Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9018 Trifolium pratense HOM05D003057 ORTHO05D003904 3.6e-85 318.2 156 100.0
Lj5g0003986 Lotus japonicus HOM05D003057 ORTHO05D003904 1.1e-28 130.6 105 61.0
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 3.9e-23 112.1 105 57.1
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 5.1e-23 111.7 105 53.3
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 1.5e-22 110.2 118 50.8
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 2.0e-22 109.8 105 53.3
COL.COLO4_07828 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.6e-22 109.4 109 50.5
COL.COLO4_28150 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.4e-22 108.6 106 56.6
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.2e-21 106.3 106 55.7
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.3e-21 104.8 103 55.3
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 6.3e-21 104.8 105 51.4
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 3.1e-20 102.4 106 53.8
Rhsim03G0157600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.2e-19 100.5 108 50.9
TWI15G0994 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 2.0e-19 99.8 106 48.1
PSO063G5055 Papaver somniferum HOM05D003057 ORTHO05D003904 2.6e-19 99.4 117 41.9
COL.COLO4_30277 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.5e-19 98.6 104 49.0
COL.COLO4_37925 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.5e-19 98.6 101 52.5
RhsimUnG0227600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.0e-18 97.4 108 44.4
COL.COLO4_20007 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.7e-18 96.7 108 45.4
Rhsim01G0178000 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.2e-18 96.3 108 43.5
PSO170G4809 Papaver somniferum HOM05D003057 ORTHO05D003904 3.8e-18 95.5 126 39.7
PSO339G1811 Papaver somniferum HOM05D000294 ORTHO05D000177 3.8e-18 95.5 126 39.7
PSO832G1972 Papaver somniferum HOM05D000294 ORTHO05D000177 3.8e-18 95.5 126 39.7
PSO832G3441 Papaver somniferum HOM05D000294 ORTHO05D000177 3.8e-18 95.5 126 39.7
PSO170G5731 Papaver somniferum HOM05D003057 ORTHO05D003904 5.0e-18 95.1 108 44.4
Rhsim10G0170800 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.0e-18 95.1 108 42.6
COL.COLO4_08929 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.5e-18 94.7 108 43.5
ECA234G0491 Erigeron canadensis HOM05D003057 ORTHO05D003904 6.5e-18 94.7 103 49.5
TPR.G34813 Trifolium pratense HOM05D003057 ORTHO05D003904 6.5e-18 94.7 104 49.0
RhsimUnG0046200 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.5e-18 94.4 108 42.6
CAN.G960.86 Capsicum annuum HOM05D003057 ORTHO05D003904 1.1e-17 94.0 104 45.2
PSO210G2781 Papaver somniferum HOM05D003057 ORTHO05D003904 1.4e-17 93.6 103 49.5
PSO063G0536 Papaver somniferum HOM05D003057 ORTHO05D003904 1.9e-17 93.2 105 47.6
COL.COLO4_09308 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.5e-17 92.8 103 44.7
PSO675G0308 Papaver somniferum HOM05D003057 ORTHO05D003904 2.5e-17 92.8 105 47.6
PSO384G2563 Papaver somniferum HOM05D003057 ORTHO05D003904 3.2e-17 92.4 123 39.0
PSO761G0015 Papaver somniferum HOM05D003057 ORTHO05D003904 3.2e-17 92.4 105 47.6
Rhsim02G0047600 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.2e-17 92.4 102 48.0
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.2e-17 92.4 108 43.5
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.2e-17 92.4 108 43.5
Rhsim11G0159700 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.2e-17 92.4 108 43.5
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.2e-17 92.4 108 43.5
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 4.2e-17 92.0 103 48.5
PSO017G6481 Papaver somniferum HOM05D003057 ORTHO05D003904 4.2e-17 92.0 103 49.5
PSO170G5304 Papaver somniferum HOM05D003057 ORTHO05D003904 4.2e-17 92.0 103 49.5
PSO357G0652 Papaver somniferum HOM05D003057 ORTHO05D003904 4.2e-17 92.0 103 49.5
PSO832G2073 Papaver somniferum HOM05D003057 ORTHO05D003904 9.4e-17 90.9 103 48.5
PSO339G0160 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-16 90.5 106 48.1
PSO210G2682 Papaver somniferum HOM05D003057 ORTHO05D003904 1.6e-16 90.1 105 47.6
PSO357G0662 Papaver somniferum HOM05D003057 ORTHO05D003904 2.1e-16 89.7 105 46.7
TWI31G1500 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 4.7e-16 88.6 104 47.1
PSO339G2793 Papaver somniferum HOM05D003057 ORTHO05D003904 8.0e-16 87.8 103 46.6
PSO339G6256 Papaver somniferum HOM05D003057 ORTHO05D003904 8.0e-16 87.8 103 47.6
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 1.4e-15 87.0 105 51.4
Hma1.2p1_0035F.1_g021680 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 1.4e-15 87.0 108 49.1
PSO339G3716 Papaver somniferum HOM05D003057 ORTHO05D003904 2.3e-15 86.3 103 46.6
QL05p017993 Quercus lobata HOM05D003057 ORTHO05D003904 2.3e-15 86.3 109 42.2
PSO170G1938 Papaver somniferum HOM05D003057 ORTHO05D003904 3.0e-15 85.9 126 35.7
PSO478G2060 Papaver somniferum HOM05D003057 ORTHO05D003904 5.2e-15 85.1 103 46.6
PSO017G5767 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-14 84.0 103 46.6
PSO151G0074 Papaver somniferum HOM05D003057 ORTHO05D003904 2.6e-14 82.8 103 42.7
PSO170G6344 Papaver somniferum HOM05D003057 ORTHO05D003904 2.6e-14 82.8 126 34.9
PSO384G4427 Papaver somniferum HOM05D003057 ORTHO05D003904 2.6e-14 82.8 126 34.9
Rhsim11G0002500 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.6e-14 82.8 84 51.2
PSO210G0544 Papaver somniferum HOM05D003057 ORTHO05D003904 4.4e-14 82.0 105 43.8
Ah.14g084280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.7e-14 81.6 110 40.0
PSO017G2586 Papaver somniferum HOM05D003057 ORTHO05D003904 7.4e-14 81.3 103 41.7
Ah.03g145610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.7e-14 80.9 110 40.0
Ah.15g097480 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.7e-14 80.9 110 40.9
PSO478G2424 Papaver somniferum HOM05D003057 ORTHO05D003904 9.7e-14 80.9 104 41.3
PSO724G1375 Papaver somniferum HOM05D003057 ORTHO05D003904 9.7e-14 80.9 94 48.9
TPR.G14797 Trifolium pratense HOM05D003057 ORTHO05D003904 1.3e-13 80.5 78 48.7
Ah.10g032920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.7e-13 80.1 103 45.6
Ah.11g046560 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.7e-13 80.1 103 46.6
PSO339G0276 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-13 79.7 94 46.8
Ah.13g068770 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.8e-13 79.3 110 39.1
BcaC08g45994 Brassica carinata HOM05D003057 ORTHO05D003904 2.8e-13 79.3 102 49.0
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 2.8e-13 79.3 80 55.0
Ah.06g182610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.7e-13 79.0 103 44.7
Rhsim01G0115600 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.7e-13 79.0 112 40.2
Rhsim06G0137900 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.7e-13 79.0 63 57.1
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 4.8e-13 78.6 103 40.8
Ah.03g140530 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.3e-13 78.2 110 39.1
Ah.07g201230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.2e-13 77.8 110 38.2
Ah.10g026650 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.2e-13 77.8 110 39.1
PSO017G4793 Papaver somniferum HOM05D003057 ORTHO05D003904 8.2e-13 77.8 82 47.6
PSO761G0317 Papaver somniferum HOM05D003057 ORTHO05D003904 8.2e-13 77.8 107 42.1
PSO017G4412 Papaver somniferum HOM05D003057 ORTHO05D003904 1.4e-12 77.0 82 48.8
Ah.16g108140 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.8e-12 76.6 112 38.4
PSO832G1677 Papaver somniferum HOM05D003057 ORTHO05D003904 2.4e-12 76.3 103 40.8
Ah.03g143550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.1e-12 75.5 103 43.7
COL.COLO4_22596 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.1e-12 75.5 88 47.7
PSO017G3866 Papaver somniferum HOM05D003057 ORTHO05D003904 4.1e-12 75.5 83 49.4
Rhsim09G0063100 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.1e-12 75.5 80 52.5
Ah.01g013550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.3e-12 75.1 110 38.2
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.3e-12 75.1 71 56.3
Ah.05g175220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.0e-12 74.7 103 44.7
Ah.06g187260 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.0e-12 74.7 110 38.2
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.0e-12 74.7 63 55.6
Ah.03g144340 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.1e-12 74.3 103 42.7
Ah.11g041830 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.1e-12 74.3 103 42.7
COL.COLO4_21501 Corchorus olitorius HOM05D003057 ORTHO05D003904 9.1e-12 74.3 63 57.1
PSO384G0803 Papaver somniferum HOM05D003057 ORTHO05D003904 9.1e-12 74.3 83 48.2
Ah.04g162690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.6e-11 72.8 103 37.9
Ah.06g181160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.6e-11 72.8 127 38.6
Ah.13g067120 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.5e-11 72.4 103 41.7
PSO063G5105 Papaver somniferum HOM05D003057 ORTHO05D003904 3.5e-11 72.4 95 42.1
Ah.04g164590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.9e-11 71.6 103 41.7
Ah.11g045640 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.9e-11 71.6 103 41.7
Ah.06g181680 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.7e-11 71.2 103 36.9
Rhsim05G0202400 Rhododendron simsii HOM05D001226 ORTHO05D001078 7.7e-11 71.2 105 40.0
COL.COLO4_37789 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.0e-10 70.9 86 43.0
RhsimUnG0134200 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.7e-10 70.1 58 56.9
Ah.06g181920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.2e-10 69.7 103 41.7
Ah.15g097160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.2e-10 69.7 101 35.6
Rhsim12G0027300 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.2e-10 69.7 43 69.8
Ah.01g002160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.8e-10 68.9 101 42.6
Ah.10g032220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.0e-10 68.6 101 43.6
Ah.16g103350 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.0e-10 68.6 103 40.8
Ah.07g201280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.5e-10 68.2 101 42.6
Ah.06g184390 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.5e-10 67.8 104 36.5
Ah.01g013430 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-09 67.4 104 37.5
Ah.01g017940 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-09 67.4 104 36.5
Ah.03g142690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-09 67.4 104 37.5
Ah.04g155590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-09 67.4 104 36.5
Ah.04g158790 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-09 67.4 104 37.5
Rhsim02G0188200 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-09 67.4 158 29.7
Ah.01g023980 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.5e-09 66.2 101 34.7
Ah.07g202550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.5e-09 66.2 104 36.5
Ah.13g069490 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.5e-09 66.2 104 36.5
PSO675G7321 Papaver somniferum HOM05D003057 ORTHO05D003904 2.5e-09 66.2 56 57.1
Ah.16g106200 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.2e-09 65.9 108 36.1
Ah.07g196960 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.5e-09 65.1 104 35.6
COL.COLO4_35241 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.5e-09 65.1 57 63.2
COL.COLO4_37503 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.5e-09 65.1 78 42.3
Ah.07g206230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-08 63.9 101 41.6
Rhsim02G0188400 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.7e-08 62.0 63 46.0
Ah.07g202070 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.1e-08 61.6 104 38.5
TPR.G38366 Trifolium pratense HOM05D003057 ORTHO05D003904 8.0e-08 61.2 79 41.8
COL.COLO4_04362 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.8e-07 60.1 103 32.0
BcaC04g21929 Brassica carinata HOM05D003057 ORTHO05D003904 2.3e-07 59.7 79 43.0
QL01p049124 Quercus lobata HOM05D003057 ORTHO05D003904 2.3e-07 59.7 43 55.8
arahy.Tifrunner.gnm1.ann1.QZM42C Arachis hypogaea HOM05D000034 ORTHO05D002688 3.0e-07 59.3 45 57.8
SHI08288 Sapria himalayana HOM05D003057 ORTHO05D003904 3.0e-07 59.3 53 50.9
arahy.Tifrunner.gnm1.ann1.AAD92C Arachis hypogaea HOM05D000034 ORTHO05D002688 1.2e-06 57.4 43 58.1
Lj1g0022373 Lotus japonicus HOM05D000034 ORTHO05D002688 2.0e-06 56.6 33 66.7
PSO170G6610 Papaver somniferum HOM05D003057 ORTHO05D003904 2.0e-06 56.6 40 62.5
TPR.G14789 Trifolium pratense HOM05D003057 ORTHO05D003904 2.0e-06 56.6 75 42.7
arahy.Tifrunner.gnm1.ann1.G2X2VF Arachis hypogaea HOM05D000034 ORTHO05D002688 2.6e-06 56.2 118 32.2
arahy.Tifrunner.gnm1.ann1.ZJZP2C Arachis hypogaea HOM05D000034 ORTHO05D002688 3.3e-06 55.8 43 58.1
Lalb_Chr18g0055031 Lupinus albus HOM05D000034 ORTHO05D002688 7.5e-06 54.7 35 60.0
arahy.Tifrunner.gnm1.ann1.71FTPI Arachis hypogaea HOM05D000034 ORTHO05D002688 9.7e-06 54.3 43 53.5
arahy.Tifrunner.gnm1.ann1.7N13V0 Arachis hypogaea HOM05D000034 ORTHO05D002688 9.7e-06 54.3 43 53.5
arahy.Tifrunner.gnm1.ann1.C92MA9 Arachis hypogaea HOM05D000034 ORTHO05D002688 9.7e-06 54.3 39 59.0
arahy.Tifrunner.gnm1.ann1.HX5DKE Arachis hypogaea HOM05D000034 ORTHO05D002688 9.7e-06 54.3 129 32.6
arahy.Tifrunner.gnm1.ann1.ZA5JKI Arachis hypogaea HOM05D000034 ORTHO05D002688 9.7e-06 54.3 118 31.4


User provided reference genes

Program Settings