Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8997 Trifolium pratense HOM05D000292 ORTHO05D000172 2.8e-73 278.5 136 100.0
Ca_07039_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 6.0e-28 127.9 124 53.2
Medtr7g063880 Medicago truncatula HOM05D000292 ORTHO05D000172 2.8e-25 119.0 125 50.4
Ca_05441_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 1.4e-24 116.7 125 46.4
Medtr7g062280 Medicago truncatula HOM05D000292 ORTHO05D000172 4.1e-24 115.2 139 43.9
TPR.G31737 Trifolium pratense HOM05D000292 ORTHO05D000172 5.3e-24 114.8 123 46.3
TPR.G9015 Trifolium pratense HOM05D000292 ORTHO05D000172 1.5e-23 113.2 127 46.5
TPR.G29509 Trifolium pratense HOM05D000292 ORTHO05D000172 2.6e-23 112.5 127 47.2
Medtr7g063660 Medicago truncatula HOM05D000292 ORTHO05D000172 3.4e-23 112.1 123 44.7
TPR.G9003 Trifolium pratense HOM05D000292 ORTHO05D000172 1.3e-22 110.2 128 50.0
TPR.G16333 Trifolium pratense HOM05D000292 ORTHO05D000172 1.7e-22 109.8 127 45.7
Medtr7g063840 Medicago truncatula HOM05D000292 ORTHO05D000172 8.5e-22 107.5 124 45.2
TPR.G35785 Trifolium pratense HOM05D000292 ORTHO05D000172 1.9e-21 106.3 127 43.3
Medtr7g062300 Medicago truncatula HOM05D000292 ORTHO05D000172 2.5e-21 105.9 127 44.9
Phvul.008G114800 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 2.5e-21 105.9 125 43.2
VMungo1383G2273 Vigna mungo HOM05D000292 ORTHO05D000172 3.2e-21 105.5 125 44.0
TPR.G9007 Trifolium pratense HOM05D000292 ORTHO05D000172 4.2e-21 105.1 129 48.1
Medtr3g065200 Medicago truncatula HOM05D000292 ORTHO05D000172 1.6e-20 103.2 127 41.7
Glyma.07G137500 Glycine max HOM05D000292 ORTHO05D000172 2.7e-20 102.4 124 43.5
Psat3g135600 Pisum sativum HOM05D000292 ORTHO05D000172 2.7e-20 102.4 121 43.8
TPR.G16319 Trifolium pratense HOM05D000292 ORTHO05D000172 4.6e-20 101.7 124 41.9
Medtr7g063830 Medicago truncatula HOM05D000292 ORTHO05D000172 6.1e-20 101.3 127 47.2
Medtr7g063900 Medicago truncatula HOM05D000292 ORTHO05D000172 6.1e-20 101.3 126 44.4
Medtr3g007740 Medicago truncatula HOM05D000292 ORTHO05D000172 1.4e-19 100.1 119 47.1
Psat4g099720 Pisum sativum HOM05D000292 ORTHO05D000172 1.4e-19 100.1 124 45.2
Psat5g041040 Pisum sativum HOM05D000292 ORTHO05D000172 1.4e-19 100.1 124 45.2
Lalb_Chr03g0042921 Lupinus albus HOM05D000292 ORTHO05D000172 6.7e-19 97.8 137 37.2
Glyma.18G293900 Glycine max HOM05D000292 ORTHO05D000172 8.8e-19 97.4 129 41.9
Medtr7g063890 Medicago truncatula HOM05D000292 ORTHO05D000172 2.5e-18 95.9 125 46.4
VMungo1383G1253 Vigna mungo HOM05D000292 ORTHO05D000172 2.5e-18 95.9 128 37.5
Phvul.008G110000 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 3.3e-18 95.5 126 38.9
Psat3g135560 Pisum sativum HOM05D000292 ORTHO05D000172 1.3e-17 93.6 125 40.8
Medtr7g063670 Medicago truncatula HOM05D000292 ORTHO05D000172 1.7e-17 93.2 124 41.1
Medtr7g063820 Medicago truncatula HOM05D000292 ORTHO05D000172 1.7e-17 93.2 135 43.0
VMungo0331G0650 Vigna mungo HOM05D000292 ORTHO05D000172 1.7e-17 93.2 127 37.0
TPR.G16339 Trifolium pratense HOM05D000292 ORTHO05D000172 2.8e-17 92.4 125 40.0
Phvul.008G110100 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 4.8e-17 91.7 128 38.3
Glyma.07G137801 Glycine max HOM05D000292 ORTHO05D000172 1.4e-16 90.1 123 39.0
Medtr7g063870 Medicago truncatula HOM05D000292 ORTHO05D000172 1.8e-16 89.7 70 60.0
LjContig00312_ERROPOS870357g0020002 Lotus japonicus HOM05D000292 ORTHO05D000172 2.4e-16 89.4 122 41.8
Phvul.008G110200 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 1.2e-15 87.0 128 35.9
Glyma.18G194800 Glycine max HOM05D000292 ORTHO05D000172 1.5e-15 86.7 127 37.8
Phvul.008G110500 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 2.6e-15 85.9 118 42.4
Psat3g133240 Pisum sativum HOM05D000292 ORTHO05D000172 1.0e-14 84.0 125 40.0
Glyma.18G194200 Glycine max HOM05D000292 ORTHO05D000172 1.3e-14 83.6 131 32.1
Medtr7g062270 Medicago truncatula HOM05D000292 ORTHO05D000172 1.7e-14 83.2 132 39.4
Phvul.008G110700 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 2.2e-14 82.8 128 37.5
VMungo0720G0457 Vigna mungo HOM05D000292 ORTHO05D000172 2.9e-14 82.4 116 38.8
Glyma.07G143401 Glycine max HOM05D000292 ORTHO05D000172 3.8e-14 82.0 125 33.6
Phvul.008G110600 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 3.8e-14 82.0 123 36.6
Phvul.008G115000 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 5.0e-14 81.6 132 35.6
Glyma.18G194700 Glycine max HOM05D000292 ORTHO05D000172 6.5e-14 81.3 128 35.9
Glyma.18G195000 Glycine max HOM05D000292 ORTHO05D000172 8.5e-14 80.9 128 37.5
TPR.G16347 Trifolium pratense HOM05D000292 ORTHO05D000172 1.1e-13 80.5 168 35.1
Glyma.18G194600 Glycine max HOM05D000292 ORTHO05D000172 1.4e-13 80.1 126 35.7
VMungo0647G0748 Vigna mungo HOM05D000292 ORTHO05D000172 1.4e-13 80.1 128 35.9
Ca_07038_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 7.2e-13 77.8 99 48.5
Phvul.008G110800 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 9.4e-13 77.4 92 42.4
Psat3g147880 Pisum sativum HOM05D000292 ORTHO05D000172 3.6e-12 75.5 134 35.1
TPR.G34868 Trifolium pratense HOM05D000292 ORTHO05D000172 3.6e-12 75.5 131 34.4
TPR.G34864 Trifolium pratense HOM05D000292 ORTHO05D000172 4.7e-12 75.1 129 35.7
TPR.G35161 Trifolium pratense HOM05D000292 ORTHO05D000172 4.7e-12 75.1 127 35.4
Medtr7g063920 Medicago truncatula HOM05D000292 ORTHO05D000172 6.1e-12 74.7 122 34.4
TPR.G34869 Trifolium pratense HOM05D000292 ORTHO05D000172 7.9e-12 74.3 124 37.1
TPR.G1548 Trifolium pratense HOM05D000292 ORTHO05D000172 1.8e-11 73.2 131 33.6
Lalb_Chr03g0042911 Lupinus albus HOM05D000292 ORTHO05D000172 5.1e-11 71.6 130 34.6
Medtr7g066260 Medicago truncatula HOM05D000292 ORTHO05D000172 5.1e-11 71.6 136 33.8
Psat3g135120 Pisum sativum HOM05D000292 ORTHO05D000172 5.1e-11 71.6 132 31.8
TPR.G18528 Trifolium pratense HOM05D000292 ORTHO05D000172 5.1e-11 71.6 127 33.1
Medtr7g066410 Medicago truncatula HOM05D000292 ORTHO05D000172 1.1e-10 70.5 130 33.1
Medtr7g058700 Medicago truncatula HOM05D000834 ORTHO05D000909 1.5e-10 70.1 149 32.9
Lj1g0012967 Lotus japonicus HOM05D000292 ORTHO05D000172 2.0e-10 69.7 134 30.6
CSS0027918 Camellia sinensis var. sinensis HOM05D000292 ORTHO05D000172 5.7e-10 68.2 136 33.8
Medtr7g066570 Medicago truncatula HOM05D000292 ORTHO05D000172 5.7e-10 68.2 119 37.0
CSS0014923 Camellia sinensis var. sinensis HOM05D000292 ORTHO05D000172 1.3e-09 67.0 132 30.3
Medtr7g066400 Medicago truncatula HOM05D000292 ORTHO05D000172 1.3e-09 67.0 117 31.6
Medtr7g058710 Medicago truncatula HOM05D000292 ORTHO05D000172 1.7e-09 66.6 137 31.4
Phvul.008G114900 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 1.7e-09 66.6 88 38.6
Psat3g131640 Pisum sativum HOM05D000292 ORTHO05D000172 2.2e-09 66.2 125 36.0
TPR.G11727 Trifolium pratense HOM05D000292 ORTHO05D000172 2.2e-09 66.2 127 35.4
Medtr7g066480 Medicago truncatula HOM05D000292 ORTHO05D000172 3.7e-09 65.5 131 31.3
TPR.G16318 Trifolium pratense HOM05D000292 ORTHO05D000172 3.7e-09 65.5 76 50.0
TAR636G1535 Trochodendron aralioides HOM05D000292 ORTHO05D000172 3.7e-09 65.5 131 32.8
Migut.C00012 Erythranthe guttata HOM05D000292 ORTHO05D000172 8.2e-09 64.3 111 34.2
Medtr7g063690 Medicago truncatula HOM05D000292 ORTHO05D000172 1.1e-08 63.9 92 33.7
Medtr7g066340 Medicago truncatula HOM05D000292 ORTHO05D000172 1.1e-08 63.9 138 30.4
TPR.G34863 Trifolium pratense HOM05D000292 ORTHO05D000172 1.1e-08 63.9 130 30.8
TAR636G0285 Trochodendron aralioides HOM05D000292 ORTHO05D000172 1.1e-08 63.9 124 36.3
TAR636G2800 Trochodendron aralioides HOM05D000292 ORTHO05D000172 1.1e-08 63.9 124 36.3
Lalb_Chr03g0042891 Lupinus albus HOM05D000292 ORTHO05D000172 1.4e-08 63.5 130 32.3
Psat7g242440 Pisum sativum HOM05D000292 ORTHO05D000172 1.4e-08 63.5 133 33.1
CSS0007252 Camellia sinensis var. sinensis HOM05D000292 ORTHO05D000172 2.4e-08 62.8 136 32.4
CARHR107050 Cardamine hirsuta HOM05D000292 ORTHO05D000172 3.1e-08 62.4 126 32.5
Migut.M00470 Erythranthe guttata HOM05D000292 ORTHO05D000172 3.1e-08 62.4 129 32.6
Medtr7g066360 Medicago truncatula HOM05D000292 ORTHO05D000172 3.1e-08 62.4 129 32.6
TAR636G3107 Trochodendron aralioides HOM05D000292 ORTHO05D000172 3.1e-08 62.4 93 36.6
VMungo0464G0059 Vigna mungo HOM05D000292 ORTHO05D000172 3.1e-08 62.4 109 34.9
Carub.0003s0828 Capsella rubella HOM05D000292 ORTHO05D000172 5.3e-08 61.6 131 29.8
TPR.G34876 Trifolium pratense HOM05D000292 ORTHO05D000172 5.3e-08 61.6 95 34.7
TAR629G0505 Trochodendron aralioides HOM05D000292 ORTHO05D000172 5.3e-08 61.6 125 36.0
Medtr7g066430 Medicago truncatula HOM05D000292 ORTHO05D000172 7.0e-08 61.2 130 31.5
Psat7g242240 Pisum sativum HOM05D000292 ORTHO05D000172 7.0e-08 61.2 127 29.1
TAR636G1917 Trochodendron aralioides HOM05D000292 ORTHO05D000172 7.0e-08 61.2 126 33.3
TAR636G3432 Trochodendron aralioides HOM05D000292 ORTHO05D000172 7.0e-08 61.2 126 33.3
HanXRQChr03g0074651 Helianthus annuus HOM05D000292 ORTHO05D000172 1.2e-07 60.5 99 37.4
HanXRQChr03g0074661 Helianthus annuus HOM05D000292 ORTHO05D000172 1.2e-07 60.5 132 30.3
HanXRQChr13g0420841 Helianthus annuus HOM05D000292 ORTHO05D000172 1.2e-07 60.5 132 30.3
Ca_20095_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 1.5e-07 60.1 132 30.3
Ca_09161_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 2.0e-07 59.7 130 33.1
Migut.M00458 Erythranthe guttata HOM05D000292 ORTHO05D000172 2.0e-07 59.7 136 27.9
Medtr1g014060 Medicago truncatula HOM05D000292 ORTHO05D000172 2.0e-07 59.7 129 34.9
Medtr7g012680 Medicago truncatula HOM05D000292 ORTHO05D000172 2.6e-07 59.3 142 29.6
TAR636G1912 Trochodendron aralioides HOM05D000292 ORTHO05D000172 2.6e-07 59.3 131 30.5
Medtr7g066350 Medicago truncatula HOM05D000292 ORTHO05D000172 3.4e-07 58.9 133 27.1
ECA240G4293 Erigeron canadensis HOM05D000292 ORTHO05D000172 4.5e-07 58.5 133 30.8
TPR.G34867 Trifolium pratense HOM05D000292 ORTHO05D000172 4.5e-07 58.5 124 29.8
Migut.M00444 Erythranthe guttata HOM05D000292 ORTHO05D000172 5.9e-07 58.2 107 32.7
HanXRQChr09g0241171 Helianthus annuus HOM05D000292 ORTHO05D000172 5.9e-07 58.2 140 27.9
AT3G09120 Arabidopsis thaliana HOM05D000292 ORTHO05D000172 7.7e-07 57.8 133 31.6
CARHR107060 Cardamine hirsuta HOM05D000292 ORTHO05D000172 7.7e-07 57.8 142 28.9
TPR.G18390 Trifolium pratense HOM05D000292 ORTHO05D000172 7.7e-07 57.8 134 29.9
Migut.M00211 Erythranthe guttata HOM05D000292 ORTHO05D000172 1.0e-06 57.4 117 35.9
Migut.M00466 Erythranthe guttata HOM05D000292 ORTHO05D000172 1.0e-06 57.4 139 30.2
TPR.G34879 Trifolium pratense HOM05D000292 ORTHO05D000172 1.0e-06 57.4 127 29.9
Migut.M00462 Erythranthe guttata HOM05D000292 ORTHO05D000172 1.3e-06 57.0 121 35.5
HanXRQChr09g0241181 Helianthus annuus HOM05D000292 ORTHO05D000172 1.3e-06 57.0 132 28.8
Medtr7g066280 Medicago truncatula HOM05D000292 ORTHO05D000172 1.3e-06 57.0 133 31.6
TPR.G1599 Trifolium pratense HOM05D000292 ORTHO05D000172 1.3e-06 57.0 93 39.8
TAR636G2411 Trochodendron aralioides HOM05D000292 ORTHO05D000172 1.3e-06 57.0 120 32.5
TPR.G1577 Trifolium pratense HOM05D000292 ORTHO05D000172 1.7e-06 56.6 125 27.2
CARHR107070 Cardamine hirsuta HOM05D000292 ORTHO05D000172 2.2e-06 56.2 135 26.7
Thhalv10009971m.g Eutrema salsugineum HOM05D000292 ORTHO05D000172 2.2e-06 56.2 91 38.5
Medtr4g019310 Medicago truncatula HOM05D000292 ORTHO05D000172 2.2e-06 56.2 133 30.8
AL3G20200 Arabidopsis lyrata HOM05D000292 ORTHO05D000172 2.9e-06 55.8 134 29.1
Rhsim11G0123100 Rhododendron simsii HOM05D000292 ORTHO05D000172 2.9e-06 55.8 134 27.6
RcHm_v2.0_Chr5g0067751 Rosa chinensis HOM05D000292 ORTHO05D000172 2.9e-06 55.8 138 26.8
TPR.G2275 Trifolium pratense HOM05D000292 ORTHO05D000172 2.9e-06 55.8 132 30.3
BcaC05g29642 Brassica carinata HOM05D000292 ORTHO05D000172 3.8e-06 55.5 126 27.8
C05p58810 Brassica napus HOM05D000292 ORTHO05D000172 3.8e-06 55.5 126 27.8
Carub.0006s0075 Capsella rubella HOM05D000292 ORTHO05D000172 3.8e-06 55.5 133 30.1
CARHR107090 Cardamine hirsuta HOM05D000292 ORTHO05D000172 3.8e-06 55.5 132 29.5
DCAR_018737 Daucus carota HOM05D000292 ORTHO05D000172 3.8e-06 55.5 128 27.3
Peaxi162Scf00141g00030 Petunia axillaris HOM05D000292 ORTHO05D000172 3.8e-06 55.5 129 28.7
Peaxi162Scf01352g00021 Petunia axillaris HOM05D000292 ORTHO05D000172 3.8e-06 55.5 129 28.7
TAR636G2636 Trochodendron aralioides HOM05D000292 ORTHO05D000172 3.8e-06 55.5 125 33.6
TAR636G3084 Trochodendron aralioides HOM05D000292 ORTHO05D000172 3.8e-06 55.5 136 30.9
AT3G09110 Arabidopsis thaliana HOM05D000292 ORTHO05D000172 5.0e-06 55.1 123 29.3
Phvul.008G110400 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 5.0e-06 55.1 113 32.7
Prupe.6G063900 Prunus persica HOM05D000292 ORTHO05D000172 5.0e-06 55.1 136 28.7
SEGI_17194 Sequoiadendron giganteum HOM05D000292 ORTHO05D000172 5.0e-06 55.1 129 31.8
Thecc.09G308900 Theobroma cacao HOM05D000292 ORTHO05D000172 5.0e-06 55.1 143 27.3
TPR.G18530 Trifolium pratense HOM05D000292 ORTHO05D000172 5.0e-06 55.1 117 32.5
Ca_09163_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 6.5e-06 54.7 127 31.5
Ca_20099_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 6.5e-06 54.7 142 26.1
Dinv14485 Davidia involucrata HOM05D000292 ORTHO05D000172 6.5e-06 54.7 131 27.5
Psat3g135400 Pisum sativum HOM05D000292 ORTHO05D000172 6.5e-06 54.7 130 29.2
Rhsim11G0123400 Rhododendron simsii HOM05D000292 ORTHO05D000172 6.5e-06 54.7 136 28.7
TPR.G1549 Trifolium pratense HOM05D000292 ORTHO05D000172 6.5e-06 54.7 131 29.0
Aqoxy1G00747 Aquilegia oxysepala HOM05D000292 ORTHO05D000172 8.5e-06 54.3 96 40.6
SGA_v2.0_scaffold34G13849 Striga asiatica HOM05D000292 ORTHO05D000172 8.5e-06 54.3 125 27.2


User provided reference genes

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