Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 2.5e-47 191.8 100 100.0
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 3.4e-44 181.4 99 93.9
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.4e-42 176.0 99 90.9
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.4e-42 176.0 99 90.9
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 3.2e-42 174.9 99 89.9
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 1.2e-38 162.9 94 86.2
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 2.0e-36 155.6 99 81.8
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 7.6e-36 153.7 98 76.5
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 1.3e-35 152.9 98 79.6
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 2.9e-35 151.8 99 75.8
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 6.4e-35 150.6 91 84.6
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 4.2e-34 147.9 98 73.5
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 7.1e-34 147.1 99 76.8
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 1.6e-33 146.0 98 73.5
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 3.5e-33 144.8 98 71.4
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 1.0e-32 143.3 99 73.7
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 1.0e-32 143.3 98 71.4
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 1.3e-32 142.9 98 73.5
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 1.3e-32 142.9 98 73.5
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 3.0e-32 141.7 98 69.4
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 3.0e-32 141.7 98 73.5
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 3.9e-32 141.4 98 73.5
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 1.5e-31 139.4 98 72.4
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 1.5e-31 139.4 98 72.4
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 2.5e-31 138.7 98 71.4
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 3.3e-31 138.3 96 71.9
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 3.3e-31 138.3 98 71.4
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 4.3e-31 137.9 98 72.4
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 4.3e-31 137.9 95 71.6
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 5.6e-31 137.5 98 70.4
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 7.3e-31 137.1 98 70.4
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 9.6e-31 136.7 98 69.4
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 9.6e-31 136.7 96 71.9
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 9.6e-31 136.7 99 70.7
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 9.6e-31 136.7 98 70.4
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 1.6e-30 136.0 98 66.3
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 1.6e-30 136.0 98 70.4
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 2.1e-30 135.6 98 69.4
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 2.1e-30 135.6 107 68.2
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 2.1e-30 135.6 99 68.7
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 2.8e-30 135.2 98 66.3
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 6.2e-30 134.0 96 69.8
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.1e-29 133.3 98 68.4
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 1.4e-29 132.9 98 68.4
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 1.4e-29 132.9 96 68.8
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 4.0e-29 131.3 98 67.3
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 4.0e-29 131.3 96 69.8
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 2.0e-28 129.0 96 68.8
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 2.0e-28 129.0 98 66.3
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 2.0e-28 129.0 90 70.0
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 2.6e-28 128.6 96 64.6
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 3.4e-28 128.3 114 61.4
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 3.4e-28 128.3 98 65.3
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 4.4e-28 127.9 98 65.3
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 2.2e-27 125.6 96 63.5
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 2.9e-27 125.2 93 65.6
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 8.4e-27 123.6 96 61.5
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 4.2e-26 121.3 98 61.2
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 3.5e-25 118.2 111 57.7
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 1.3e-24 116.3 98 63.3
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 1.7e-24 115.9 98 58.2
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 8.7e-24 113.6 98 58.2
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 1.9e-23 112.5 85 62.4
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 2.5e-23 112.1 95 58.9
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 5.6e-23 110.9 95 55.8
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 1.6e-22 109.4 98 56.1
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 1.4e-21 106.3 117 56.4
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 6.9e-21 104.0 83 60.2
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 2.0e-20 102.4 90 60.0
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 2.3e-16 89.0 62 66.1
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 4.3e-15 84.7 88 47.7
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 1.3e-14 83.2 96 42.7
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 3.7e-14 81.6 58 72.4
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 8.1e-14 80.5 98 46.9
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 1.8e-13 79.3 53 67.9
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 3.1e-13 78.6 47 80.9
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 1.2e-12 76.6 88 38.6
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 3.4e-12 75.1 45 75.6
TPR.G4281 Trifolium pratense HOM05D007678 ORTHO05D009658 1.7e-11 72.8 37 100.0
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 6.5e-11 70.9 94 34.0


User provided reference genes

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