Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 9.6e-101 370.2 187 100.0
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 2.1e-79 299.3 181 81.8
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 2.4e-75 285.8 185 77.8
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 4.1e-75 285.0 182 80.2
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 1.5e-69 266.5 186 72.6
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 2.8e-68 262.3 186 71.0
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 3.1e-67 258.8 189 69.8
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 5.3e-67 258.1 186 70.4
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 1.1e-64 250.4 178 68.5
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 1.9e-56 223.0 187 57.8
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 4.2e-56 221.9 196 54.6
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 5.5e-56 221.5 184 58.7
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 2.1e-55 219.5 177 60.5
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 3.6e-55 218.8 184 58.2
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 6.1e-55 218.0 184 58.2
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 8.0e-55 217.6 188 59.0
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 8.0e-55 217.6 186 56.5
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 1.0e-54 217.2 193 56.0
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 1.4e-54 216.9 188 59.0
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 1.8e-54 216.5 181 63.0
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 5.2e-54 214.9 178 58.4
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 3.4e-53 212.2 187 56.7
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 3.4e-53 212.2 183 57.9
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 4.4e-53 211.8 184 57.6
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 1.3e-52 210.3 185 55.7
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 3.7e-52 208.8 188 57.4
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 8.3e-52 207.6 177 57.6
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 1.1e-51 207.2 178 60.1
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 3.1e-51 205.7 194 53.1
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 4.1e-51 205.3 180 56.7
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 9.1e-51 204.1 180 57.2
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 2.0e-50 203.0 177 58.2
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 2.7e-50 202.6 177 56.5
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 2.7e-50 202.6 175 60.0
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 2.7e-50 202.6 190 57.4
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 3.5e-50 202.2 177 56.5
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 3.5e-50 202.2 177 58.2
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 4.5e-50 201.8 207 51.7
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 1.0e-49 200.7 185 54.6
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 1.0e-49 200.7 179 55.3
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 1.0e-49 200.7 188 54.3
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 1.3e-49 200.3 182 55.5
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 1.7e-49 199.9 177 54.2
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 2.2e-49 199.5 188 53.7
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 5.0e-49 198.4 176 56.8
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 6.5e-49 198.0 181 54.7
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 6.5e-49 198.0 181 54.1
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 6.5e-49 198.0 181 54.1
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 8.5e-49 197.6 160 61.2
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 2.5e-48 196.1 161 58.4
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.5e-48 196.1 177 57.1
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 2.5e-48 196.1 182 54.9
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 3.2e-48 195.7 174 58.0
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 7.2e-48 194.5 181 54.1
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 9.4e-48 194.1 177 55.9
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 1.2e-47 193.7 183 54.1
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 1.2e-47 193.7 177 53.1
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 1.2e-47 193.7 179 54.2
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 2.7e-47 192.6 181 53.6
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 2.7e-47 192.6 168 56.0
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 3.6e-47 192.2 184 55.4
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 6.1e-47 191.4 186 51.6
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 1.8e-46 189.9 183 55.2
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 2.0e-45 186.4 180 48.9
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 2.6e-45 186.0 193 50.8
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 9.8e-45 184.1 160 54.4
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 1.3e-44 183.7 167 57.5
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 1.7e-44 183.3 168 53.6
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 1.8e-43 179.9 189 51.9
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 4.1e-43 178.7 184 48.4
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 1.2e-42 177.2 183 51.4
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 7.7e-42 174.5 175 48.0
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 1.0e-38 164.1 174 48.3
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.0e-29 133.3 162 48.8
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 5.8e-29 131.7 203 36.9
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 1.3e-28 130.6 180 42.8
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.2e-28 129.8 173 42.8
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 1.9e-27 126.7 241 32.8
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 7.0e-27 124.8 170 41.2
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 2.3e-25 119.8 250 29.6
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 3.0e-25 119.4 163 39.9
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 7.3e-24 114.8 96 61.5
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.6e-23 112.5 180 39.4
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 1.4e-22 110.5 195 35.4
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 2.3e-22 109.8 211 33.6
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 5.8e-21 105.1 90 51.1
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.9e-20 102.8 173 37.6
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 6.4e-20 101.7 114 49.1
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.5e-18 95.9 174 35.1
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 6.0e-18 95.1 185 33.5
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.0e-17 94.4 167 34.1
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 5.1e-17 92.0 172 33.1
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 5.1e-17 92.0 182 34.6
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 7.3e-16 88.2 178 33.1
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.6e-13 79.7 125 36.8
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 2.2e-12 76.6 84 44.0
Actinidia09356 Actinidia chinensis HOM05D007512 ORTHO05D009524 7.1e-11 71.6 103 42.7
Duzib177G0331 Durio zibethinus HOM05D000125 ORTHO05D020513 2.1e-10 70.1 118 36.4
Sabra01G0030800 Salix brachista HOM05D007512 ORTHO05D009524 3.5e-10 69.3 112 39.3
COL.COLO4_13576 Corchorus olitorius HOM05D007512 ORTHO05D020513 3.0e-09 66.2 110 36.4
Sabra09G0120600 Salix brachista HOM05D000125 ORTHO05D020513 4.3e-08 62.4 117 35.9
CSS0000822 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D009524 4.7e-07 58.9 115 33.0
Actinidia14260 Actinidia chinensis HOM05D007512 ORTHO05D009524 8.9e-06 54.7 76 39.5


User provided reference genes

Program Settings