Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9017 Trifolium pratense HOM05D003057 ORTHO05D003904 2.9e-72 275.0 131 100.0
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 1.5e-36 156.4 106 67.9
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 5.8e-36 154.5 106 67.0
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.7e-35 152.9 119 62.2
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 4.9e-35 151.4 111 61.3
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 3.2e-34 148.7 118 57.6
Rhsim12G0027300 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.0e-33 144.4 119 56.3
Lj5g0003986 Lotus japonicus HOM05D003057 ORTHO05D003904 7.9e-33 144.1 93 67.7
Rhsim11G0020100 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.3e-32 143.3 118 56.8
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.7e-32 140.6 119 55.5
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.7e-32 140.6 119 55.5
Rhsim11G0159700 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.7e-32 140.6 119 55.5
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.7e-32 140.6 119 55.5
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 1.1e-31 140.2 116 59.5
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 3.3e-31 138.7 118 54.2
BcaC08g45994 Brassica carinata HOM05D003057 ORTHO05D003904 4.3e-31 138.3 118 54.2
TPR.G33575 Trifolium pratense HOM05D003057 ORTHO05D003904 4.3e-31 138.3 111 58.6
RhsimUnG0227600 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.4e-31 137.5 120 56.7
RhsimUnG0134200 Rhododendron simsii HOM05D003057 ORTHO05D003904 9.6e-31 137.1 120 56.7
COL.COLO4_37503 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.3e-30 136.7 107 57.0
Rhsim03G0157600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.6e-30 136.3 119 55.5
RhsimUnG0046200 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.6e-30 136.3 120 56.7
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.1e-30 136.0 109 59.6
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 2.8e-30 135.6 108 58.3
Rhsim01G0115600 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.8e-30 134.8 120 54.2
Rhsim09G0063100 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.2e-30 134.4 119 53.8
Rhsim10G0170800 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.2e-30 134.4 120 55.8
Rhsim06G0137900 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.8e-29 132.9 119 53.8
PSO675G7321 Papaver somniferum HOM05D003057 ORTHO05D003904 2.4e-29 132.5 116 56.0
Rhsim07G0167300 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.4e-29 132.5 120 53.3
COL.COLO4_20007 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.1e-29 132.1 108 54.6
PSO170G6652 Papaver somniferum HOM05D003057 ORTHO05D003904 3.1e-29 132.1 116 56.0
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.5e-28 129.8 119 52.9
SGA_v2.0_scaffold17G08157 Striga asiatica HOM05D003057 ORTHO05D003904 2.0e-28 129.4 112 55.4
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.6e-28 129.0 119 53.8
Rhsim09G0038900 Rhododendron simsii HOM05D009719 ORTHO05D003904 2.6e-28 129.0 105 56.2
COL.COLO4_08929 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.4e-28 128.6 116 50.9
Rhsim02G0188200 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.4e-28 128.6 105 57.1
COL.COLO4_37543 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.5e-28 128.3 119 53.8
COL.COLO4_37623 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.8e-28 127.9 103 58.3
Rhsim02G0188400 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.9e-27 124.8 113 52.2
Rhsim02G0047600 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.4e-27 124.4 108 54.6
Rhsim11G0002500 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.4e-27 124.4 108 55.6
COL.COLO4_07828 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.9e-26 122.9 132 50.0
Rhsim01G0178000 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.9e-26 122.9 119 51.3
Hma1.2p1_1282F.1_g272710 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 2.4e-26 122.5 115 53.0
COL.COLO4_27567 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.2e-26 122.1 121 53.7
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 5.5e-26 121.3 118 50.8
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 1.6e-25 119.8 118 50.0
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 7.9e-25 117.5 90 62.2
Rhsim08G0101000 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.0e-24 117.1 105 53.3
PSO151G0074 Papaver somniferum HOM05D003057 ORTHO05D003904 1.8e-24 116.3 113 48.7
PSO339G3646 Papaver somniferum HOM05D003057 ORTHO05D003904 3.9e-24 115.2 113 48.7
PSO339G6256 Papaver somniferum HOM05D003057 ORTHO05D003904 3.9e-24 115.2 116 47.4
PSO210G2781 Papaver somniferum HOM05D003057 ORTHO05D003904 5.1e-24 114.8 116 46.6
PSO013G0378 Papaver somniferum HOM05D003057 ORTHO05D003904 8.7e-24 114.0 113 48.7
PSO675G8645 Papaver somniferum HOM05D003057 ORTHO05D003904 8.7e-24 114.0 113 46.9
PSO832G2073 Papaver somniferum HOM05D003057 ORTHO05D003904 8.7e-24 114.0 115 47.8
COL.COLO4_21501 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.1e-23 113.6 78 64.1
PSO017G2586 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-23 113.6 113 46.9
PSO210G4431 Papaver somniferum HOM05D003057 ORTHO05D003904 1.5e-23 113.2 113 48.7
PSO724G1375 Papaver somniferum HOM05D003057 ORTHO05D003904 1.5e-23 113.2 116 46.6
BcaC04g21929 Brassica carinata HOM05D003057 ORTHO05D003904 2.5e-23 112.5 121 47.1
PSO170G6610 Papaver somniferum HOM05D003057 ORTHO05D003904 3.3e-23 112.1 116 46.6
PSO339G3716 Papaver somniferum HOM05D003057 ORTHO05D003904 3.3e-23 112.1 116 44.8
PSO357G0652 Papaver somniferum HOM05D003057 ORTHO05D003904 3.3e-23 112.1 118 47.5
TPR.G13641 Trifolium pratense HOM05D003057 ORTHO05D003904 7.4e-23 110.9 78 60.3
PSO017G6481 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-22 110.2 112 47.3
PSO170G5304 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-22 110.2 116 45.7
SGA_v2.0_scaffold16G07775 Striga asiatica HOM05D003057 ORTHO05D003904 1.6e-22 109.8 99 52.5
PSO384G2563 Papaver somniferum HOM05D003057 ORTHO05D003904 2.1e-22 109.4 108 50.0
TPR.G14797 Trifolium pratense HOM05D003057 ORTHO05D003904 2.1e-22 109.4 118 46.6
PSO832G4354 Papaver somniferum HOM05D003057 ORTHO05D003904 6.2e-22 107.8 106 48.1
PSO198G0152 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-21 107.1 115 48.7
PSO170G1938 Papaver somniferum HOM05D003057 ORTHO05D003904 1.4e-21 106.7 108 48.1
Os06g0523701 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D003904 1.8e-21 106.3 99 49.5
PSO017G5767 Papaver somniferum HOM05D003057 ORTHO05D003904 1.8e-21 106.3 116 44.8
PSO761G0317 Papaver somniferum HOM05D003057 ORTHO05D003904 5.3e-21 104.8 115 48.7
PSO384G2001 Papaver somniferum HOM05D003057 ORTHO05D003904 7.6e-20 100.9 108 47.2
Ah.04g158790 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-19 100.1 107 46.7
Ah.07g196960 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-19 100.1 107 46.7
Ah.07g202550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-19 100.1 107 46.7
PSO832G3916 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-19 100.1 107 48.6
PSO063G0536 Papaver somniferum HOM05D003057 ORTHO05D003904 1.7e-19 99.8 107 48.6
PSO339G0160 Papaver somniferum HOM05D003057 ORTHO05D003904 1.7e-19 99.8 107 48.6
PSO761G0015 Papaver somniferum HOM05D003057 ORTHO05D003904 1.7e-19 99.8 107 48.6
Ah.13g069490 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.9e-19 99.0 107 45.8
PSO170G6344 Papaver somniferum HOM05D003057 ORTHO05D003904 2.9e-19 99.0 113 44.2
PSO357G0662 Papaver somniferum HOM05D003057 ORTHO05D003904 2.9e-19 99.0 107 48.6
PSO384G4427 Papaver somniferum HOM05D003057 ORTHO05D003904 2.9e-19 99.0 113 44.2
Ah.03g142690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.8e-19 98.6 103 46.6
PSO339G0276 Papaver somniferum HOM05D003057 ORTHO05D003904 6.5e-19 97.8 63 69.8
Ah.16g106200 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-18 96.7 108 44.4
PSO017G7296 Papaver somniferum HOM05D003057 ORTHO05D003904 1.9e-18 96.3 107 46.7
COL.COLO4_35241 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.2e-18 95.5 91 50.5
Ah.06g184390 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.1e-18 94.4 107 44.9
Ah.04g155590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-17 93.6 107 43.0
Ah.06g187260 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-17 93.6 98 46.9
Ah.01g017940 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-17 93.2 101 45.5
Ah.14g084280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-17 93.2 98 46.9
Ah.03g145610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.7e-17 92.4 98 46.9
TWI15G0994 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 2.7e-17 92.4 78 52.6
Ah.13g068770 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.5e-17 92.0 98 46.9
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 3.5e-17 92.0 108 47.2
Ah.15g097480 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.6e-17 91.7 98 46.9
Ah.01g023980 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.9e-17 90.9 103 44.7
Ah.07g201230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.9e-17 90.9 98 44.9
Ah.01g013430 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-16 90.1 107 43.9
Ah.10g026650 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-16 90.1 98 45.9
TPR.G34813 Trifolium pratense HOM05D003057 ORTHO05D003904 1.3e-16 90.1 100 49.0
Ah.04g164590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.0e-16 89.0 110 39.1
Ah.06g181920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.0e-16 89.0 110 39.1
Ah.11g045640 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.0e-16 89.0 110 39.1
TWI31G1500 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 3.0e-16 89.0 80 48.8
Ah.06g181680 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.9e-16 88.6 108 39.8
Ah.07g202070 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.1e-16 88.2 106 39.6
Ah.04g162690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.7e-16 87.8 108 38.9
Ah.03g140530 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-15 87.0 94 45.7
Ah.16g103350 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-15 87.0 110 38.2
Ah.13g067120 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.9e-15 86.3 108 38.9
Ah.11g041830 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.5e-15 85.9 108 38.9
Ah.06g182610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.3e-15 85.5 113 37.2
Ah.10g032920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.3e-15 85.1 105 39.0
Ah.11g046560 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.3e-15 85.1 105 39.0
Ah.05g175220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.7e-15 84.7 109 37.6
Ah.03g144340 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.4e-15 84.3 108 38.0
PSO384G0803 Papaver somniferum HOM05D003057 ORTHO05D003904 9.6e-15 84.0 91 44.0
COL.COLO4_37789 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.3e-14 81.3 62 54.8
COL.COLO4_31045 Corchorus olitorius HOM05D003057 ORTHO05D003904 8.2e-14 80.9 54 66.7
Ah.03g143550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.9e-13 77.8 110 35.5
Ah.10g032220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-12 77.0 108 34.3
Rhsim01G0125100 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.2e-12 77.0 75 50.7
QL05p017993 Quercus lobata HOM05D003057 ORTHO05D003904 4.5e-12 75.1 63 52.4
QL01p049124 Quercus lobata HOM05D003057 ORTHO05D003904 5.9e-12 74.7 78 44.9
PSO170G5731 Papaver somniferum HOM05D003057 ORTHO05D003904 7.6e-12 74.3 50 66.0
Ah.01g002160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.0e-11 73.9 113 32.7
TPR.G38366 Trifolium pratense HOM05D003057 ORTHO05D003904 1.0e-11 73.9 55 56.4
Ah.07g206230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.2e-11 72.8 113 31.9
Ah.07g201280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.9e-11 72.4 105 35.2
Ah.06g181160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.4e-11 70.9 108 32.4
TPR.G14789 Trifolium pratense HOM05D003057 ORTHO05D003904 2.5e-10 69.3 49 63.3
PSO478G2060 Papaver somniferum HOM05D003057 ORTHO05D003904 3.5e-09 65.5 52 53.8
AUR62022531 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.1e-09 64.7 99 35.4
PSO017G5295 Papaver somniferum HOM05D003057 ORTHO05D003904 7.9e-09 64.3 75 38.7
PSO017G3866 Papaver somniferum HOM05D003057 ORTHO05D003904 3.9e-08 62.0 50 52.0
COL.COLO4_22596 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.6e-06 56.6 55 49.1
Duzib205G1595 Durio zibethinus HOM05D003057 ORTHO05D003904 3.7e-06 55.5 70 42.9
PSO063G5105 Papaver somniferum HOM05D003057 ORTHO05D003904 8.2e-06 54.3 43 53.5


User provided reference genes

Program Settings