Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 3.9e-75 284.6 138 100.0
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 8.2e-73 276.9 138 94.9
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 1.9e-69 265.8 138 89.1
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 3.0e-67 258.5 138 87.7
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 5.7e-66 254.2 138 85.5
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 5.9e-63 244.2 135 84.4
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 2.9e-62 241.9 138 82.6
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 6.1e-60 234.2 135 80.0
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 6.1e-60 234.2 135 80.0
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 1.0e-59 233.4 136 78.7
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 2.8e-57 225.3 133 75.9
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 2.8e-57 225.3 136 72.8
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 4.8e-57 224.6 139 73.4
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 6.3e-57 224.2 136 75.7
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 1.8e-56 222.6 138 73.2
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 3.1e-56 221.9 135 73.3
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 7.0e-56 220.7 138 73.2
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.6e-55 218.8 138 70.3
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 3.5e-55 218.4 135 72.6
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 3.5e-55 218.4 135 72.6
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 7.7e-55 217.2 136 72.1
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 7.7e-55 217.2 136 69.9
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.0e-54 216.9 136 72.1
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.0e-54 216.9 138 70.3
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 1.3e-54 216.5 135 71.9
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.3e-54 216.5 135 71.9
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 2.2e-54 215.7 136 75.0
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 6.5e-54 214.2 136 71.3
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 6.5e-54 214.2 138 70.3
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 6.5e-54 214.2 136 69.9
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 1.5e-53 213.0 136 72.8
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 2.5e-53 212.2 134 70.9
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 2.5e-53 212.2 141 70.2
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 4.2e-53 211.5 136 71.3
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 9.4e-53 210.3 136 69.1
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.2e-52 209.9 133 72.9
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.6e-52 209.5 133 71.4
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.6e-52 209.5 131 72.5
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 2.1e-52 209.1 138 67.4
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 2.1e-52 209.1 136 67.6
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 2.7e-52 208.8 137 70.1
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 2.7e-52 208.8 137 70.1
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 2.7e-52 208.8 137 70.1
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 2.7e-52 208.8 132 70.5
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 3.6e-52 208.4 117 82.1
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 4.7e-52 208.0 136 67.6
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 4.7e-52 208.0 141 67.4
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 6.1e-52 207.6 139 69.8
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.0e-51 206.8 119 79.0
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.4e-51 206.5 136 69.1
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 1.8e-51 206.1 133 67.7
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 3.9e-51 204.9 119 78.2
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 3.9e-51 204.9 133 71.4
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 8.8e-51 203.8 135 68.1
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.1e-50 203.4 127 72.4
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.1e-50 203.4 127 72.4
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.5e-50 203.0 133 69.2
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 2.6e-50 202.2 133 65.4
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 5.7e-50 201.1 139 65.5
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 9.7e-50 200.3 135 67.4
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 1.3e-49 199.9 136 69.9
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 4.8e-49 198.0 137 66.4
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 6.3e-49 197.6 137 66.4
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 8.2e-49 197.2 119 73.9
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 8.2e-49 197.2 136 69.1
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 1.8e-48 196.1 138 65.2
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 1.8e-48 196.1 136 64.0
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 1.8e-48 196.1 139 64.7
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 1.8e-48 196.1 119 73.9
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 5.3e-48 194.5 136 67.6
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 7.0e-48 194.1 132 64.4
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 9.1e-48 193.7 138 67.4
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 9.1e-48 193.7 135 66.7
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 1.2e-47 193.4 141 64.5
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 2.0e-47 192.6 136 62.5
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 2.6e-47 192.2 136 62.5
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 2.6e-47 192.2 136 62.5
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 3.5e-47 191.8 136 62.5
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 3.5e-47 191.8 136 65.4
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 3.5e-47 191.8 136 68.4
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 7.7e-47 190.7 136 61.8
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 7.7e-47 190.7 124 72.6
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 1.7e-46 189.5 136 64.7
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 2.2e-46 189.1 124 72.6
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 2.9e-46 188.7 136 63.2
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 3.8e-46 188.3 134 64.2
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 5.0e-46 188.0 137 60.6
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 6.5e-46 187.6 138 64.5
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 6.5e-46 187.6 138 65.2
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.1e-45 186.8 136 64.0
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 1.5e-45 186.4 134 63.4
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 1.5e-45 186.4 138 63.8
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 2.5e-45 185.7 138 60.9
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 2.5e-45 185.7 137 61.3
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 3.2e-45 185.3 138 61.6
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 7.2e-45 184.1 136 64.7
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 7.2e-45 184.1 135 60.7
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 1.2e-44 183.3 137 60.6
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 2.1e-44 182.6 137 60.6
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 4.7e-44 181.4 106 73.6
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 1.8e-43 179.5 137 59.9
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 1.8e-43 179.5 138 58.7
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 8.8e-43 177.2 136 63.2
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 5.7e-42 174.5 138 58.0
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 7.5e-42 174.1 132 59.1
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 9.8e-42 173.7 110 70.9
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 1.1e-40 170.2 141 56.7
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 5.4e-40 167.9 127 60.6
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 1.2e-39 166.8 140 56.4
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.6e-39 166.4 116 66.4
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 3.5e-39 165.2 109 67.0
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 1.1e-37 160.2 122 62.3
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 9.4e-37 157.1 128 60.9
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.6e-36 156.4 138 54.3
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 2.3e-35 152.5 95 72.6
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 4.4e-34 148.3 117 58.1
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 1.3e-33 146.7 125 51.2
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 3.7e-33 145.2 122 54.1
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 8.3e-33 144.1 92 72.8
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 1.1e-32 143.7 111 63.1
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 3.1e-32 142.1 124 56.5
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 3.1e-32 142.1 117 53.0
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 9.1e-32 140.6 118 53.4
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 5.9e-31 137.9 114 55.3
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 2.5e-29 132.5 82 69.5
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.8e-27 126.3 86 66.3
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 2.3e-27 125.9 85 67.1
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 2.2e-25 119.4 119 47.1
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 2.0e-18 96.3 89 50.6
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 1.3e-14 83.6 87 50.6
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 5.6e-13 78.2 73 52.1
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 3.5e-07 58.9 46 56.5
CsaV3_7G018800 Cucumis sativus L. HOM05D006058 ORTHO05D000001 1.3e-06 57.0 43 51.2


User provided reference genes

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