G075900 Gossypium hirsutum HOM05D005096 ORTHO05D006566 1.2e-275 953.4 868 59.0
THA.LOC104801235 Tarenaya hassleriana HOM05D005096 ORTHO05D006566 1.0e-274 950.3 869 57.9
Migut.D00294 Erythranthe guttata HOM05D005096 ORTHO05D006566 8.9e-274 947.2 868 57.8
Sp1g02185 Schrenkiella parvula HOM05D005096 ORTHO05D006566 1.7e-272 943.0 864 57.4
Carub.0001s0230 Capsella rubella HOM05D005096 ORTHO05D006566 2.9e-272 942.2 867 57.8
SalBow4G0282 Salvia bowleyana HOM05D005096 ORTHO05D006566 2.9e-272 942.2 864 58.2
Nitab4.5_0000458g0050 Nicotiana tabacum HOM05D005096 ORTHO05D006566 3.2e-271 938.7 862 58.6
AL1G12650 Arabidopsis lyrata HOM05D005096 ORTHO05D006566 4.1e-271 938.3 867 57.2
DCAR_002736 Daucus carota HOM05D005096 ORTHO05D006566 4.6e-270 934.9 868 58.6
Nitab4.5_0008435g0030 Nicotiana tabacum HOM05D005096 ORTHO05D006566 1.0e-269 933.7 862 57.9
C08p00440 Brassica napus HOM05D005096 ORTHO05D006566 1.3e-269 933.3 864 58.6
Peaxi162Scf01607g00116 Petunia axillaris HOM05D005096 ORTHO05D006566 3.9e-269 931.8 876 58.2
BolC8t46843H Brassica oleracea HOM05D005096 ORTHO05D006566 1.1e-268 930.2 864 58.3
CARHR002500 Cardamine hirsuta HOM05D005096 ORTHO05D006566 1.2e-267 926.8 866 56.7
A08p37450 Brassica napus HOM05D005096 ORTHO05D006566 8.0e-267 924.1 864 57.6
BraA08t35643Z Brassica rapa HOM05D005096 ORTHO05D006566 8.0e-267 924.1 864 57.6
Thhalv10006729m.g Eutrema salsugineum HOM05D005096 ORTHO05D006566 1.1e-266 923.7 863 56.5
Sc05g0004960 Simmondsia chinensis HOM05D005096 ORTHO05D006566 1.5e-265 919.8 865 57.7
Lsat_1_v5_gn_9_3760 Lactuca sativa HOM05D005096 ORTHO05D006566 3.4e-265 918.7 865 56.8
HanXRQChr10g0282661 Helianthus annuus HOM05D005096 ORTHO05D006566 4.4e-265 918.3 863 55.4
Sopen09g026860 Solanum pennellii HOM05D005096 ORTHO05D006566 6.4e-264 914.4 869 57.8
MSTRG.21562 Avicennia marina HOM05D005096 ORTHO05D006566 1.4e-263 913.3 867 56.7
Hund05342 Selenicereus undatus HOM05D005096 ORTHO05D006566 1.4e-263 913.3 871 56.3
ECA247G0546 Erigeron canadensis HOM05D005096 ORTHO05D006566 4.6e-262 908.3 869 55.4
PSO170G0567 Papaver somniferum HOM05D005096 ORTHO05D006566 2.5e-260 902.5 875 56.7
EL10Ac7g17230 Beta vulgaris HOM05D005096 ORTHO05D006566 1.6e-259 899.8 875 55.7
Ah.15g091940 Amaranthus hybridus HOM05D005096 ORTHO05D006566 2.8e-259 899.0 865 55.8
Aa31LG1G9370 Aethionema arabicum HOM05D005096 ORTHO05D006566 4.0e-258 895.2 873 54.6
PSO302G0140 Papaver somniferum HOM05D005096 ORTHO05D006566 4.9e-256 888.3 872 56.4
Cc01_g19500 Coffea canephora HOM05D005096 ORTHO05D006566 4.1e-255 885.2 875 55.5
MBI19_g21295_MAGBIO Magnolia biondii HOM05D005096 ORTHO05D006566 4.0e-250 868.6 775 61.3
CAN.G242.2 Capsicum annuum HOM05D005096 ORTHO05D006566 1.5e-249 866.7 860 55.3
unitig_0.g1141 Utricularia gibba HOM05D005096 ORTHO05D003974 3.2e-247 859.0 866 53.7
Eucgr.H01482 Eucalyptus grandis HOM05D005096 ORTHO05D006566 9.3e-247 857.4 753 60.3
PGR119G0033 Punica granatum HOM05D005096 ORTHO05D006566 6.6e-245 851.3 736 62.9
Gohir.A08G067500 Gossypium hirsutum HOM05D005096 ORTHO05D006566 8.7e-245 850.9 736 61.5
ATR0626G051 Amborella trichopoda HOM05D005096 ORTHO05D006566 1.1e-244 850.5 861 52.8
AUR62036827 Chenopodium quinoa HOM05D005096 ORTHO05D006566 5.3e-242 841.6 881 52.7
Lalb_Chr02g0142781 Lupinus albus HOM05D005096 ORTHO05D006566 8.4e-240 834.3 550 77.8
HPP92_012091 Vanilla planifolia HOM05D003650 ORTHO05D004213 3.2e-239 832.4 864 52.5
CDE06G0317 Ceratophyllum demersum HOM05D005096 ORTHO05D006566 6.6e-237 824.7 861 52.3
SGA_v2.0_scaffold1G00471 Striga asiatica HOM05D005096 ORTHO05D006566 2.3e-229 799.7 867 52.7
AUR62043137 Chenopodium quinoa HOM05D005096 ORTHO05D006566 6.7e-229 798.1 869 51.4
Hma1.2p1_0257F.1_g103450 Hydrangea macrophylla HOM05D005096 ORTHO05D006566 4.8e-219 765.4 660 62.7
Os05g0390100 Oryza sativa ssp. japonica HOM05D005096 ORTHO05D006566 2.9e-216 756.1 803 50.9
Solyc09g065160.4 Solanum lycopersicum HOM05D005096 ORTHO05D006566 6.5e-216 755.0 732 56.3
AT1G03160 Arabidopsis thaliana HOM05D005096 ORTHO05D006566 2.6e-201 706.4 645 59.7
Duzib133G0424 Durio zibethinus HOM05D005096 ORTHO05D006566 2.1e-198 696.8 550 64.9
Zm00001eb287190 Zea mays HOM05D005096 ORTHO05D006566 7.7e-185 651.7 611 54.3
Mapoly0002s0267 Marchantia polymorpha HOM05D005096 ORTHO05D006566 9.4e-175 618.2 893 41.0
Pp3c10_17390 Physcomitrium patens HOM05D005096 ORTHO05D006566 8.3e-171 605.1 886 39.5
AagrBONN_evm.TU.Sc2ySwM_228.961 Anthoceros agrestis HOM05D005096 ORTHO05D006566 5.6e-167 592.4 879 41.4
Pp3c3_25850 Physcomitrium patens HOM05D005096 ORTHO05D006566 2.8e-166 590.1 892 39.3
MD11G1312200 Malus domestica HOM05D005096 ORTHO05D006566 4.0e-165 586.3 714 50.3
MELO3C014401.2 Cucumis melo HOM05D005096 ORTHO05D006566 1.2e-164 584.7 477 64.2
Sabra02G0043400 Salix brachista HOM05D005096 ORTHO05D006566 4.9e-155 552.7 806 45.5
SMO147G0152 Selaginella moellendorffii HOM05D005096 ORTHO05D006566 3.6e-142 510.0 866 37.0
MD11G1311700 Malus domestica HOM05D005096 ORTHO05D006566 3.5e-129 466.8 482 56.6
PRCOL_00001755 Prasinoderma coloniale HOM05D005096 ORTHO05D006566 2.1e-113 414.5 915 31.7
Lalb_Chr02g0142771 Lupinus albus HOM05D005096 ORTHO05D006566 6.2e-110 402.9 314 70.1
CBR_g4009 Chara braunii HOM05D005096 ORTHO05D006566 3.9e-104 383.6 954 32.8
MELO3C014400.2 Cucumis melo HOM05D005096 ORTHO05D008790 1.9e-103 381.3 366 59.8
Hund05386 Selenicereus undatus HOM05D005096 ORTHO05D006566 5.9e-100 369.8 384 55.5
AUR62043139 Chenopodium quinoa HOM05D005096 ORTHO05D006566 2.8e-94 350.9 348 52.3
Cpa.g.sc52.38 Carica papaya HOM05D005096 ORTHO05D006566 5.9e-92 343.2 323 56.0
Cre14.g616600 Chlamydomonas reinhardtii HOM05D005096 ORTHO05D006566 1.9e-90 338.2 981 28.2
Cpa.g.c40412 Carica papaya HOM05D005096 ORTHO05D006566 9.4e-90 335.9 303 57.8
AUR62043138 Chenopodium quinoa HOM05D005096 ORTHO05D006566 2.8e-86 324.3 431 47.6
MCO02G198 Micromonas commoda HOM05D005096 ORTHO05D006566 9.1e-85 319.3 951 28.7
Cpa.g.c38803 Carica papaya HOM05D005096 ORTHO05D006566 8.8e-72 276.2 269 57.2
Migut.D00341 Erythranthe guttata HOM05D005096 ORTHO05D006566 8.2e-70 269.6 478 40.8
Potri.002G053332 Populus trichocarpa HOM05D005096 ORTHO05D006566 1.7e-67 261.9 256 56.2
Hund05340 Selenicereus undatus HOM05D005096 ORTHO05D006566 2.3e-64 251.5 181 69.1
MD11G1311600 Malus domestica HOM05D005096 ORTHO05D006566 8.0e-57 226.5 214 56.1
MD11G1311400 Malus domestica HOM05D005096 ORTHO05D006566 2.6e-55 221.5 399 41.4
Sabra05G0150000 Salix brachista HOM05D005096 ORTHO05D006566 1.4e-48 199.1 155 64.5
Potri.002G053366 Populus trichocarpa HOM05D005096 ORTHO05D006566 2.0e-47 195.3 194 53.6
arahy.Tifrunner.gnm1.ann1.VTSW9N Arachis hypogaea HOM05D005096 ORTHO05D006566 4.1e-45 187.6 132 73.5
SEGI_13636 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.3e-43 182.6 266 39.5
Cpa.g.c44243 Carica papaya HOM05D005096 ORTHO05D006566 4.0e-40 171.0 132 64.4
SEGI_14404 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 4.0e-40 171.0 330 39.1
SEGI_20481 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.2e-36 159.5 177 46.3
Glyma.18G167550 Glycine max HOM05D005096 ORTHO05D006566 4.3e-34 151.0 96 81.2
Cpa.g.sc370.1 Carica papaya HOM05D005096 ORTHO05D006566 4.1e-29 134.4 105 69.5
TAR362G0796 Trochodendron aralioides HOM05D005096 ORTHO05D006566 2.8e-25 121.7 96 65.6
PGSC0003DMG400012881 Solanum tuberosum HOM05D005096 ORTHO05D006566 3.6e-25 121.3 102 61.8
MD00G1063200 Malus domestica HOM05D005096 ORTHO05D006566 2.3e-24 118.6 124 52.4
arahy.Tifrunner.gnm1.ann1.X3UYKF Arachis hypogaea HOM05D005525 ORTHO05D006341 2.5e-18 98.6 153 47.7
arahy.Tifrunner.gnm1.ann1.BB9JSJ Arachis hypogaea HOM05D000384 ORTHO05D000468 7.3e-18 97.1 91 60.4
arahy.Tifrunner.gnm1.ann1.K3B567 Arachis hypogaea HOM05D005525 ORTHO05D006341 3.6e-17 94.7 146 45.9
arahy.Tifrunner.gnm1.ann1.Y3S9ZW Arachis hypogaea HOM05D005525 ORTHO05D006341 2.0e-15 89.0 366 28.7
arahy.Tifrunner.gnm1.ann1.8W9TWR Arachis hypogaea HOM05D005096 ORTHO05D006566 3.8e-14 84.7 60 70.0
SEGI_24308 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 4.2e-13 81.3 48 79.2
SEGI_37612 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 3.5e-12 78.2 178 27.5
MD11G1311300 Malus domestica HOM05D005096 ORTHO05D006566 1.3e-11 76.3 68 64.7
Hund05341 Selenicereus undatus HOM05D005096 ORTHO05D006566 1.1e-10 73.2 78 50.0
SEGI_40401 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 2.4e-08 65.5 113 37.2
Hma1.2p1_0536F.1_g174110 Hydrangea macrophylla HOM05D005096 ORTHO05D006214 4.0e-08 64.7 63 52.4


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