Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G902 Trifolium pratense HOM05D005197 ORTHO05D006263 1.5e-48 196.1 110 100.0
TPR.G17242 Trifolium pratense HOM05D005197 ORTHO05D006263 1.1e-43 179.9 110 88.2
TPR.G36193 Trifolium pratense HOM05D005197 ORTHO05D006263 8.6e-41 170.2 110 86.4
Psat2g143800 Pisum sativum HOM05D005197 ORTHO05D006263 2.1e-34 149.1 110 79.1
Medtr5g026380 Medicago truncatula HOM05D005197 ORTHO05D006263 1.7e-33 146.0 110 77.3
TPR.G36141 Trifolium pratense HOM05D005197 ORTHO05D006263 3.4e-29 131.7 75 93.3
Lalb_Chr05g0215321 Lupinus albus HOM05D005197 ORTHO05D006263 1.0e-25 120.2 94 74.5
Glyma.01G151000 Glycine max HOM05D005197 ORTHO05D006263 8.1e-23 110.5 110 61.8
Glyma.09G216000 Glycine max HOM05D005197 ORTHO05D006263 6.8e-22 107.5 112 61.6
Lj2g0019897 Lotus japonicus HOM05D005197 ORTHO05D006263 8.9e-22 107.1 83 73.5
Phvul.002G124800 Phaseolus vulgaris HOM05D005197 ORTHO05D006263 2.1e-18 95.9 81 70.4
VMungo1215G1205 Vigna mungo HOM05D005197 ORTHO05D006263 7.8e-18 94.0 84 66.7
QL12p002196 Quercus lobata HOM05D005197 ORTHO05D006263 3.9e-17 91.7 84 61.9
CiPaw.11G075300 Carya illinoinensis HOM05D005197 ORTHO05D006263 1.5e-16 89.7 101 52.5
Haze_08014 Corylus avellana HOM05D005197 ORTHO05D006263 2.5e-16 89.0 96 59.4
Haze_08012 Corylus avellana HOM05D005197 ORTHO05D006263 5.6e-16 87.8 96 58.3
Cfa012646 Carpinus fangiana HOM05D005197 ORTHO05D006263 1.6e-15 86.3 93 59.1
arahy.Tifrunner.gnm1.ann1.G7W534 Arachis hypogaea HOM05D005197 ORTHO05D006263 6.2e-15 84.3 100 52.0
arahy.Tifrunner.gnm1.ann1.JB60CZ Arachis hypogaea HOM05D005197 ORTHO05D006263 6.2e-15 84.3 100 52.0
Nn3g19194 Nelumbo nucifera HOM05D005197 ORTHO05D006263 1.1e-14 83.6 82 53.7
TAR636G3359 Trochodendron aralioides HOM05D005197 ORTHO05D006263 1.8e-14 82.8 83 59.0
Actinidia25715 Actinidia chinensis HOM05D005197 ORTHO05D006263 1.4e-11 73.2 54 75.9
CAN.G22.3 Capsicum annuum HOM05D005197 ORTHO05D006263 5.4e-11 71.2 80 51.2
SGA_v2.0_scaffold121G33048 Striga asiatica HOM05D005197 ORTHO05D006263 7.1e-11 70.9 81 48.1
Nn3g19195 Nelumbo nucifera HOM05D005197 ORTHO05D006263 2.1e-10 69.3 99 43.4
TAR629G2553 Trochodendron aralioides HOM05D005197 ORTHO05D006263 2.1e-10 69.3 84 47.6
PGSC0003DMG400041236 Solanum tuberosum HOM05D005197 ORTHO05D006263 1.0e-09 67.0 80 48.8
TWI60G1368 Tripterygium wilfordii HOM05D005197 ORTHO05D006263 3.0e-09 65.5 81 50.6
ATR0369G001 Amborella trichopoda HOM05D005197 ORTHO05D006263 3.9e-09 65.1 89 42.7
Sopen07g029250 Solanum pennellii HOM05D005197 ORTHO05D006263 5.1e-09 64.7 80 46.2
Cfa012647 Carpinus fangiana HOM05D005197 ORTHO05D006263 6.6e-09 64.3 79 51.9
TWI32G0688 Tripterygium wilfordii HOM05D005197 ORTHO05D006263 6.6e-09 64.3 80 48.8
Haze_08011 Corylus avellana HOM05D005197 ORTHO05D006263 8.7e-09 63.9 79 51.9
Rhsim05G0122600 Rhododendron simsii HOM05D005197 ORTHO05D006263 8.7e-09 63.9 80 43.8
vmacro19764 Vaccinium macrocarpon HOM05D005197 ORTHO05D006263 8.7e-09 63.9 83 43.4
Peaxi162Scf00445g00001 Petunia axillaris HOM05D005197 ORTHO05D006263 1.1e-08 63.5 87 44.8
Ciclev10002053m.g Citrus clementina HOM05D005197 ORTHO05D006263 1.9e-08 62.8 96 47.9
Sed0006364 Sechium edule HOM05D005197 ORTHO05D006263 1.9e-08 62.8 90 41.1
SEGI_24603 Sequoiadendron giganteum HOM05D005197 ORTHO05D006263 4.3e-08 61.6 67 53.7
CiPaw.10G109500 Carya illinoinensis HOM05D005197 ORTHO05D006263 5.6e-08 61.2 79 45.6
Manes.17G005300 Manihot esculenta HOM05D005197 ORTHO05D006263 5.6e-08 61.2 99 37.4
arahy.Tifrunner.gnm1.ann1.11I9TD Arachis hypogaea HOM05D005197 ORTHO05D006263 7.3e-08 60.8 80 50.0
arahy.Tifrunner.gnm1.ann1.CK7EWS Arachis hypogaea HOM05D005197 ORTHO05D006263 7.3e-08 60.8 80 50.0
Nitab4.5_0000183g0040 Nicotiana tabacum HOM05D005197 ORTHO05D006263 7.3e-08 60.8 85 43.5
QL12p002187 Quercus lobata HOM05D005197 ORTHO05D006263 7.3e-08 60.8 89 41.6
Nitab4.5_0004181g0010 Nicotiana tabacum HOM05D005197 ORTHO05D006263 9.6e-08 60.5 80 45.0
Oeu057151.1 Olea europaea HOM05D005197 ORTHO05D006263 9.6e-08 60.5 81 45.7
Atru.chr6.2120 Acer truncatum HOM05D005197 ORTHO05D006263 1.3e-07 60.1 92 43.5
Cc00_g01150 Coffea canephora HOM05D005197 ORTHO05D006263 1.6e-07 59.7 83 39.8
Potri.001G128600 Populus trichocarpa HOM05D005197 ORTHO05D006263 2.1e-07 59.3 96 42.7
CsaV3_4G006970 Cucumis sativus L. HOM05D005197 ORTHO05D006263 4.8e-07 58.2 90 40.0
MBI04_g30782_MAGBIO Magnolia biondii HOM05D005197 ORTHO05D006263 4.8e-07 58.2 54 57.4
RcHm_v2.0_Chr7g0214771 Rosa chinensis HOM05D005197 ORTHO05D006263 4.8e-07 58.2 83 44.6
Nn1g09229 Nelumbo nucifera HOM05D005197 ORTHO05D006263 6.2e-07 57.8 84 40.5
SalBow8G0134 Salvia bowleyana HOM05D005197 ORTHO05D006263 1.1e-06 57.0 88 44.3
SalBow8G0427 Salvia bowleyana HOM05D005197 ORTHO05D006263 1.1e-06 57.0 88 44.3
ClCG07G011270 Citrullus lanatus HOM05D005197 ORTHO05D006263 1.8e-06 56.2 80 41.2
MELO3C016247.2 Cucumis melo HOM05D005197 ORTHO05D006263 1.8e-06 56.2 90 38.9
DCAR_030955 Daucus carota HOM05D005197 ORTHO05D006263 1.8e-06 56.2 80 45.0
CANSAT01G1003 Cannabis sativa HOM05D005197 ORTHO05D006263 2.4e-06 55.8 81 42.0
Solyc07g055880.1 Solanum lycopersicum HOM05D005197 ORTHO05D006263 2.4e-06 55.8 56 51.8
Cpa.g.sc305.1 Carica papaya HOM05D005197 ORTHO05D006263 3.1e-06 55.5 89 42.7
MSTRG.13922 Avicennia marina HOM05D005197 ORTHO05D006263 4.0e-06 55.1 87 39.1
Eucgr.E01175 Eucalyptus grandis HOM05D012124 ORTHO05D006263 5.3e-06 54.7 67 49.3
THA.LOC104824415 Tarenaya hassleriana HOM05D012124 ORTHO05D014419 5.3e-06 54.7 85 44.7
Glyma.09G215900 Glycine max HOM05D005197 ORTHO05D006263 6.9e-06 54.3 80 46.2
CDE11G1044 Ceratophyllum demersum HOM05D005197 ORTHO05D006263 9.0e-06 53.9 91 39.6


User provided reference genes

Program Settings