Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8981 Trifolium pratense HOM05D008997 ORTHO05D011051 6.5e-97 357.5 187 100.0
Psat2g145480 Pisum sativum HOM05D008997 ORTHO05D011051 1.9e-48 196.4 136 76.5
Medtr5g025520 Medicago truncatula HOM05D008997 ORTHO05D011051 2.1e-47 193.0 133 76.7
Ca_25045_v3 Cicer arietinum L. HOM05D008997 ORTHO05D011051 2.7e-47 192.6 137 73.7
Lalb_Chr09g0324991 Lupinus albus HOM05D008997 ORTHO05D011051 1.1e-43 180.6 135 68.9
Lalb_Chr05g0215081 Lupinus albus HOM05D008997 ORTHO05D011051 1.4e-43 180.3 135 68.9
Phvul.002G121500 Phaseolus vulgaris HOM05D008997 ORTHO05D011051 4.5e-42 175.3 135 65.2
Phvul.004G038900 Phaseolus vulgaris HOM05D008997 ORTHO05D011051 1.7e-41 173.3 133 64.7
VMungo0464G1626 Vigna mungo HOM05D008997 ORTHO05D011051 2.3e-41 172.9 129 67.4
Lj2g0013331 Lotus japonicus HOM05D008997 ORTHO05D011051 8.6e-41 171.0 126 69.0
Glyma.11G090500 Glycine max HOM05D008997 ORTHO05D011051 4.7e-39 165.2 129 64.3
arahy.Tifrunner.gnm1.ann1.G1G4QR Arachis hypogaea HOM05D008997 ORTHO05D011051 1.5e-29 133.7 159 49.7
arahy.Tifrunner.gnm1.ann1.QSM4Y5 Arachis hypogaea HOM05D008997 ORTHO05D011051 1.5e-29 133.7 159 49.7
VMungo1215G3078 Vigna mungo HOM05D008997 ORTHO05D011051 1.9e-19 100.1 133 45.1
Prupe.1G353500 Prunus persica HOM05D008997 ORTHO05D011051 1.6e-18 97.1 137 40.9
CiPaw.11G075100 Carya illinoinensis HOM05D008997 ORTHO05D011051 6.6e-17 91.7 133 39.1
MD08G1001500 Malus domestica HOM05D008997 ORTHO05D011051 3.3e-16 89.4 134 41.0
MD15G1000800 Malus domestica HOM05D008997 ORTHO05D011051 7.3e-16 88.2 134 41.0
Sed0009134 Sechium edule HOM05D008997 ORTHO05D011051 1.2e-15 87.4 81 46.9
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.6e-15 87.0 101 45.5
RcHm_v2.0_Chr6g0304331 Rosa chinensis HOM05D008997 ORTHO05D011051 1.6e-15 87.0 120 43.3
QL12p004181 Quercus lobata HOM05D008997 ORTHO05D011051 2.1e-15 86.7 137 38.7
FvH4_2g37377 Fragaria vesca HOM05D008997 ORTHO05D011051 2.8e-15 86.3 101 44.6
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 4.7e-15 85.5 132 40.2
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 6.2e-15 85.1 96 46.9
FAN21G1189 Fragaria x ananassa HOM05D008997 ORTHO05D011051 1.4e-14 84.0 101 43.6
FAN21G1803 Fragaria x ananassa HOM05D008997 ORTHO05D011051 1.4e-14 84.0 101 43.6
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.4e-14 84.0 84 47.6
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.8e-14 83.6 101 43.6
FAN21G1848 Fragaria x ananassa HOM05D008997 ORTHO05D011051 3.7e-12 75.9 116 38.8
PGR031G0389 Punica granatum HOM05D008997 ORTHO05D011051 3.7e-12 75.9 84 41.7
FAN27G1108 Fragaria x ananassa HOM05D008997 ORTHO05D011051 2.4e-11 73.2 116 37.9
Ciclev10013116m.g Citrus clementina HOM05D008997 ORTHO05D011051 3.2e-11 72.8 70 45.7
Eucgr.D02561 Eucalyptus grandis HOM05D008997 ORTHO05D011051 9.2e-11 71.2 85 41.2
Atru.chr8.2628 Acer truncatum HOM05D008997 ORTHO05D011051 4.6e-10 68.9 104 38.5
COL.COLO4_11281 Corchorus olitorius HOM05D008997 ORTHO05D011051 3.9e-09 65.9 115 32.2
Thecc.03G319000 Theobroma cacao HOM05D008997 ORTHO05D011051 1.5e-08 63.9 80 36.2
Sabra05G0064400 Salix brachista HOM05D008997 ORTHO05D011051 2.5e-08 63.2 109 31.2
Manes.10G091000 Manihot esculenta HOM05D008997 ORTHO05D011051 9.6e-08 61.2 71 38.0
Ca_25044_v3 Cicer arietinum L. HOM05D000827 ORTHO05D001318 3.6e-07 59.3 98 32.7
Potri.005G078400 Populus trichocarpa HOM05D008997 ORTHO05D011051 3.6e-07 59.3 109 29.4
SGA_v2.0_scaffold98G29374 Striga asiatica HOM05D000827 ORTHO05D001318 8.1e-07 58.2 77 35.1
THA.LOC104798526 Tarenaya hassleriana HOM05D013199 ORTHO05D015353 1.1e-06 57.8 66 34.8
Glyma.01G154200 Glycine max HOM05D000827 ORTHO05D001318 1.4e-06 57.4 127 27.6
Glyma.11G090400 Glycine max HOM05D000827 ORTHO05D001318 1.8e-06 57.0 77 35.1
Potri.009G092200 Populus trichocarpa HOM05D000827 ORTHO05D001318 2.4e-06 56.6 77 33.8
Sabra09G0070900 Salix brachista HOM05D000827 ORTHO05D001318 3.1e-06 56.2 77 33.8
Lj2g0023362 Lotus japonicus HOM05D000827 ORTHO05D001318 5.2e-06 55.5 81 33.3
Sabra16G0186400 Salix brachista HOM05D000827 ORTHO05D001318 6.8e-06 55.1 74 33.8


User provided reference genes

Program Settings