Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9088 Trifolium pratense HOM05D007271 ORTHO05D009217 3.2e-106 388.7 224 100.0
Medtr5g027460 Medicago truncatula HOM05D007271 ORTHO05D009217 8.7e-96 354.0 224 86.6
Psat2g139720 Pisum sativum HOM05D007271 ORTHO05D009217 2.6e-92 342.4 182 93.4
Ca_25147_v3 Cicer arietinum L. HOM05D007271 ORTHO05D009217 7.6e-92 340.9 224 80.4
VMungo1215G2496 Vigna mungo HOM05D007271 ORTHO05D009217 5.3e-85 318.2 229 72.9
Glyma.01G009700 Glycine max HOM05D007271 ORTHO05D009217 3.2e-82 308.9 230 72.6
Lj2g0009393 Lotus japonicus HOM05D007271 ORTHO05D009217 3.9e-80 302.0 226 72.1
Lalb_Chr05g0215551 Lupinus albus HOM05D007271 ORTHO05D009217 4.1e-77 292.0 186 81.2
TPR.G28964 Trifolium pratense HOM05D007271 ORTHO05D009217 3.0e-56 222.6 181 63.0
Medtr8g071050 Medicago truncatula HOM05D007271 ORTHO05D009217 6.7e-56 221.5 179 60.9
Psat4g109960 Pisum sativum HOM05D007271 ORTHO05D009217 1.5e-55 220.3 182 59.9
Lj4g0015364 Lotus japonicus HOM05D007271 ORTHO05D009217 5.7e-55 218.4 176 63.6
Glyma.16G103000 Glycine max HOM05D007271 ORTHO05D009217 6.3e-54 214.9 175 62.3
arahy.Tifrunner.gnm1.ann1.3Y0Q41 Arachis hypogaea HOM05D007271 ORTHO05D009217 6.1e-49 198.4 167 64.1
VMungo0251G3497 Vigna mungo HOM05D007271 ORTHO05D009217 1.0e-48 197.6 169 59.2
Phvul.002G132600 Phaseolus vulgaris HOM05D007271 ORTHO05D009217 4.0e-48 195.7 117 82.1
Phvul.003G273200 Phaseolus vulgaris HOM05D007271 ORTHO05D009217 4.4e-47 192.2 170 56.5
Dinv29036 Davidia involucrata HOM05D007271 ORTHO05D009217 1.1e-45 187.6 180 52.8
arahy.Tifrunner.gnm1.ann1.CI81A0 Arachis hypogaea HOM05D007271 ORTHO05D009217 9.1e-45 184.5 169 61.5
CiPaw.12G070300 Carya illinoinensis HOM05D007271 ORTHO05D009217 9.1e-45 184.5 183 53.6
Cfa012560 Carpinus fangiana HOM05D007271 ORTHO05D009217 1.2e-44 184.1 180 53.3
Haze_08102 Corylus avellana HOM05D007271 ORTHO05D009217 2.0e-44 183.3 184 54.3
Hma1.2p1_0635F.1_g193160 Hydrangea macrophylla HOM05D007271 ORTHO05D009217 2.0e-44 183.3 174 56.3
Nitab4.5_0005761g0060 Nicotiana tabacum HOM05D007271 ORTHO05D009217 8.5e-43 177.9 180 53.3
Oeu061071.1 Olea europaea HOM05D007271 ORTHO05D009217 1.1e-42 177.6 179 53.1
Potri.001G133700 Populus trichocarpa HOM05D007271 ORTHO05D009217 1.5e-42 177.2 184 51.6
Prupe.5G024200 Prunus persica HOM05D007271 ORTHO05D009217 1.9e-42 176.8 180 51.7
SalBow4G2871 Salvia bowleyana HOM05D007271 ORTHO05D009217 9.4e-42 174.5 181 50.8
GSVIVG01026362001 Vitis vinifera HOM05D007271 ORTHO05D009217 9.4e-42 174.5 181 50.3
Cc08_g04070 Coffea canephora HOM05D007271 ORTHO05D009217 1.6e-41 173.7 177 52.0
Eucgr.E01257 Eucalyptus grandis HOM05D007271 ORTHO05D009217 1.6e-41 173.7 172 51.7
Actinidia14763 Actinidia chinensis HOM05D007271 ORTHO05D009217 2.7e-41 172.9 181 51.4
Eucgr.D02621 Eucalyptus grandis HOM05D007271 ORTHO05D009217 2.7e-41 172.9 181 50.3
CsaV3_3G001170 Cucumis sativus L. HOM05D007271 ORTHO05D009217 3.6e-41 172.6 180 51.1
PGR042G3154 Punica granatum HOM05D007271 ORTHO05D009217 4.7e-41 172.2 180 52.2
Migut.A00579 Erythranthe guttata HOM05D007271 ORTHO05D009217 6.1e-41 171.8 185 49.7
Nitab4.5_0000109g0130 Nicotiana tabacum HOM05D007271 ORTHO05D009217 8.0e-41 171.4 180 51.1
FAN08G2102 Fragaria x ananassa HOM05D007271 ORTHO05D009217 1.4e-40 170.6 179 52.0
ClCG10G001150 Citrullus lanatus HOM05D007271 ORTHO05D009217 1.8e-40 170.2 179 50.8
Cpa.g.sc104.82 Carica papaya HOM05D007271 ORTHO05D009217 2.3e-40 169.9 182 50.0
FAN04G0635 Fragaria x ananassa HOM05D007271 ORTHO05D009217 3.0e-40 169.5 179 51.4
FAN13G0287 Fragaria x ananassa HOM05D007271 ORTHO05D009217 3.0e-40 169.5 179 51.4
TAR375G0504 Trochodendron aralioides HOM05D007271 ORTHO05D009217 3.0e-40 169.5 181 48.6
MELO3C013807.2 Cucumis melo HOM05D007271 ORTHO05D009217 4.0e-40 169.1 179 50.8
Lj8A323T49 Lonicera japonica HOM05D007271 ORTHO05D009217 5.2e-40 168.7 180 52.2
Peaxi162Scf00185g01619 Petunia axillaris HOM05D007271 ORTHO05D009217 5.2e-40 168.7 183 51.4
CANSAT21G2130 Cannabis sativa HOM05D007271 ORTHO05D009217 6.8e-40 168.3 186 52.2
FvH4_5g23600 Fragaria vesca HOM05D007271 ORTHO05D009217 1.2e-39 167.5 179 50.8
RcHm_v2.0_Chr7g0212901 Rosa chinensis HOM05D007271 ORTHO05D009217 1.2e-39 167.5 179 50.8
Oeu001193.1 Olea europaea HOM05D007271 ORTHO05D009217 1.5e-39 167.2 182 51.6
DCAR_008194 Daucus carota HOM05D007271 ORTHO05D009217 2.6e-39 166.4 181 48.1
FAN18G2511 Fragaria x ananassa HOM05D007271 ORTHO05D009217 3.4e-39 166.0 179 50.3
Aqoxy7G00878 Aquilegia oxysepala HOM05D007271 ORTHO05D009217 4.4e-39 165.6 181 50.3
Duzib068G0217 Durio zibethinus HOM05D007271 ORTHO05D009217 4.4e-39 165.6 180 48.9
Gohir.A12G204300 Gossypium hirsutum HOM05D007271 ORTHO05D009217 3.7e-38 162.5 181 49.7
Manes.17G011200 Manihot esculenta HOM05D007271 ORTHO05D009217 3.7e-38 162.5 184 50.5
Thecc.03G314300 Theobroma cacao HOM05D007271 ORTHO05D009217 3.7e-38 162.5 180 48.9
unitig_747.g21928 Utricularia gibba HOM05D007271 ORTHO05D009217 6.3e-38 161.8 174 50.0
CAN.G773.8 Capsicum annuum HOM05D007271 ORTHO05D009217 8.3e-38 161.4 189 48.7
FAN18G2097 Fragaria x ananassa HOM05D007271 ORTHO05D009217 1.4e-37 160.6 179 49.2
Sopen08g024690 Solanum pennellii HOM05D007271 ORTHO05D009217 1.8e-37 160.2 168 51.2
PGSC0003DMG400035874 Solanum tuberosum HOM05D007271 ORTHO05D009217 1.8e-37 160.2 168 51.2
Gohir.D12G206700 Gossypium hirsutum HOM05D007271 ORTHO05D009217 3.1e-37 159.5 181 49.7
Peaxi162Scf00408g00227 Petunia axillaris HOM05D007271 ORTHO05D009217 3.1e-37 159.5 186 47.3
TWI14G0446 Tripterygium wilfordii HOM05D007271 ORTHO05D009217 4.1e-37 159.1 179 49.2
Solyc08g076040.2 Solanum lycopersicum HOM05D007271 ORTHO05D009217 7.0e-37 158.3 168 50.6
Gohir.D08G173300 Gossypium hirsutum HOM05D007271 ORTHO05D009217 9.1e-37 157.9 175 48.0
unitig_748.g8136 Utricularia gibba HOM05D007271 ORTHO05D009217 9.1e-37 157.9 174 48.9
Ciclev10003885m.g Citrus clementina HOM05D007271 ORTHO05D009217 1.2e-36 157.5 183 48.6
Gorai.008G222100 Gossypium raimondii HOM05D007271 ORTHO05D009217 1.2e-36 157.5 181 49.2
DCAR_004256 Daucus carota HOM05D007271 ORTHO05D009217 1.6e-36 157.1 181 44.8
Gorai.004G180600 Gossypium raimondii HOM05D007271 ORTHO05D009217 1.6e-36 157.1 175 48.0
MD00G1000300 Malus domestica HOM05D007271 ORTHO05D009217 1.6e-36 157.1 185 45.9
SalBow8G4630 Salvia bowleyana HOM05D007271 ORTHO05D009217 2.7e-36 156.4 182 47.3
Gohir.A08G152200 Gossypium hirsutum HOM05D007271 ORTHO05D009217 3.5e-36 156.0 180 46.1
MBI04_g36029_MAGBIO Magnolia biondii HOM05D007271 ORTHO05D009217 2.3e-35 153.3 181 43.6
Sed0019673 Sechium edule HOM05D007271 ORTHO05D009217 1.5e-34 150.6 179 49.7
arahy.Tifrunner.gnm1.ann1.RGNF9W Arachis hypogaea HOM05D007271 ORTHO05D009217 4.2e-34 149.1 146 65.8
arahy.Tifrunner.gnm1.ann1.WVYD0V Arachis hypogaea HOM05D007271 ORTHO05D009217 4.2e-34 149.1 146 65.8
Atru.chr6.1575 Acer truncatum HOM05D007271 ORTHO05D009217 1.2e-33 147.5 180 46.1
HanXRQChr17g0537681 Helianthus annuus HOM05D007271 ORTHO05D009217 4.4e-31 139.0 175 48.0
ECA246G0509 Erigeron canadensis HOM05D007271 ORTHO05D009217 4.9e-30 135.6 178 43.3
PGR031G3520 Punica granatum HOM05D007271 ORTHO05D009217 6.3e-30 135.2 155 46.5
Lsat_1_v5_gn_3_20940 Lactuca sativa HOM05D007271 ORTHO05D009217 8.3e-30 134.8 165 44.8
Ca_22492_v3 Cicer arietinum L. HOM05D007271 ORTHO05D009217 5.4e-29 132.1 112 60.7
Os06g0113900 Oryza sativa ssp. japonica HOM05D007271 ORTHO05D009217 1.6e-25 120.6 174 42.5
Hma1.2p1_1486F.1_g286550 Hydrangea macrophylla HOM05D007271 ORTHO05D009217 1.4e-24 117.5 125 52.8
Zm00001eb268890 Zea mays HOM05D007271 ORTHO05D009217 1.4e-24 117.5 181 39.8
PSO717G0049 Papaver somniferum HOM05D007271 ORTHO05D009217 2.9e-22 109.8 180 38.3
QL12p000436 Quercus lobata HOM05D007271 ORTHO05D009217 1.3e-19 100.9 94 58.5
unitig_32.g10968 Utricularia gibba HOM05D007271 ORTHO05D009217 2.8e-17 93.2 79 55.7
Nitab4.5_0000809g0020 Nicotiana tabacum HOM05D007271 ORTHO05D009217 1.4e-16 90.9 92 55.4
SEGI_35026 Sequoiadendron giganteum HOM05D007271 ORTHO05D009217 6.4e-14 82.0 156 32.7
HanXRQChr06g0172971 Helianthus annuus HOM05D007271 ORTHO05D009217 1.1e-13 81.3 78 52.6
QL12p000442 Quercus lobata HOM05D007271 ORTHO05D009217 2.1e-12 77.0 97 41.2
COL.COLO4_16886 Corchorus olitorius HOM05D007271 ORTHO05D009217 3.3e-10 69.7 88 38.6
PSO675G5865 Papaver somniferum HOM05D007271 ORTHO05D009217 8.1e-09 65.1 117 36.8
Ciclev10003404m.g Citrus clementina HOM05D007271 ORTHO05D009217 2.2e-06 57.0 178 28.7


User provided reference genes

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