Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9026 Trifolium pratense HOM05D013451 ORTHO05D009679 7.0e-114 414.1 226 100.0
TPR.G11122 Trifolium pratense HOM05D000017 ORTHO05D000013 7.9e-65 251.1 218 56.0
TPR.G14615 Trifolium pratense HOM05D013451 ORTHO05D009679 2.6e-52 209.5 219 47.9
TPR.G15353 Trifolium pratense HOM05D000017 ORTHO05D000013 5.1e-40 168.7 227 41.4
TPR.G36775 Trifolium pratense HOM05D000017 ORTHO05D000013 2.4e-37 159.8 139 53.2
TPR.G18584 Trifolium pratense HOM05D000017 ORTHO05D007253 2.0e-36 156.8 112 66.1
TPR.G26350 Trifolium pratense HOM05D000017 ORTHO05D000013 1.1e-34 151.0 139 51.1
TPR.G1787 Trifolium pratense HOM05D000017 ORTHO05D000013 2.1e-33 146.7 217 38.7
TPR.G31011 Trifolium pratense HOM05D000017 ORTHO05D000013 3.9e-32 142.5 121 52.1
TPR.G35471 Trifolium pratense HOM05D000017 ORTHO05D009679 3.9e-32 142.5 115 57.4
TPR.G40010 Trifolium pratense HOM05D013451 ORTHO05D009679 1.5e-31 140.6 110 58.2
TPR.G9683 Trifolium pratense HOM05D024077 ORTHO05D009679 5.7e-31 138.7 147 46.9
Ca_12624_v3 Cicer arietinum L. HOM05D010632 ORTHO05D007253 2.2e-30 136.7 145 44.8
Ca_03505_v3 Cicer arietinum L. HOM05D008341 ORTHO05D009679 6.3e-30 135.2 182 38.5
Medtr1g088620 Medicago truncatula HOM05D000483 ORTHO05D000158 5.5e-26 122.1 123 48.8
Ca_22902_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 1.4e-24 117.5 197 34.0
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 4.0e-24 115.9 121 44.6
VMungo1080G0784 Vigna mungo HOM05D013451 ORTHO05D009679 2.8e-22 109.8 211 30.8
Ca_06856_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 1.6e-20 104.0 114 43.0
arahy.Tifrunner.gnm1.ann1.31P59F Arachis hypogaea HOM05D000017 ORTHO05D000013 4.4e-15 85.9 117 38.5
VMungo1215G1165 Vigna mungo HOM05D000017 ORTHO05D000013 6.3e-14 82.0 140 34.3
Phvul.005G097700 Phaseolus vulgaris HOM05D013451 ORTHO05D009679 1.2e-12 77.8 78 46.2
TPR.G12973 Trifolium pratense HOM05D000058 ORTHO05D009679 5.9e-12 75.5 97 37.1
Ca_06640_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 7.7e-12 75.1 144 29.9
QL08p005699 Quercus lobata HOM05D000017 ORTHO05D007253 7.7e-12 75.1 223 26.0
Ah.13g072940 Amaranthus hybridus HOM05D000017 ORTHO05D007253 1.0e-11 74.7 213 27.2
Phvul.007G147700 Phaseolus vulgaris HOM05D013451 ORTHO05D009679 1.0e-11 74.7 107 36.4
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 1.3e-11 74.3 221 26.2
Medtr4g055480 Medicago truncatula HOM05D024077 ORTHO05D009679 1.3e-11 74.3 146 30.8
Medtr8g464080 Medicago truncatula HOM05D023704 ORTHO05D020438 2.9e-11 73.2 145 31.0
QL08p013497 Quercus lobata HOM05D000017 ORTHO05D007253 3.8e-11 72.8 223 25.6
QL08p006036 Quercus lobata HOM05D000017 ORTHO05D007253 6.5e-11 72.0 223 25.6
SHI45280 Sapria himalayana HOM05D000017 ORTHO05D000013 1.9e-10 70.5 158 27.8
Ca_14871_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 7.2e-10 68.6 68 48.5
Glyma.20G112000 Glycine max HOM05D013451 ORTHO05D009679 7.2e-10 68.6 114 33.3
QL02p062658 Quercus lobata HOM05D000017 ORTHO05D009679 7.2e-10 68.6 224 24.6
Lj6g0013797 Lotus japonicus HOM05D000017 ORTHO05D000013 1.6e-09 67.4 143 26.6
arahy.Tifrunner.gnm1.ann1.20XN21 Arachis hypogaea HOM05D030406 ORTHO05D009679 2.7e-09 66.6 157 24.8
EL10Ac6g14585 Beta vulgaris HOM05D000017 ORTHO05D007253 2.7e-09 66.6 213 26.8
TWI18G0813 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.7e-09 66.6 100 34.0
Peaxi162Scf00351g00219 Petunia axillaris HOM05D005268 ORTHO05D011324 4.7e-09 65.9 226 23.9
TWI18G0585 Tripterygium wilfordii HOM05D008341 ORTHO05D009679 6.1e-09 65.5 115 33.9
QL10p055041 Quercus lobata HOM05D000017 ORTHO05D009679 8.0e-09 65.1 223 23.8
Dinv20712 Davidia involucrata HOM05D008341 ORTHO05D009679 1.4e-08 64.3 160 25.6
Lj6g0025034 Lotus japonicus HOM05D000017 ORTHO05D000013 1.4e-08 64.3 128 26.6
AT1G64253 Arabidopsis thaliana HOM05D000017 ORTHO05D000013 5.2e-08 62.4 121 33.1
Dinv23640 Davidia involucrata HOM05D008341 ORTHO05D009679 6.8e-08 62.0 160 26.2
Rhsim02G0019500 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.8e-08 62.0 93 31.2
AL2G10710 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 8.8e-08 61.6 121 28.9
AL2G10700 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 1.5e-07 60.8 122 33.6
Dinv38149 Davidia involucrata HOM05D008341 ORTHO05D009679 2.6e-07 60.1 160 24.4
A09p14860 Brassica napus HOM05D000017 ORTHO05D000013 3.4e-07 59.7 69 37.7
Phvul.005G052300 Phaseolus vulgaris HOM05D013451 ORTHO05D009679 3.4e-07 59.7 74 39.2
Ah.02g115090 Amaranthus hybridus HOM05D000017 ORTHO05D000013 5.7e-07 58.9 69 37.7
C07p04860 Brassica napus HOM05D000017 ORTHO05D000013 9.8e-07 58.2 151 25.2
BolC7t40885H Brassica oleracea HOM05D000017 ORTHO05D000013 9.8e-07 58.2 151 25.2
Peaxi162Scf00338g00523 Petunia axillaris HOM05D005268 ORTHO05D011324 9.8e-07 58.2 216 23.6
TWI09G0713 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.8e-07 58.2 151 25.2
TWI31G0342 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.8e-07 58.2 151 25.2
TWI75G0917 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.8e-07 58.2 151 25.2
arahy.Tifrunner.gnm1.ann1.16AZZ7 Arachis hypogaea HOM05D030406 ORTHO05D009679 1.7e-06 57.4 97 32.0
BraA09t37132Z Brassica rapa HOM05D000017 ORTHO05D000013 1.7e-06 57.4 122 28.7
Dinv16753 Davidia involucrata HOM05D008341 ORTHO05D009679 1.7e-06 57.4 160 25.0
QL04p066041 Quercus lobata HOM05D000017 ORTHO05D000013 1.7e-06 57.4 232 21.6
TWI75G0784 Tripterygium wilfordii HOM05D000017 ORTHO05D007253 2.2e-06 57.0 151 25.2
QL03p010991 Quercus lobata HOM05D000017 ORTHO05D000013 2.8e-06 56.6 217 22.6
TWI36G0864 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.8e-06 56.6 151 24.5
CSS0025680 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.7e-06 56.2 213 19.2
CSS0008184 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.9e-06 55.8 213 19.2
BolC7t40882H Brassica oleracea HOM05D000017 ORTHO05D000013 6.3e-06 55.5 69 36.2
CSS0001578 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.3e-06 55.5 213 19.2
CSS0007981 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.3e-06 55.5 213 19.2
CSS0014296 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.3e-06 55.5 213 19.2
CSS0042409 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.3e-06 55.5 213 19.2
C09p17990 Brassica napus HOM05D000017 ORTHO05D000013 8.3e-06 55.1 123 24.4


User provided reference genes

Program Settings