Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 6.7e-276 953.4 474 100.0
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 3.9e-247 857.8 474 88.8
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 3.9e-239 831.2 474 85.9
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 1.5e-238 829.3 474 85.9
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 7.3e-238 827.0 462 87.4
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 1.7e-234 815.8 473 83.7
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 4.9e-234 814.3 469 85.1
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 1.0e-231 806.6 469 84.6
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 1.1e-217 760.0 473 78.0
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.1e-214 750.0 412 88.6
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.1e-214 750.0 412 88.6
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 1.3e-213 746.5 461 78.3
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 1.6e-213 746.1 469 75.9
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 5.8e-211 737.6 474 74.5
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 7.6e-211 737.3 461 77.0
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 9.9e-211 736.9 463 75.4
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 2.9e-210 735.3 474 75.3
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 8.4e-210 733.8 469 75.3
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 1.1e-209 733.4 463 77.1
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 2.4e-209 732.3 463 76.2
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 3.2e-209 731.9 461 76.6
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 3.2e-209 731.9 474 73.6
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 7.1e-209 730.7 461 75.9
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 7.1e-209 730.7 460 75.4
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 1.2e-208 729.9 460 75.0
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 3.5e-208 728.4 477 73.6
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 4.6e-208 728.0 464 75.2
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 7.9e-208 727.2 459 75.8
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 2.3e-207 725.7 473 74.6
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 3.0e-207 725.3 463 74.1
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 3.9e-207 724.9 471 72.8
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 1.5e-206 723.0 461 74.2
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 9.6e-206 720.3 477 71.3
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 9.6e-206 720.3 461 73.8
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 1.4e-204 716.5 471 72.0
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 4.0e-204 714.9 402 86.3
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 4.0e-204 714.9 463 73.9
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 5.3e-204 714.5 463 72.6
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 1.2e-203 713.4 463 72.6
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 7.6e-203 710.7 475 71.6
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 4.9e-202 708.0 501 69.5
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 9.3e-201 703.7 497 70.6
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 3.5e-200 701.8 463 71.9
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 3.5e-200 701.8 493 69.6
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 7.9e-200 700.7 464 72.6
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 5.1e-199 698.0 493 68.4
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 3.3e-198 695.3 470 71.7
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 9.6e-198 693.7 493 68.0
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.1e-197 692.6 463 71.1
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.7e-197 691.8 496 67.5
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 8.1e-197 690.6 495 69.1
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 9.0e-196 687.2 469 69.5
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 1.1e-193 680.2 556 63.5
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 4.6e-192 674.9 534 63.9
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 1.3e-191 673.3 466 70.0
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 2.3e-191 672.5 461 70.1
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 1.3e-189 666.8 461 68.1
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 1.3e-186 656.8 466 66.1
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 4.2e-185 651.7 462 67.3
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 7.2e-185 651.0 497 62.8
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.0e-183 647.1 474 68.6
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 1.3e-181 640.2 461 63.8
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 2.8e-181 639.0 393 78.4
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 1.2e-176 623.6 474 64.3
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.1e-174 617.1 474 63.7
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 3.3e-174 615.5 469 63.3
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 7.4e-174 614.4 403 72.2
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 3.1e-172 609.0 477 62.7
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 5.9e-171 604.7 378 75.4
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 7.7e-171 604.4 459 64.9
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.6e-166 589.3 417 68.1
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 1.4e-164 583.6 492 60.8
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 2.6e-163 579.3 385 71.4
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 5.9e-163 578.2 472 62.9
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 1.7e-157 560.1 365 75.1
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 2.7e-155 552.7 474 59.7
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 2.5e-145 519.6 333 73.9
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 7.2e-145 518.1 322 75.8
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 2.8e-144 516.2 368 69.0
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 6.1e-136 488.4 373 68.1
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 1.6e-115 420.6 280 72.1
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 5.3e-95 352.4 235 72.3
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 5.9e-70 269.2 167 77.2
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 4.8e-64 249.6 448 31.9
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 2.7e-59 233.8 152 73.7
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 1.7e-53 214.5 236 52.1
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 2.8e-48 197.2 159 63.5
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 7.2e-44 182.6 119 68.1
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 5.9e-30 136.3 409 28.9
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 4.1e-23 113.6 77 68.8
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 1.4e-18 98.6 353 27.5
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 2.0e-17 94.7 57 78.9
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 7.5e-17 92.8 395 23.5
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 2.0e-14 84.7 62 62.9
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 1.0e-13 82.4 520 22.9
PRCOL_00001487 Prasinoderma coloniale HOM05D007497 ORTHO05D022249 5.4e-07 60.1 409 23.7


User provided reference genes

Program Settings