Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8947 Trifolium pratense HOM05D005191 ORTHO05D006725 7.9e-61 236.9 116 100.0
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 3.2e-54 214.9 116 92.2
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 7.9e-53 210.3 117 88.9
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 2.2e-50 202.2 116 87.1
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 3.8e-47 191.4 114 81.6
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 3.8e-47 191.4 114 81.6
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 8.5e-47 190.3 114 81.6
Psat6g224720 Pisum sativum HOM05D005191 ORTHO05D006725 5.5e-46 187.6 116 79.3
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 2.7e-45 185.3 99 88.9
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 1.0e-44 183.3 99 88.9
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 1.5e-43 179.5 107 80.4
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 2.8e-42 175.3 116 75.9
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 2.8e-42 175.3 116 75.9
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 8.2e-42 173.7 96 83.3
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 1.8e-41 172.6 119 73.9
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 3.1e-41 171.8 111 75.7
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.9e-41 170.6 112 75.9
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.9e-41 170.6 112 75.9
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 6.9e-41 170.6 99 82.8
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 9.1e-41 170.2 112 75.0
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 1.5e-40 169.5 114 74.6
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 1.5e-40 169.5 112 75.0
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 2.0e-40 169.1 101 78.2
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 4.5e-40 167.9 108 74.1
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 4.5e-40 167.9 108 74.1
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 4.5e-40 167.9 108 74.1
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 4.5e-40 167.9 96 78.1
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 5.9e-40 167.5 96 83.3
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 5.9e-40 167.5 108 75.0
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 5.9e-40 167.5 108 73.1
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 5.9e-40 167.5 112 75.0
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 7.7e-40 167.2 96 79.2
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 7.7e-40 167.2 108 74.1
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 1.0e-39 166.8 114 71.9
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.0e-39 166.8 112 74.1
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 1.7e-39 166.0 112 70.5
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 1.7e-39 166.0 112 70.5
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 1.7e-39 166.0 106 73.6
MELO3C010304.2 Cucumis melo HOM05D005191 ORTHO05D006725 2.2e-39 165.6 96 79.2
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 2.9e-39 165.2 102 76.5
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 2.9e-39 165.2 96 81.2
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 3.8e-39 164.9 96 80.2
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 3.8e-39 164.9 111 72.1
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 3.8e-39 164.9 115 68.7
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 6.5e-39 164.1 96 77.1
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 8.5e-39 163.7 114 68.4
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 1.1e-38 163.3 97 82.5
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 1.4e-38 162.9 102 74.5
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 1.4e-38 162.9 96 77.1
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 2.5e-38 162.2 96 81.2
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 3.2e-38 161.8 96 76.0
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 4.2e-38 161.4 96 78.1
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 4.2e-38 161.4 96 78.1
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 9.4e-38 160.2 113 71.7
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 9.4e-38 160.2 94 78.7
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 1.2e-37 159.8 111 66.7
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 1.2e-37 159.8 96 75.0
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 1.6e-37 159.5 96 80.2
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 2.1e-37 159.1 101 74.3
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 2.7e-37 158.7 115 66.1
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 3.6e-37 158.3 96 78.1
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 6.1e-37 157.5 102 72.5
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 7.9e-37 157.1 95 74.7
Nitab4.5_0005159g0020 Nicotiana tabacum HOM05D005191 ORTHO05D006725 7.9e-37 157.1 98 74.5
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 1.4e-36 156.4 98 74.5
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 1.8e-36 156.0 98 75.5
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 1.8e-36 156.0 115 67.8
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 3.0e-36 155.2 98 74.5
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 3.9e-36 154.8 102 70.6
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 3.9e-36 154.8 102 71.6
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 8.8e-36 153.7 112 67.9
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 1.1e-35 153.3 115 63.5
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 1.1e-35 153.3 112 67.9
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 1.1e-35 153.3 97 74.2
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 2.0e-35 152.5 96 74.0
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 2.6e-35 152.1 97 75.3
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 2.6e-35 152.1 110 66.4
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 2.6e-35 152.1 105 70.5
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 3.3e-35 151.8 121 65.3
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 3.3e-35 151.8 97 75.3
TPR.G7618 Trifolium pratense HOM05D005191 ORTHO05D006725 5.7e-35 151.0 74 98.6
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 7.4e-35 150.6 96 74.0
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 1.7e-34 149.4 115 63.5
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 1.7e-34 149.4 97 74.2
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 2.2e-34 149.1 98 72.4
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 2.8e-34 148.7 98 73.5
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 2.8e-34 148.7 105 69.5
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 4.8e-34 147.9 115 62.6
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 6.3e-34 147.5 97 72.2
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 1.4e-33 146.4 106 66.0
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 5.9e-32 141.0 90 74.4
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 7.7e-32 140.6 90 74.4
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 5.0e-31 137.9 124 56.5
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 6.5e-31 137.5 95 68.4
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 1.9e-30 136.0 92 68.5
Lj7A435G51 Lonicera japonica HOM05D005191 ORTHO05D006725 2.5e-30 135.6 75 82.7
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 3.0e-28 128.6 75 77.3
vmacro06157 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 3.0e-28 128.6 75 76.0
Nitab4.5_0000374g0090 Nicotiana tabacum HOM05D005191 ORTHO05D006725 7.4e-27 124.0 75 78.7
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 8.2e-26 120.6 96 61.5
unitig_0.g2715 Utricularia gibba HOM05D005191 ORTHO05D006725 8.2e-26 120.6 83 71.1
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 3.8e-23 111.7 97 51.5
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 8.5e-23 110.5 96 58.3
Actinidia38723 Actinidia chinensis HOM05D005191 ORTHO05D006725 4.4e-19 98.2 57 80.7
CBR_g29413 Chara braunii HOM05D005191 ORTHO05D006725 9.1e-17 90.5 87 51.7
GSVIVG01002648001 Vitis vinifera HOM05D005191 ORTHO05D006725 4.5e-16 88.2 51 78.4
Rhsim10G0150400 Rhododendron simsii HOM05D005191 ORTHO05D030537 8.0e-13 77.4 51 70.6
Sp3g26280 Schrenkiella parvula HOM05D005191 ORTHO05D012938 1.8e-12 76.3 46 76.1
Rhsim05G0138400 Rhododendron simsii HOM05D005191 ORTHO05D006725 5.2e-12 74.7 51 68.6
GSVIVG01012804001 Vitis vinifera HOM05D005191 ORTHO05D006725 6.8e-12 74.3 46 73.9
ATR0800G098 Amborella trichopoda HOM05D005191 ORTHO05D006725 2.6e-11 72.4 48 68.8
Thhalv10022959m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 2.6e-11 72.4 96 44.8
COL.COLO4_23752 Corchorus olitorius HOM05D005191 ORTHO05D016248 4.4e-11 71.6 54 66.7
COL.COLO4_21409 Corchorus olitorius HOM05D005191 ORTHO05D016248 9.8e-11 70.5 56 64.3
Rhsim13G0106800 Rhododendron simsii HOM05D005191 ORTHO05D006725 2.0e-08 62.8 45 64.4
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis HOM05D005191 ORTHO05D006725 1.3e-07 60.1 58 51.7
Cre06.g300650 Chlamydomonas reinhardtii HOM05D005191 ORTHO05D006725 1.5e-06 56.6 88 39.8
PRCOL_00001705 Prasinoderma coloniale HOM05D005191 ORTHO05D006725 5.5e-06 54.7 96 34.4


User provided reference genes

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