Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9011 Trifolium pratense HOM05D004894 ORTHO05D005689 5.0e-88 327.8 170 100.0
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 2.3e-56 222.6 164 70.1
Medtr6g038010 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-51 206.8 170 62.4
Psat1g100960 Pisum sativum HOM05D004894 ORTHO05D005689 2.2e-51 206.1 171 65.5
Glyma.16G164600 Glycine max HOM05D004894 ORTHO05D005689 2.7e-49 199.1 172 60.5
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 7.8e-49 197.6 175 60.6
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 1.0e-48 197.2 165 61.8
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 5.2e-45 184.9 175 61.1
Phvul.004G091800 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 7.5e-44 181.0 174 55.7
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 3.5e-41 172.2 171 55.6
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 3.5e-41 172.2 171 55.6
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 4.6e-41 171.8 172 54.7
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 6.6e-40 167.9 174 53.4
Lj5g0011961 Lotus japonicus HOM05D004894 ORTHO05D005689 3.6e-38 162.2 163 50.9
Lalb_Chr14g0362611 Lupinus albus HOM05D004894 ORTHO05D005689 4.0e-37 158.7 173 49.7
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 1.3e-35 153.7 169 51.5
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 6.4e-35 151.4 175 48.0
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 1.4e-34 150.2 173 47.4
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 1.4e-34 150.2 173 47.4
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 2.4e-34 149.4 174 48.3
VMungo0720G1196 Vigna mungo HOM05D004894 ORTHO05D005689 2.4e-34 149.4 174 49.4
Lalb_Chr02g0141491 Lupinus albus HOM05D004894 ORTHO05D005689 9.2e-34 147.5 172 48.8
Ca_10673_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 3.0e-32 142.5 173 48.0
Glyma.10G223100 Glycine max HOM05D004894 ORTHO05D005689 5.6e-31 138.3 140 51.4
Lalb_Chr03g0035581 Lupinus albus HOM05D004894 ORTHO05D005689 5.6e-31 138.3 173 48.0
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 2.8e-30 136.0 185 46.5
Glyma.10G140100 Glycine max HOM05D004894 ORTHO05D005689 2.3e-29 132.9 173 45.1
Phvul.008G271200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 2.3e-29 132.9 186 43.0
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 3.1e-29 132.5 173 47.4
Phvul.007G082200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 3.1e-29 132.5 177 46.9
VMungo0720G2185 Vigna mungo HOM05D004894 ORTHO05D005689 3.1e-29 132.5 150 48.0
VMungo0647G0768 Vigna mungo HOM05D004894 ORTHO05D005689 1.2e-28 130.6 186 42.5
Phvul.007G082100 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 4.4e-28 128.6 177 45.8
Lalb_Chr03g0035561 Lupinus albus HOM05D004894 ORTHO05D005689 7.6e-28 127.9 169 42.0
Glyma.10G223000 Glycine max HOM05D004894 ORTHO05D005689 2.9e-27 125.9 187 43.3
arahy.Tifrunner.gnm1.ann1.56TCJ2 Arachis hypogaea HOM05D004894 ORTHO05D005689 4.9e-27 125.2 175 44.0
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 8.4e-27 124.4 170 43.5
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 8.4e-27 124.4 178 42.7
arahy.Tifrunner.gnm1.ann1.P5DTJP Arachis hypogaea HOM05D004894 ORTHO05D005689 1.1e-26 124.0 133 46.6
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 1.4e-26 123.6 175 42.9
Medtr1g098410 Medicago truncatula HOM05D004894 ORTHO05D005689 3.2e-26 122.5 183 43.7
Psat6g191440 Pisum sativum HOM05D004894 ORTHO05D005689 4.1e-26 122.1 131 46.6
Lalb_Chr19g0130061 Lupinus albus HOM05D004894 ORTHO05D005689 9.2e-26 120.9 172 43.6
Lalb_Chr03g0035571 Lupinus albus HOM05D004894 ORTHO05D005689 1.2e-25 120.6 173 45.1
TPR.G12614 Trifolium pratense HOM05D004894 ORTHO05D005689 2.7e-25 119.4 167 42.5
Medtr1g098200 Medicago truncatula HOM05D004894 ORTHO05D005689 3.5e-25 119.0 181 42.0
Medtr1g098400 Medicago truncatula HOM05D004894 ORTHO05D005689 3.5e-25 119.0 181 42.0
TPR.G17037 Trifolium pratense HOM05D004894 ORTHO05D005689 1.5e-23 113.6 118 49.2
TPR.G12588 Trifolium pratense HOM05D000036 ORTHO05D005689 7.3e-23 111.3 161 39.8
QL02p037592 Quercus lobata HOM05D004894 ORTHO05D005689 1.6e-22 110.2 168 38.1
QL02p038562 Quercus lobata HOM05D004894 ORTHO05D005689 1.6e-22 110.2 168 38.1
TPR.G36461 Trifolium pratense HOM05D004894 ORTHO05D005689 8.1e-22 107.8 149 43.0
CiPaw.16G009500 Carya illinoinensis HOM05D004894 ORTHO05D005689 1.1e-21 107.5 166 36.7
Glyma.14G020600 Glycine max HOM05D004894 ORTHO05D005689 3.1e-21 105.9 148 40.5
Psat7g222800 Pisum sativum HOM05D004894 ORTHO05D005689 6.9e-21 104.8 102 51.0
Glyma.14G020900 Glycine max HOM05D004894 ORTHO05D005689 1.2e-20 104.0 148 40.5
Medtr4g065770 Medicago truncatula HOM05D004894 ORTHO05D005689 2.0e-20 103.2 168 40.5
QL02p038558 Quercus lobata HOM05D004894 ORTHO05D005689 2.0e-20 103.2 151 38.4
Haze_17792 Corylus avellana HOM05D004894 ORTHO05D005689 5.8e-20 101.7 164 37.8
Glyma.02G262600 Glycine max HOM05D004894 ORTHO05D005689 1.3e-19 100.5 173 38.7
Glyma.02G262800 Glycine max HOM05D004894 ORTHO05D005689 1.3e-19 100.5 173 38.7
Glyma.02G262900 Glycine max HOM05D004894 ORTHO05D005689 1.3e-19 100.5 173 38.7
Glyma.02G263000 Glycine max HOM05D004894 ORTHO05D005689 1.3e-19 100.5 173 38.7
QL02p037589 Quercus lobata HOM05D004894 ORTHO05D005689 1.3e-19 100.5 172 35.5
Glyma.02G263100 Glycine max HOM05D004894 ORTHO05D005689 2.2e-19 99.8 173 38.2
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 4.9e-19 98.6 167 33.5
Haze_17777 Corylus avellana HOM05D004894 ORTHO05D005689 6.4e-19 98.2 164 37.2
Psat4g130720 Pisum sativum HOM05D004894 ORTHO05D005689 6.4e-19 98.2 159 40.3
TPR.G14508 Trifolium pratense HOM05D004894 ORTHO05D005689 6.4e-19 98.2 178 36.5
Medtr1g098430 Medicago truncatula HOM05D004894 ORTHO05D005689 1.9e-18 96.7 182 37.4
MD10G1032700 Malus domestica HOM05D004894 ORTHO05D005689 2.4e-18 96.3 167 34.7
Medtr6g037920 Medicago truncatula HOM05D004894 ORTHO05D005689 2.4e-18 96.3 166 40.4
Lalb_Chr14g0362601 Lupinus albus HOM05D004894 ORTHO05D005689 3.2e-18 95.9 101 48.5
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 3.2e-18 95.9 168 32.7
Cfa018298 Carpinus fangiana HOM05D004894 ORTHO05D005689 4.2e-18 95.5 164 36.6
Glyma.02G262700 Glycine max HOM05D004894 ORTHO05D005689 5.4e-18 95.1 173 37.6
Psat6g191480 Pisum sativum HOM05D004894 ORTHO05D005689 7.1e-18 94.7 99 48.5
Lalb_Chr03g0035431 Lupinus albus HOM05D004894 ORTHO05D005689 9.3e-18 94.4 182 36.3
Psat6g191560 Pisum sativum HOM05D004894 ORTHO05D005689 1.2e-17 94.0 100 47.0
Psat1g101000 Pisum sativum HOM05D004894 ORTHO05D005689 7.8e-17 91.3 171 34.5
TPR.G36348 Trifolium pratense HOM05D004894 ORTHO05D005689 1.3e-16 90.5 176 35.2
Lalb_Chr03g0035421 Lupinus albus HOM05D004894 ORTHO05D005689 2.3e-16 89.7 182 36.3
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 3.0e-16 89.4 169 34.3
Psat3g039600 Pisum sativum HOM05D004894 ORTHO05D005689 3.9e-16 89.0 168 35.1
TPR.G36349 Trifolium pratense HOM05D004894 ORTHO05D005689 3.9e-16 89.0 167 35.3
TPR.G21506 Trifolium pratense HOM05D004894 ORTHO05D005689 5.1e-16 88.6 184 33.7
TPR.G36147 Trifolium pratense HOM05D004894 ORTHO05D005689 5.1e-16 88.6 185 34.6
Psat0s6062g0040 Pisum sativum HOM05D004894 ORTHO05D005689 1.1e-15 87.4 164 33.5
MD10G1032400 Malus domestica HOM05D004894 ORTHO05D005689 1.5e-15 87.0 128 34.4
TPR.G22347 Trifolium pratense HOM05D004894 ORTHO05D005689 1.9e-15 86.7 179 36.3
TPR.G28007 Trifolium pratense HOM05D004894 ORTHO05D005689 9.6e-15 84.3 161 33.5
Sabra13G0011900 Salix brachista HOM05D004894 ORTHO05D009560 1.3e-14 84.0 174 31.6
TPR.G30777 Trifolium pratense HOM05D004894 ORTHO05D005689 1.6e-14 83.6 165 35.8
CiPaw.15G014000 Carya illinoinensis HOM05D004894 ORTHO05D005689 2.1e-14 83.2 151 36.4
Ca_26810_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 3.6e-14 82.4 104 43.3
Ciclev10003770m.g Citrus clementina HOM05D004894 ORTHO05D005689 3.6e-14 82.4 151 32.5
Medtr6g037780 Medicago truncatula HOM05D004894 ORTHO05D005689 4.8e-14 82.0 175 35.4
Haze_17791 Corylus avellana HOM05D004894 ORTHO05D009560 3.1e-13 79.3 150 33.3
Cfa018299 Carpinus fangiana HOM05D004894 ORTHO05D005689 9.0e-13 77.8 131 35.1
TPR.G4408 Trifolium pratense HOM05D004894 ORTHO05D005689 9.0e-13 77.8 169 29.6
Lalb_Chr03g0035441 Lupinus albus HOM05D004894 ORTHO05D005689 2.6e-12 76.3 130 36.9
Ciclev10003123m.g Citrus clementina HOM05D004894 ORTHO05D005689 4.5e-12 75.5 151 34.4
RcHm_v2.0_Chr6g0274541 Rosa chinensis HOM05D004894 ORTHO05D009560 4.5e-12 75.5 167 32.3
Lalb_Chr15g0089571 Lupinus albus HOM05D004894 ORTHO05D005689 7.6e-12 74.7 185 34.6
Migut.C00970 Erythranthe guttata HOM05D011489 ORTHO05D005689 9.9e-12 74.3 181 32.6
FAN24G0571 Fragaria x ananassa HOM05D004894 ORTHO05D005689 9.9e-12 74.3 133 34.6
FAN24G3270 Fragaria x ananassa HOM05D004894 ORTHO05D005689 2.2e-11 73.2 150 33.3
FvH4_2g13220 Fragaria vesca HOM05D004894 ORTHO05D005689 4.9e-11 72.0 150 32.7
FAN27G2788 Fragaria x ananassa HOM05D004894 ORTHO05D009560 6.4e-11 71.6 133 33.1
Medtr6g037820 Medicago truncatula HOM05D004894 ORTHO05D005689 8.4e-11 71.2 175 33.1
Cfa018297 Carpinus fangiana HOM05D004894 ORTHO05D005689 1.4e-10 70.5 117 37.6
SGA_v2.0_scaffold108G30878 Striga asiatica HOM05D011489 ORTHO05D014472 4.2e-10 68.9 177 32.8
SHI09078 Sapria himalayana HOM05D004894 ORTHO05D005689 1.2e-09 67.4 156 28.8
Medtr6g037880 Medicago truncatula HOM05D004894 ORTHO05D005689 1.6e-09 67.0 173 34.7
TPR.G14498 Trifolium pratense HOM05D004894 ORTHO05D005689 3.5e-09 65.9 174 32.2
Peaxi162Scf00079g00202 Petunia axillaris HOM05D011489 ORTHO05D014472 1.3e-08 63.9 169 29.0
Duzib041G0061 Durio zibethinus HOM05D007679 ORTHO05D009560 1.8e-08 63.5 149 30.9
CSS0042410 Camellia sinensis var. sinensis HOM05D007679 ORTHO05D009560 3.9e-08 62.4 142 33.1
Thecc.08G156900 Theobroma cacao HOM05D007679 ORTHO05D009560 8.7e-08 61.2 125 32.0
MSTRG.1100 Avicennia marina HOM05D011489 ORTHO05D014472 2.5e-07 59.7 154 31.8
Gorai.009G255700 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.5e-07 59.7 153 28.1
Gorai.009G255800 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.5e-07 59.7 150 29.3
Nitab4.5_0023902g0010 Nicotiana tabacum HOM05D011489 ORTHO05D014472 7.4e-07 58.2 177 27.7
Migut.C00972 Erythranthe guttata HOM05D011489 ORTHO05D005689 9.6e-07 57.8 163 28.8
Gohir.A05G245372 Gossypium hirsutum HOM05D007679 ORTHO05D009560 9.6e-07 57.8 148 29.7
Medtr3g060470 Medicago truncatula HOM05D004894 ORTHO05D005689 9.6e-07 57.8 157 28.7
Medtr3g060520 Medicago truncatula HOM05D004894 ORTHO05D005689 9.6e-07 57.8 157 28.7
Medtr3g060570 Medicago truncatula HOM05D004894 ORTHO05D005689 9.6e-07 57.8 157 28.7
COL.COLO4_34260 Corchorus olitorius HOM05D007679 ORTHO05D009560 2.1e-06 56.6 130 30.8
Oeu061438.1 Olea europaea HOM05D011489 ORTHO05D014472 2.1e-06 56.6 174 27.6
Potri.013G013300 Populus trichocarpa HOM05D004894 ORTHO05D005689 2.8e-06 56.2 66 47.0
Gohir.A05G245054 Gossypium hirsutum HOM05D007679 ORTHO05D009560 4.8e-06 55.5 147 29.3


User provided reference genes

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