Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8830 Trifolium pratense HOM05D006547 ORTHO05D008112 1.7e-58 229.2 119 100.0
Ca_10619_v3 Cicer arietinum L. HOM05D006547 ORTHO05D008112 2.7e-40 168.7 126 73.8
Medtr1g096530 Medicago truncatula HOM05D006547 ORTHO05D008112 5.7e-30 134.4 118 63.6
Glyma.20G175000 Glycine max HOM05D006547 ORTHO05D008112 1.8e-28 129.4 128 63.3
Lj5g0010023 Lotus japonicus HOM05D006547 ORTHO05D008112 4.1e-28 128.3 119 59.7
Phvul.007G089100 Phaseolus vulgaris HOM05D006547 ORTHO05D008112 1.7e-26 122.9 119 63.0
Lalb_Chr02g0141791 Lupinus albus HOM05D006547 ORTHO05D008112 8.4e-26 120.6 121 62.0
Glyma.10G217100 Glycine max HOM05D006547 ORTHO05D008112 1.1e-25 120.2 128 61.7
VMungo0720G0102 Vigna mungo HOM05D006547 ORTHO05D008112 2.3e-23 112.5 118 59.3
arahy.Tifrunner.gnm1.ann1.BQK7VT Arachis hypogaea HOM05D006547 ORTHO05D008112 9.7e-22 107.1 126 55.6
Atru.chr5.966 Acer truncatum HOM05D006547 ORTHO05D008112 6.3e-21 104.4 143 44.8
Potri.014G118300 Populus trichocarpa HOM05D006547 ORTHO05D008112 3.4e-19 98.6 135 45.2
Potri.002G193300 Populus trichocarpa HOM05D006547 ORTHO05D008112 1.3e-18 96.7 136 47.1
TAR362G1145 Trochodendron aralioides HOM05D006547 ORTHO05D008112 8.5e-18 94.0 138 46.4
Duzib251G0664 Durio zibethinus HOM05D006547 ORTHO05D008112 5.5e-17 91.3 141 46.8
QL12p019056 Quercus lobata HOM05D006547 ORTHO05D008112 5.5e-17 91.3 140 47.1
Lalb_Chr03g0036161 Lupinus albus HOM05D006547 ORTHO05D008112 1.2e-16 90.1 130 49.2
Duzib248G0337 Durio zibethinus HOM05D006547 ORTHO05D008112 1.6e-16 89.7 140 46.4
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 2.1e-16 89.4 139 45.3
Hma1.2p1_0486F.1_g163490 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 2.1e-16 89.4 128 47.7
Sabra14G0087800 Salix brachista HOM05D006547 ORTHO05D008112 6.1e-16 87.8 124 45.2
Gohir.A12G145800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 7.9e-16 87.4 109 53.2
Gohir.D12G150400 Gossypium hirsutum HOM05D006547 ORTHO05D008112 7.9e-16 87.4 109 53.2
Gorai.008G161900 Gossypium raimondii HOM05D006547 ORTHO05D008112 7.9e-16 87.4 109 53.2
Thecc.02G266700 Theobroma cacao HOM05D006547 ORTHO05D008112 7.9e-16 87.4 138 44.9
TAR633G2779 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.0e-15 87.0 135 44.4
TAR365G0268 Trochodendron aralioides HOM05D006547 ORTHO05D008112 5.1e-15 84.7 115 50.4
Sabra02G0162800 Salix brachista HOM05D006547 ORTHO05D008112 8.8e-15 84.0 123 47.2
CiPaw.07G119400 Carya illinoinensis HOM05D006547 ORTHO05D008112 2.5e-14 82.4 144 41.7
FAN26G3307 Fragaria x ananassa HOM05D006547 ORTHO05D008112 2.5e-14 82.4 141 41.1
Ciclev10022819m.g Citrus clementina HOM05D006547 ORTHO05D008112 3.3e-14 82.0 137 45.3
CSS0011798 Camellia sinensis var. sinensis HOM05D006547 ORTHO05D008112 9.7e-14 80.5 135 40.0
COL.COLO4_23526 Corchorus olitorius HOM05D006547 ORTHO05D008112 9.7e-14 80.5 118 46.6
Cpa.g.sc18.81 Carica papaya HOM05D006547 ORTHO05D008112 1.3e-13 80.1 73 63.0
FAN28G2331 Fragaria x ananassa HOM05D006547 ORTHO05D008112 1.3e-13 80.1 144 41.0
RcHm_v2.0_Chr3g0487231 Rosa chinensis HOM05D006547 ORTHO05D008112 1.3e-13 80.1 141 41.1
Prupe.3G008700 Prunus persica HOM05D006547 ORTHO05D008112 2.2e-13 79.3 129 43.4
MD09G1285300 Malus domestica HOM05D006547 ORTHO05D008112 3.7e-13 78.6 55 69.1
FvH4_1g26990 Fragaria vesca HOM05D006547 ORTHO05D008112 6.3e-13 77.8 84 56.0
FAN19G2346 Fragaria x ananassa HOM05D006547 ORTHO05D008112 6.3e-13 77.8 84 56.0
MD17G1278000 Malus domestica HOM05D006547 ORTHO05D008112 8.2e-13 77.4 121 47.1
TWI36G0249 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 1.4e-12 76.6 132 47.0
CANSAT25G1528 Cannabis sativa HOM05D006547 ORTHO05D008112 1.8e-12 76.3 54 72.2
FAN23G3047 Fragaria x ananassa HOM05D006547 ORTHO05D008112 2.4e-12 75.9 144 38.9
Haze_05072 Corylus avellana HOM05D006547 ORTHO05D008112 5.3e-12 74.7 126 44.4
Duzib268G0572 Durio zibethinus HOM05D006547 ORTHO05D008112 5.3e-12 74.7 135 43.7
Manes.01G229900 Manihot esculenta HOM05D006547 ORTHO05D008112 5.3e-12 74.7 133 41.4
Cfa005764 Carpinus fangiana HOM05D006547 ORTHO05D008112 9.1e-12 73.9 76 57.9
Manes.05G013600 Manihot esculenta HOM05D006547 ORTHO05D008112 1.2e-11 73.6 98 49.0
EL10As5g23562 Beta vulgaris HOM05D006547 ORTHO05D008112 1.5e-11 73.2 74 54.1
CAN.G1280.37 Capsicum annuum HOM05D006547 ORTHO05D008112 1.5e-11 73.2 75 54.7
Thhalv10001736m.g Eutrema salsugineum HOM05D006547 ORTHO05D008112 1.5e-11 73.2 96 42.7
TWI18G0834 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 1.5e-11 73.2 131 45.0
Nitab4.5_0000363g0200 Nicotiana tabacum HOM05D006547 ORTHO05D008112 2.0e-11 72.8 69 62.3
BcaB01g03174 Brassica carinata HOM05D006547 ORTHO05D008112 3.4e-11 72.0 96 41.7
A05p00570 Brassica napus HOM05D006547 ORTHO05D008112 3.4e-11 72.0 96 41.7
CARHR142670 Cardamine hirsuta HOM05D006547 ORTHO05D008112 3.4e-11 72.0 96 42.7
DCAR_005744 Daucus carota HOM05D006547 ORTHO05D008112 3.4e-11 72.0 76 52.6
BraA05t19055Z Brassica rapa HOM05D006547 ORTHO05D008112 1.0e-10 70.5 96 40.6
MBI18_g22340_MAGBIO Magnolia biondii HOM05D006547 ORTHO05D008112 1.0e-10 70.5 118 37.3
BcaC01g05038 Brassica carinata HOM05D006547 ORTHO05D008112 1.3e-10 70.1 96 40.6
C03p30880 Brassica napus HOM05D006547 ORTHO05D008112 1.3e-10 70.1 96 40.6
BolC3t15440H Brassica oleracea HOM05D006547 ORTHO05D008112 1.3e-10 70.1 96 40.6
Carub.0004s3001 Capsella rubella HOM05D006547 ORTHO05D008112 1.3e-10 70.1 96 40.6
Lsat_1_v5_gn_9_4661 Lactuca sativa HOM05D006547 ORTHO05D008112 1.3e-10 70.1 126 39.7
AL302U10010 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 1.7e-10 69.7 100 40.0
AL4G46840 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 1.7e-10 69.7 100 40.0
DCAR_002885 Daucus carota HOM05D006547 ORTHO05D008112 1.7e-10 69.7 81 53.1
Hma1.2p1_0408F.1_g146550 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 1.7e-10 69.7 75 54.7
BolC4t21695H Brassica oleracea HOM05D006547 ORTHO05D008112 2.9e-10 68.9 96 40.6
Sc05g0000320 Simmondsia chinensis HOM05D006547 ORTHO05D008112 2.9e-10 68.9 74 51.4
Sc17g0000340 Simmondsia chinensis HOM05D006547 ORTHO05D008112 2.9e-10 68.9 100 49.0
PGSC0003DMG401007298 Solanum tuberosum HOM05D006547 ORTHO05D008112 2.9e-10 68.9 79 50.6
AT2G47270 Arabidopsis thaliana HOM05D006547 ORTHO05D008112 5.0e-10 68.2 96 39.6
C04p00620 Brassica napus HOM05D006547 ORTHO05D008112 5.0e-10 68.2 96 39.6
Gorai.002G189200 Gossypium raimondii HOM05D006547 ORTHO05D008112 5.0e-10 68.2 119 41.2
Oeu008480.1 Olea europaea HOM05D006547 ORTHO05D008112 5.0e-10 68.2 133 39.1
BcaB02g08786 Brassica carinata HOM05D006547 ORTHO05D008112 6.5e-10 67.8 94 40.4
PSO761G0312 Papaver somniferum HOM05D006547 ORTHO05D008112 1.1e-09 67.0 90 45.6
Gohir.A01G157750 Gossypium hirsutum HOM05D006547 ORTHO05D008112 1.9e-09 66.2 94 45.7
Gohir.D01G152800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 1.9e-09 66.2 119 41.2
HanXRQChr10g0285031 Helianthus annuus HOM05D006547 ORTHO05D008112 2.5e-09 65.9 134 35.8
Oeu038038.1 Olea europaea HOM05D006547 ORTHO05D008112 2.5e-09 65.9 80 55.0
PSO210G6541 Papaver somniferum HOM05D006547 ORTHO05D008112 2.5e-09 65.9 87 46.0
Sp4g29240 Schrenkiella parvula HOM05D006547 ORTHO05D008112 2.5e-09 65.9 87 46.0
Solyc06g009510.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 2.5e-09 65.9 122 39.3
CAN.G293.16 Capsicum annuum HOM05D006547 ORTHO05D008112 3.2e-09 65.5 111 40.5
ECA247G3592 Erigeron canadensis HOM05D006547 ORTHO05D008112 3.2e-09 65.5 75 50.7
Oeu044737.1 Olea europaea HOM05D006547 ORTHO05D008112 3.2e-09 65.5 89 41.6
vmacro02389 Vaccinium macrocarpon HOM05D006547 ORTHO05D008112 3.2e-09 65.5 89 47.2
Aa31LG1G28590 Aethionema arabicum HOM05D006547 ORTHO05D008112 4.2e-09 65.1 87 46.0
ATR0693G012 Amborella trichopoda HOM05D006547 ORTHO05D008112 4.2e-09 65.1 127 37.8
CiPaw.08G087700 Carya illinoinensis HOM05D006547 ORTHO05D008112 4.2e-09 65.1 111 44.1
HanXRQChr15g0465071 Helianthus annuus HOM05D006547 ORTHO05D008112 5.5e-09 64.7 92 43.5
Nitab4.5_0007407g0060 Nicotiana tabacum HOM05D006547 ORTHO05D008112 5.5e-09 64.7 63 55.6
BcaB06g29454 Brassica carinata HOM05D006547 ORTHO05D008112 7.2e-09 64.3 97 40.2
A04p34890 Brassica napus HOM05D006547 ORTHO05D008112 7.2e-09 64.3 97 39.2
BraSC79t46680Z Brassica rapa HOM05D006547 ORTHO05D008112 7.2e-09 64.3 97 39.2
Sopen06g004170 Solanum pennellii HOM05D006547 ORTHO05D008112 9.4e-09 63.9 79 46.8
Sopen01g031050 Solanum pennellii HOM05D006547 ORTHO05D008112 1.6e-08 63.2 132 37.1
THA.LOC104817451 Tarenaya hassleriana HOM05D006547 ORTHO05D008112 2.7e-08 62.4 54 61.1
Actinidia25863 Actinidia chinensis HOM05D006547 ORTHO05D008112 3.6e-08 62.0 84 48.8
DCAR_012331 Daucus carota HOM05D006547 ORTHO05D008112 3.6e-08 62.0 91 41.8
Peaxi162Scf00058g00236 Petunia axillaris HOM05D006547 ORTHO05D008112 3.6e-08 62.0 61 59.0
Solyc01g079270.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 3.6e-08 62.0 132 37.9
PGSC0003DMG400009058 Solanum tuberosum HOM05D006547 ORTHO05D008112 3.6e-08 62.0 130 36.2
SGA_v2.0_scaffold376G50290 Striga asiatica HOM05D006547 ORTHO05D008112 6.1e-08 61.2 114 42.1
DCAR_018278 Daucus carota HOM05D006547 ORTHO05D008112 1.0e-07 60.5 85 43.5
Gohir.A04G137350 Gossypium hirsutum HOM05D034510 ORTHO05D008112 1.4e-07 60.1 106 34.9
SalBow3G4324 Salvia bowleyana HOM05D006547 ORTHO05D008112 1.8e-07 59.7 69 47.8
Ciclev10006764m.g Citrus clementina HOM05D006547 ORTHO05D008112 2.3e-07 59.3 59 50.8
ClCG10G011560 Citrullus lanatus HOM05D006547 ORTHO05D008112 3.0e-07 58.9 87 44.8
C04p72660 Brassica napus HOM05D006547 ORTHO05D008112 6.7e-07 57.8 98 39.8
Nn3g21744 Nelumbo nucifera HOM05D006547 ORTHO05D008112 6.7e-07 57.8 120 37.5
Nitab4.5_0000222g0070 Nicotiana tabacum HOM05D006547 ORTHO05D008112 6.7e-07 57.8 63 49.2
Rhsim13G0003400 Rhododendron simsii HOM05D006547 ORTHO05D008112 1.1e-06 57.0 80 47.5
SGA_v2.0_scaffold334G49085 Striga asiatica HOM05D006547 ORTHO05D008112 1.1e-06 57.0 73 46.6
Migut.D00065 Erythranthe guttata HOM05D006547 ORTHO05D008112 1.5e-06 56.6 78 47.4
CsaV3_3G026610 Cucumis sativus L. HOM05D006547 ORTHO05D008112 2.6e-06 55.8 83 43.4
Sed0005978 Sechium edule HOM05D024969 ORTHO05D025069 2.6e-06 55.8 113 36.3
MELO3C012934.2 Cucumis melo HOM05D006547 ORTHO05D008112 3.3e-06 55.5 83 42.2
MBI19_g03260_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 3.3e-06 55.5 108 34.3
Sed0010162 Sechium edule HOM05D024969 ORTHO05D025069 3.3e-06 55.5 118 34.7
Sed0017392 Sechium edule HOM05D006547 ORTHO05D008112 3.3e-06 55.5 107 36.4
Nn4g25552 Nelumbo nucifera HOM05D006547 ORTHO05D008112 4.4e-06 55.1 134 35.1
Gohir.D04G180550 Gossypium hirsutum HOM05D034510 ORTHO05D047560 5.7e-06 54.7 95 31.6
Gorai.012G173700 Gossypium raimondii HOM05D034510 ORTHO05D047560 5.7e-06 54.7 95 31.6
MSTRG.21702 Avicennia marina HOM05D006547 ORTHO05D008112 7.4e-06 54.3 81 45.7


User provided reference genes

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