Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8712 Trifolium pratense HOM05D003601 ORTHO05D004896 9.8e-113 410.2 219 100.0
TPR.G20293 Trifolium pratense HOM05D003601 ORTHO05D004896 5.4e-87 324.7 196 91.8
Medtr7g109250 Medicago truncatula HOM05D003601 ORTHO05D004896 1.7e-80 303.1 196 83.2
Ca_09198_v3 Cicer arietinum L. HOM05D003601 ORTHO05D004896 3.2e-79 298.9 196 84.2
arahy.Tifrunner.gnm1.ann1.JS26LE Arachis hypogaea HOM05D003601 ORTHO05D004896 2.0e-73 279.6 194 77.8
arahy.Tifrunner.gnm1.ann1.EN9PMD Arachis hypogaea HOM05D003601 ORTHO05D004896 4.5e-73 278.5 194 77.3
Glyma.03G025400 Glycine max HOM05D003601 ORTHO05D004896 4.6e-70 268.5 197 74.1
Glyma.05G210600 Glycine max HOM05D003601 ORTHO05D004896 1.3e-69 266.9 197 74.1
Phvul.010G084000 Phaseolus vulgaris HOM05D003601 ORTHO05D004896 1.8e-69 266.5 197 73.6
VMungo0331G0886 Vigna mungo HOM05D003601 ORTHO05D004896 1.8e-69 266.5 197 73.6
Lalb_Chr04g0261591 Lupinus albus HOM05D003601 ORTHO05D004896 3.0e-69 265.8 197 75.1
QL01p016478 Quercus lobata HOM05D003601 ORTHO05D004896 1.1e-63 247.3 185 71.4
QL05p061139 Quercus lobata HOM05D003601 ORTHO05D004896 5.5e-63 245.0 185 71.4
Haze_15640 Corylus avellana HOM05D003601 ORTHO05D004896 9.3e-63 244.2 188 70.2
Lj1g0023495 Lotus japonicus HOM05D003601 ORTHO05D004896 1.0e-61 240.7 182 72.5
TWI59G1066 Tripterygium wilfordii HOM05D003601 ORTHO05D004896 1.3e-61 240.4 195 69.2
Sed0004785 Sechium edule HOM05D003601 ORTHO05D004896 3.0e-61 239.2 185 71.9
ClCG08G004950 Citrullus lanatus HOM05D003601 ORTHO05D004896 3.9e-61 238.8 185 71.4
Duzib151G0301 Durio zibethinus HOM05D003601 ORTHO05D004896 6.7e-61 238.0 193 66.3
Sabra14G0071300 Salix brachista HOM05D003601 ORTHO05D004896 6.7e-61 238.0 185 74.6
QL05p061428 Quercus lobata HOM05D003601 ORTHO05D004896 1.1e-60 237.3 185 68.1
Manes.07G071780 Manihot esculenta HOM05D003601 ORTHO05D004896 1.9e-60 236.5 185 69.2
Manes.02G115900 Manihot esculenta HOM05D003601 ORTHO05D004896 4.3e-60 235.3 185 69.2
CsaV3_6G034170 Cucumis sativus L. HOM05D003601 ORTHO05D004896 9.6e-60 234.2 186 69.9
MELO3C010640.2 Cucumis melo HOM05D003601 ORTHO05D004896 1.6e-59 233.4 186 69.9
QL05p063445 Quercus lobata HOM05D003601 ORTHO05D004896 1.6e-59 233.4 196 66.8
CiPaw.01G074700 Carya illinoinensis HOM05D003601 ORTHO05D004896 3.7e-59 232.3 188 67.6
Dinv32573 Davidia involucrata HOM05D003601 ORTHO05D004896 8.2e-59 231.1 189 67.2
Rhsim07G0005200 Rhododendron simsii HOM05D003601 ORTHO05D004896 8.2e-59 231.1 190 67.9
Gohir.D02G113600 Gossypium hirsutum HOM05D003601 ORTHO05D004896 1.8e-58 229.9 190 66.8
Potri.014G097300 Populus trichocarpa HOM05D003601 ORTHO05D004896 1.8e-58 229.9 185 73.0
Atru.chr5.650 Acer truncatum HOM05D003601 ORTHO05D004896 4.1e-58 228.8 184 67.4
Ciclev10021165m.g Citrus clementina HOM05D003601 ORTHO05D004896 5.3e-58 228.4 184 67.4
Eucgr.L01590 Eucalyptus grandis HOM05D003601 ORTHO05D004896 6.9e-58 228.0 198 63.6
TAR374G1433 Trochodendron aralioides HOM05D003601 ORTHO05D004896 6.9e-58 228.0 184 66.3
TAR374G1718 Trochodendron aralioides HOM05D003601 ORTHO05D004896 6.9e-58 228.0 184 66.3
Gorai.005G129300 Gossypium raimondii HOM05D003601 ORTHO05D004896 1.2e-57 227.3 190 66.3
Ah.01g018710 Amaranthus hybridus HOM05D003601 ORTHO05D004896 2.0e-57 226.5 189 65.1
Gohir.A03G095300 Gossypium hirsutum HOM05D003601 ORTHO05D004896 2.0e-57 226.5 190 65.8
CANSAT11G0274 Cannabis sativa HOM05D003601 ORTHO05D004896 2.6e-57 226.1 196 64.8
Hund16704 Selenicereus undatus HOM05D003601 ORTHO05D004896 2.6e-57 226.1 200 65.5
Eucgr.D01238 Eucalyptus grandis HOM05D003601 ORTHO05D004896 3.4e-57 225.7 198 63.6
GSVIVG01027082001 Vitis vinifera HOM05D003601 ORTHO05D004896 3.4e-57 225.7 196 64.3
Thecc.04G197100 Theobroma cacao HOM05D003601 ORTHO05D004896 4.5e-57 225.3 193 65.8
Carub.0001s0088 Capsella rubella HOM05D003601 ORTHO05D004896 7.6e-57 224.6 195 63.1
Cpa.g.sc273.4 Carica papaya HOM05D003601 ORTHO05D004896 1.0e-56 224.2 198 66.2
vmacro23173 Vaccinium macrocarpon HOM05D003601 ORTHO05D004896 1.3e-56 223.8 190 66.3
Cc05_g04050 Coffea canephora HOM05D003601 ORTHO05D004896 2.2e-56 223.0 190 65.8
PGR042G1585 Punica granatum HOM05D003601 ORTHO05D004896 3.8e-56 222.2 185 63.8
Nn2g12387 Nelumbo nucifera HOM05D003601 ORTHO05D004896 6.5e-56 221.5 184 67.9
EL10Ac9g21625 Beta vulgaris HOM05D003601 ORTHO05D004896 8.5e-56 221.1 193 62.7
Lj8C4T0 Lonicera japonica HOM05D003601 ORTHO05D004896 1.9e-55 219.9 197 65.5
Sc23g0002160 Simmondsia chinensis HOM05D003601 ORTHO05D004896 1.9e-55 219.9 193 63.7
TPR.G29640 Trifolium pratense HOM05D003601 ORTHO05D004896 1.9e-55 219.9 196 66.3
PGSC0003DMG400013655 Solanum tuberosum HOM05D003601 ORTHO05D004896 3.2e-55 219.2 195 64.1
AT1G01350 Arabidopsis thaliana HOM05D003601 ORTHO05D004896 5.5e-55 218.4 195 62.1
CSS0034548 Camellia sinensis var. sinensis HOM05D003601 ORTHO05D004896 9.3e-55 217.6 192 64.1
Nitab4.5_0001815g0040 Nicotiana tabacum HOM05D003601 ORTHO05D004896 9.3e-55 217.6 200 62.0
AL1G11100 Arabidopsis lyrata HOM05D003601 ORTHO05D004896 2.1e-54 216.5 195 60.5
Nitab4.5_0000614g0020 Nicotiana tabacum HOM05D003601 ORTHO05D004896 2.1e-54 216.5 200 61.5
Sopen02g026770 Solanum pennellii HOM05D003601 ORTHO05D004896 2.7e-54 216.1 195 63.1
Sp1g00940 Schrenkiella parvula HOM05D003601 ORTHO05D004896 3.6e-54 215.7 195 61.5
COL.COLO4_20208 Corchorus olitorius HOM05D003601 ORTHO05D004896 1.0e-53 214.2 191 62.8
Dinv18735 Davidia involucrata HOM05D003601 ORTHO05D004896 1.3e-53 213.8 185 64.9
Thhalv10009432m.g Eutrema salsugineum HOM05D003601 ORTHO05D004896 1.8e-53 213.4 179 66.5
THA.LOC104812142 Tarenaya hassleriana HOM05D003601 ORTHO05D004896 1.8e-53 213.4 181 67.4
Aa31LG11G12300 Aethionema arabicum HOM05D003601 ORTHO05D004896 2.3e-53 213.0 184 65.2
BcaB03g13574 Brassica carinata HOM05D003601 ORTHO05D004896 2.3e-53 213.0 195 62.6
AT5G06420 Arabidopsis thaliana HOM05D003601 ORTHO05D004896 3.0e-53 212.6 186 62.4
EL10Ac5g12528 Beta vulgaris HOM05D003601 ORTHO05D004896 3.9e-53 212.2 191 62.3
BraA10t42337Z Brassica rapa HOM05D003601 ORTHO05D004896 5.1e-53 211.8 201 59.7
DCAR_004784 Daucus carota HOM05D003601 ORTHO05D004896 8.7e-53 211.1 192 61.5
BolC5t28850H Brassica oleracea HOM05D003601 ORTHO05D004896 1.1e-52 210.7 196 60.2
BcaB03g13575 Brassica carinata HOM05D003601 ORTHO05D004896 1.9e-52 209.9 196 60.7
A10p00590 Brassica napus HOM05D003601 ORTHO05D004896 1.9e-52 209.9 201 59.7
Duzib212G0966 Durio zibethinus HOM05D003601 ORTHO05D004896 1.9e-52 209.9 184 63.0
Glyma.08G286000 Glycine max HOM05D003601 ORTHO05D004896 3.3e-52 209.1 158 72.2
Peaxi162Scf01343g00152 Petunia axillaris HOM05D003601 ORTHO05D004896 5.7e-52 208.4 194 61.3
CARHR001090 Cardamine hirsuta HOM05D003601 ORTHO05D004896 7.4e-52 208.0 180 63.9
ECA236G1416 Erigeron canadensis HOM05D003601 ORTHO05D004896 7.4e-52 208.0 189 62.4
C05p00620 Brassica napus HOM05D003601 ORTHO05D004896 2.8e-51 206.1 182 62.6
RcHm_v2.0_Chr3g0492261 Rosa chinensis HOM05D003601 ORTHO05D004896 3.1e-50 202.6 185 61.1
Prupe.6G288300 Prunus persica HOM05D003601 ORTHO05D004896 4.1e-50 202.2 185 59.5
unitig_0.g331 Utricularia gibba HOM05D003601 ORTHO05D004896 4.1e-50 202.2 197 60.9
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 2.6e-49 199.5 185 61.6
PSO541G5643 Papaver somniferum HOM05D003601 ORTHO05D004896 3.4e-49 199.1 196 60.7
Psat3g020760 Pisum sativum HOM05D003601 ORTHO05D004896 3.4e-49 199.1 154 74.7
Actinidia10120 Actinidia chinensis HOM05D003601 ORTHO05D004896 1.0e-48 197.6 188 62.8
CAN.G809.19 Capsicum annuum HOM05D003601 ORTHO05D004896 1.0e-48 197.6 168 65.5
MSTRG.17333 Avicennia marina HOM05D003601 ORTHO05D004896 1.3e-48 197.2 182 62.1
Cfa003813 Carpinus fangiana HOM05D003601 ORTHO05D004896 2.9e-48 196.1 188 59.6
ATR1127G077 Amborella trichopoda HOM05D003601 ORTHO05D004896 3.8e-48 195.7 185 62.2
Peaxi162Scf00036g00412 Petunia axillaris HOM05D003601 ORTHO05D004896 3.8e-48 195.7 179 63.7
FvH4_6g10411 Fragaria vesca HOM05D003601 ORTHO05D004896 5.0e-48 195.3 180 61.7
FAN14G0738 Fragaria x ananassa HOM05D003601 ORTHO05D004896 6.5e-48 194.9 180 61.7
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 1.1e-47 194.1 185 60.0
MD01G1079100 Malus domestica HOM05D003601 ORTHO05D004896 1.4e-47 193.7 185 60.5
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 1.9e-47 193.4 185 60.0
AUR62016842 Chenopodium quinoa HOM05D003601 ORTHO05D004896 3.2e-47 192.6 190 59.5
Mapoly0066s0113 Marchantia polymorpha HOM05D003601 ORTHO05D004896 4.2e-47 192.2 193 59.1
PSO675G3308 Papaver somniferum HOM05D003601 ORTHO05D004896 5.5e-47 191.8 197 61.9
SEGI_12555 Sequoiadendron giganteum HOM05D003601 ORTHO05D004896 9.4e-47 191.0 190 58.4
DCAR_004777 Daucus carota HOM05D003601 ORTHO05D004896 6.1e-46 188.3 193 55.4
HanXRQChr04g0120251 Helianthus annuus HOM05D003601 ORTHO05D004896 7.9e-46 188.0 195 60.0
SHI13229 Sapria himalayana HOM05D003601 ORTHO05D004896 7.9e-46 188.0 180 61.7
Lj8C0T4 Lonicera japonica HOM05D003601 ORTHO05D004896 8.8e-45 184.5 197 59.9
SGA_v2.0_scaffold5G03009 Striga asiatica HOM05D003601 ORTHO05D004896 1.5e-44 183.7 202 57.9
SGA_v2.0_scaffold25G10756 Striga asiatica HOM05D003601 ORTHO05D004896 4.4e-44 182.2 202 57.4
HanXRQChr06g0170651 Helianthus annuus HOM05D003601 ORTHO05D004896 9.7e-44 181.0 185 60.5
Rhsim01G0171500 Rhododendron simsii HOM05D003601 ORTHO05D004896 2.4e-42 176.4 193 54.4
LjContig00564g0001173 Lotus japonicus HOM05D003601 ORTHO05D004896 4.1e-42 175.6 190 59.5
Aqoxy3G00289 Aquilegia oxysepala HOM05D003601 ORTHO05D004896 5.3e-42 175.3 197 59.9
Lsat_1_v5_gn_7_1360 Lactuca sativa HOM05D003601 ORTHO05D004896 9.1e-42 174.5 192 59.4
MD04G1169800 Malus domestica HOM05D003601 ORTHO05D004896 3.4e-41 172.6 185 54.1
HPP92_024723 Vanilla planifolia HOM05D003601 ORTHO05D004896 5.9e-41 171.8 187 56.1
Peaxi162Scf00130g01110 Petunia axillaris HOM05D003601 ORTHO05D004896 1.7e-40 170.2 162 59.3
AagrBONN_evm.TU.Sc2ySwM_344.3813 Anthoceros agrestis HOM05D003601 ORTHO05D004896 3.8e-40 169.1 178 53.4
vmacro10191 Vaccinium macrocarpon HOM05D003601 ORTHO05D004896 6.5e-40 168.3 188 53.7
vmacro20852 Vaccinium macrocarpon HOM05D003601 ORTHO05D004896 6.5e-40 168.3 188 53.7
Sed0000777 Sechium edule HOM05D003601 ORTHO05D004896 8.5e-40 167.9 137 67.2
Nitab4.5_0005819g0040 Nicotiana tabacum HOM05D003601 ORTHO05D004896 2.5e-39 166.4 186 54.3
Migut.B01852 Erythranthe guttata HOM05D003601 ORTHO05D004896 9.4e-39 164.5 184 54.3
TPR.G13782 Trifolium pratense HOM05D003601 ORTHO05D037558 1.2e-38 164.1 103 90.3
CSS0019404 Camellia sinensis var. sinensis HOM05D003601 ORTHO05D004896 1.6e-38 163.7 119 73.9
Thecc.07G081100 Theobroma cacao HOM05D003601 ORTHO05D004896 3.6e-38 162.5 180 55.6
Pp3c8_16180 Physcomitrium patens HOM05D003601 ORTHO05D004896 3.9e-37 159.1 184 53.3
Nitab4.5_0010133g0020 Nicotiana tabacum HOM05D003601 ORTHO05D004896 3.3e-36 156.0 108 75.0
ECA247G1228 Erigeron canadensis HOM05D003601 ORTHO05D004896 4.1e-34 149.1 108 73.1
Peaxi162Scf00119g01222 Petunia axillaris HOM05D003601 ORTHO05D004896 1.9e-31 140.2 101 72.3
TPR.G20298 Trifolium pratense HOM05D003601 ORTHO05D037558 1.9e-31 140.2 98 83.7
Zm00001eb204190 Zea mays HOM05D003601 ORTHO05D004896 1.9e-31 140.2 190 52.6
QL04p075806 Quercus lobata HOM05D003601 ORTHO05D004896 1.2e-30 137.5 116 67.2
SMO351G0471 Selaginella moellendorffii HOM05D003601 ORTHO05D004896 2.0e-28 130.2 197 43.1
CARHR001100 Cardamine hirsuta HOM05D003601 ORTHO05D004896 7.5e-28 128.3 91 72.5
CDE08G0937 Ceratophyllum demersum HOM05D003601 ORTHO05D004896 8.2e-27 124.8 185 49.2
Hma1.2p1_1566F.1_g291000 Hydrangea macrophylla HOM05D003601 ORTHO05D004896 1.4e-26 124.0 127 58.3
QL05p061570 Quercus lobata HOM05D003601 ORTHO05D004896 1.4e-26 124.0 121 57.9
MD07G1148000 Malus domestica HOM05D003601 ORTHO05D004896 3.1e-26 122.9 88 69.3
Os02g0301000 Oryza sativa ssp. japonica HOM05D003601 ORTHO05D004896 1.3e-24 117.5 187 48.1
Duzib212G0206 Durio zibethinus HOM05D003601 ORTHO05D004896 8.5e-24 114.8 175 46.3
Cre06.g254650 Chlamydomonas reinhardtii HOM05D003601 ORTHO05D004896 1.1e-23 114.4 126 50.0
Hma1.2p1_0180F.1_g079650 Hydrangea macrophylla HOM05D003601 ORTHO05D004896 3.2e-23 112.8 143 49.7
Actinidia26616 Actinidia chinensis HOM05D003601 ORTHO05D004896 4.2e-23 112.5 173 49.7
AagrBONN_evm.TU.Sc2ySwM_344.929 Anthoceros agrestis HOM05D003601 ORTHO05D004896 3.6e-22 109.4 94 62.8
COL.COLO4_33292 Corchorus olitorius HOM05D002650 ORTHO05D002924 3.0e-21 106.3 195 40.0
EL10Ac9g21063 Beta vulgaris HOM05D003601 ORTHO05D004896 2.0e-20 103.6 112 54.5
PSO824G0013 Papaver somniferum HOM05D003601 ORTHO05D004896 4.8e-19 99.0 198 36.9
MCO16G487 Micromonas commoda HOM05D003601 ORTHO05D004896 5.9e-17 92.0 92 48.9
CBR_g49218 Chara braunii HOM05D003601 ORTHO05D004896 4.0e-13 79.3 176 36.9
CBR_g26342 Chara braunii HOM05D003601 ORTHO05D004896 3.4e-12 76.3 90 51.1
Medtr7g108868 Medicago truncatula HOM05D003601 ORTHO05D004896 2.8e-11 73.2 134 40.3
Medtr8g058593 Medicago truncatula HOM05D003601 ORTHO05D004896 2.8e-11 73.2 134 40.3
Medtr8g058607 Medicago truncatula HOM05D003601 ORTHO05D004896 2.8e-11 73.2 134 40.3
TAR375G0774 Trochodendron aralioides HOM05D003601 ORTHO05D004896 6.3e-11 72.0 65 56.9
CBR_g49220 Chara braunii HOM05D003601 ORTHO05D004896 1.8e-10 70.5 40 75.0
PRCOL_00000030 Prasinoderma coloniale HOM05D003601 ORTHO05D004896 1.0e-08 64.7 92 42.4


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