Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 1.2e-164 583.2 307 100.0
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 6.4e-134 481.1 314 79.0
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 3.5e-132 475.3 305 80.7
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 1.7e-131 473.0 305 80.3
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 7.3e-130 467.6 309 79.9
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 3.6e-105 385.6 316 67.4
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 2.0e-103 379.8 321 66.7
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 2.9e-102 375.9 324 65.4
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 5.3e-96 355.1 308 63.3
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 2.4e-93 346.3 318 61.9
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 6.0e-84 315.1 326 55.8
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 3.1e-80 302.8 320 56.6
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 3.4e-79 299.3 339 53.1
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 3.9e-67 259.2 318 47.2
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 1.3e-62 244.2 343 43.7
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 2.2e-57 226.9 320 44.1
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 6.3e-57 225.3 315 45.1
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 6.9e-56 221.9 322 44.4
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 2.2e-54 216.9 335 41.8
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 1.9e-53 213.8 306 43.5
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 7.2e-53 211.8 331 41.7
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 1.1e-50 204.5 323 41.5
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 7.7e-47 191.8 332 39.8
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 4.0e-43 179.5 336 37.8
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 1.7e-41 174.1 349 36.1
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 3.1e-40 169.9 243 39.5
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 2.0e-39 167.2 242 40.1
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 3.8e-38 162.9 313 35.1
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 5.0e-38 162.5 327 34.9
Gorai.009G412100 Gossypium raimondii HOM05D008196 ORTHO05D010261 9.4e-37 158.3 313 34.5
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 6.3e-33 145.6 195 43.1
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 1.4e-32 144.4 258 37.2
Actinidia31311 Actinidia chinensis HOM05D008196 ORTHO05D010261 7.0e-32 142.1 330 33.3
PSO063G4707 Papaver somniferum HOM05D008196 ORTHO05D010261 3.5e-31 139.8 350 32.3
COL.COLO4_26896 Corchorus olitorius HOM05D008196 ORTHO05D011585 1.0e-30 138.3 312 32.7
TAR633G2803 Trochodendron aralioides HOM05D008196 ORTHO05D010261 3.8e-30 136.3 316 35.1
Dinv37347 Davidia involucrata HOM05D008196 ORTHO05D010261 1.2e-28 131.3 298 37.2
RhsimUnG0068000 Rhododendron simsii HOM05D008196 ORTHO05D010261 2.8e-28 130.2 338 32.2
RhsimUnG0004600 Rhododendron simsii HOM05D008196 ORTHO05D010261 1.4e-27 127.9 336 31.5
HanXRQChr13g0400671 Helianthus annuus HOM05D008196 ORTHO05D010261 3.0e-27 126.7 314 34.1
vmacro08799 Vaccinium macrocarpon HOM05D008196 ORTHO05D010261 4.4e-26 122.9 319 32.0
QL07p041760 Quercus lobata HOM05D008196 ORTHO05D010261 5.7e-26 122.5 142 48.6
CANSAT80G2595 Cannabis sativa HOM05D008196 ORTHO05D010261 7.0e-24 115.5 310 34.5
QL07p041763 Quercus lobata HOM05D008196 ORTHO05D010261 3.3e-21 106.7 158 36.7
PSO339G1434 Papaver somniferum HOM05D008196 ORTHO05D010261 6.1e-20 102.4 299 31.4
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 1.3e-17 94.7 229 32.3
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 8.3e-17 92.0 260 28.5
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 8.3e-17 92.0 260 28.5
ClCG10G019830 Citrullus lanatus HOM05D022817 ORTHO05D010261 5.4e-16 89.4 320 31.6
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 1.2e-15 88.2 204 32.8
CSS0006202 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 1.3e-14 84.7 64 65.6
AagrBONN_evm.TU.Sc2ySwM_344.3461 Anthoceros agrestis HOM05D008196 ORTHO05D010261 2.3e-14 84.0 200 31.5
Nn3g19096 Nelumbo nucifera HOM05D008196 ORTHO05D010261 5.0e-14 82.8 344 28.5
Manes.09G049502 Manihot esculenta HOM05D008196 ORTHO05D010261 6.6e-14 82.4 104 48.1
Sed0013835 Sechium edule HOM05D022817 ORTHO05D010261 4.3e-13 79.7 319 29.5
Sed0000391 Sechium edule HOM05D022817 ORTHO05D010261 9.5e-13 78.6 312 29.8
PGR142G2786 Punica granatum HOM05D008196 ORTHO05D010261 1.0e-11 75.1 313 26.8
Mapoly0028s0074 Marchantia polymorpha HOM05D008196 ORTHO05D010261 1.8e-11 74.3 203 29.1
Cfa021114 Carpinus fangiana HOM05D008196 ORTHO05D010261 7.5e-10 68.9 108 42.6
MELO3C009385.2 Cucumis melo HOM05D022817 ORTHO05D010261 4.9e-09 66.2 71 56.3
CsaV3_3G036270 Cucumis sativus L. HOM05D022817 ORTHO05D010261 4.9e-09 66.2 71 56.3
HPP92_014786 Vanilla planifolia HOM05D008196 ORTHO05D010261 1.9e-08 64.3 170 31.2
Aqoxy2G03022 Aquilegia oxysepala HOM05D003060 ORTHO05D001716 3.2e-08 63.5 111 33.3
ECA233G4339 Erigeron canadensis HOM05D005316 ORTHO05D006495 3.2e-08 63.5 71 53.5
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 3.2e-08 63.5 87 36.8
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 4.1e-08 63.2 193 26.4
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 1.2e-07 61.6 187 26.7
Solyc01g067040.2 Solanum lycopersicum HOM05D003060 ORTHO05D001716 1.6e-07 61.2 69 43.5
Sopen01g028750 Solanum pennellii HOM05D003060 ORTHO05D001716 2.0e-07 60.8 69 43.5
Aqoxy3G02940 Aquilegia oxysepala HOM05D000855 ORTHO05D008469 4.6e-07 59.7 175 26.3
RcHm_v2.0_Chr3g0455351 Rosa chinensis HOM05D003060 ORTHO05D001716 4.6e-07 59.7 172 29.7
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 1.0e-06 58.5 193 26.4
PGSC0003DMG400022663 Solanum tuberosum HOM05D003060 ORTHO05D001716 1.0e-06 58.5 68 42.6
SEGI_22377 Sequoiadendron giganteum HOM05D008196 ORTHO05D010261 1.7e-06 57.8 79 46.8
Aqoxy6G01439 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 8.6e-06 55.5 70 30.0
Sabra05G0032100 Salix brachista HOM05D003060 ORTHO05D001716 8.6e-06 55.5 67 38.8


User provided reference genes

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