Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8675 Trifolium pratense HOM05D000208 ORTHO05D026547 2.4e-63 245.4 125 100.0
Medtr4g066170 Medicago truncatula HOM05D000208 ORTHO05D000130 1.3e-40 169.9 122 73.0
Ca_20585_v3 Cicer arietinum L. HOM05D000208 ORTHO05D000130 3.6e-27 125.2 128 56.2
Psat3g069000 Pisum sativum HOM05D000208 ORTHO05D000130 6.1e-27 124.4 126 59.5
Lj3g0003529 Lotus japonicus HOM05D000208 ORTHO05D000130 1.7e-24 116.3 125 56.0
Psat7g213600 Pisum sativum HOM05D000208 ORTHO05D000130 4.9e-24 114.8 123 55.3
Glyma.11G130300 Glycine max HOM05D000208 ORTHO05D000130 6.4e-24 114.4 127 55.1
Phvul.011G056500 Phaseolus vulgaris HOM05D000208 ORTHO05D000130 8.9e-18 94.0 118 48.3
arahy.Tifrunner.gnm1.ann1.VY5ZYI Arachis hypogaea HOM05D000208 ORTHO05D000130 5.8e-17 91.3 121 50.4
Lalb_Chr03g0026191 Lupinus albus HOM05D000208 ORTHO05D000130 1.3e-16 90.1 134 48.5
Nn2g15594 Nelumbo nucifera HOM05D000208 ORTHO05D000130 5.1e-13 78.2 109 43.1
Sabra01G0010900 Salix brachista HOM05D000208 ORTHO05D000130 6.6e-13 77.8 110 44.5
TWI60G1382 Tripterygium wilfordii HOM05D000208 ORTHO05D000130 7.3e-12 74.3 108 44.4
MBI01_g15759_MAGBIO Magnolia biondii HOM05D000208 ORTHO05D026547 9.5e-12 73.9 120 40.0
Potri.001G015500 Populus trichocarpa HOM05D000208 ORTHO05D000130 1.6e-11 73.2 109 44.0
Sabra01G0010800 Salix brachista HOM05D000208 ORTHO05D000130 2.1e-11 72.8 126 40.5
TAR636G1757 Trochodendron aralioides HOM05D000208 ORTHO05D000130 2.8e-11 72.4 93 43.0
VMungo1127G1681 Vigna mungo HOM05D000208 ORTHO05D000130 2.8e-11 72.4 125 40.8
Ciclev10014199m.g Citrus clementina HOM05D000208 ORTHO05D000130 1.1e-10 70.5 66 54.5
MBI01_g15758_MAGBIO Magnolia biondii HOM05D000208 ORTHO05D000130 1.1e-10 70.5 120 37.5
Potri.001G015400 Populus trichocarpa HOM05D000208 ORTHO05D000130 1.1e-10 70.5 127 40.2
Duzib168G1149 Durio zibethinus HOM05D000208 ORTHO05D000130 1.4e-10 70.1 110 41.8
CANSAT54G2281 Cannabis sativa HOM05D000208 ORTHO05D000130 1.8e-10 69.7 59 55.9
EL10Ac4g10321 Beta vulgaris HOM05D000208 ORTHO05D000130 2.3e-10 69.3 130 33.8
Potri.017G046200 Populus trichocarpa HOM05D000208 ORTHO05D000130 2.3e-10 69.3 108 42.6
QL01p006384 Quercus lobata HOM05D000208 ORTHO05D000130 3.1e-10 68.9 66 56.1
TAR636G0911 Trochodendron aralioides HOM05D000208 ORTHO05D000130 3.1e-10 68.9 118 35.6
TAR636G2143 Trochodendron aralioides HOM05D000208 ORTHO05D000130 5.2e-10 68.2 118 35.6
Glyma.11G130200 Glycine max HOM05D000208 ORTHO05D000130 6.8e-10 67.8 49 65.3
TWI34G1977 Tripterygium wilfordii HOM05D000208 ORTHO05D000130 6.8e-10 67.8 53 60.4
Glyma.12G054700 Glycine max HOM05D000208 ORTHO05D000130 1.5e-09 66.6 49 65.3
Potri.009G022400 Populus trichocarpa HOM05D000208 ORTHO05D000130 1.5e-09 66.6 121 38.0
Thecc.09G223000 Theobroma cacao HOM05D000208 ORTHO05D000130 2.0e-09 66.2 124 38.7
CiPaw.13G165600 Carya illinoinensis HOM05D000208 ORTHO05D000130 2.6e-09 65.9 84 47.6
Dinv36306 Davidia involucrata HOM05D000208 ORTHO05D000130 2.6e-09 65.9 106 39.6
CiPaw.14G125000 Carya illinoinensis HOM05D000208 ORTHO05D000130 3.4e-09 65.5 114 38.6
AUR62019248 Chenopodium quinoa HOM05D000208 ORTHO05D000130 3.4e-09 65.5 125 36.0
QL01p006349 Quercus lobata HOM05D000208 ORTHO05D000130 3.4e-09 65.5 67 50.7
Cfa009690 Carpinus fangiana HOM05D000208 ORTHO05D000130 4.4e-09 65.1 68 54.4
Thecc.09G222800 Theobroma cacao HOM05D000208 ORTHO05D000130 4.4e-09 65.1 112 40.2
MD03G1021200 Malus domestica HOM05D000208 ORTHO05D000130 5.8e-09 64.7 54 53.7
Cfa009692 Carpinus fangiana HOM05D000208 ORTHO05D000130 7.5e-09 64.3 109 39.4
MD11G1023100 Malus domestica HOM05D000208 ORTHO05D000130 7.5e-09 64.3 48 62.5
QL01p006260 Quercus lobata HOM05D000208 ORTHO05D000130 7.5e-09 64.3 81 43.2
CDE10G1301 Ceratophyllum demersum HOM05D000208 ORTHO05D000130 9.9e-09 63.9 67 47.8
Eucgr.J00820 Eucalyptus grandis HOM05D000208 ORTHO05D000130 1.3e-08 63.5 121 36.4
TAR699G0001 Trochodendron aralioides HOM05D000208 ORTHO05D000130 1.3e-08 63.5 50 62.0
QL01p006320 Quercus lobata HOM05D000208 ORTHO05D000130 1.7e-08 63.2 125 37.6
vmacro04168 Vaccinium macrocarpon HOM05D000208 ORTHO05D000130 1.7e-08 63.2 72 48.6
CANSAT54G0389 Cannabis sativa HOM05D000208 ORTHO05D000130 2.9e-08 62.4 53 54.7
COL.COLO4_22622 Corchorus olitorius HOM05D000208 ORTHO05D000130 2.9e-08 62.4 98 41.8
Duzib168G1723 Durio zibethinus HOM05D000208 ORTHO05D000130 2.9e-08 62.4 110 42.7
Manes.10G148800 Manihot esculenta HOM05D000208 ORTHO05D000130 2.9e-08 62.4 112 38.4
RcHm_v2.0_Chr5g0078061 Rosa chinensis HOM05D000208 ORTHO05D000130 2.9e-08 62.4 54 50.0
Atru.chr1.719 Acer truncatum HOM05D000208 ORTHO05D000130 3.7e-08 62.0 109 41.3
MD07G1004600 Malus domestica HOM05D000208 ORTHO05D018403 3.7e-08 62.0 81 45.7
PGR119G2205 Punica granatum HOM05D000208 ORTHO05D000130 4.9e-08 61.6 109 39.4
Atru.chr3.2495 Acer truncatum HOM05D000208 ORTHO05D000130 6.4e-08 61.2 109 41.3
Cfa009687 Carpinus fangiana HOM05D000208 ORTHO05D000130 6.4e-08 61.2 109 39.4
CSS0032783 Camellia sinensis var. sinensis HOM05D000208 ORTHO05D000130 8.3e-08 60.8 77 46.8
Lalb_Chr01g0003271 Lupinus albus HOM05D000208 ORTHO05D000130 8.3e-08 60.8 52 55.8
GSVIVG01025339001 Vitis vinifera HOM05D000208 ORTHO05D000130 8.3e-08 60.8 121 33.9
AUR62000074 Chenopodium quinoa HOM05D000208 ORTHO05D000130 1.1e-07 60.5 98 35.7
Cc01_g04060 Coffea canephora HOM05D000208 ORTHO05D000130 1.1e-07 60.5 107 35.5
CANSAT54G1665 Cannabis sativa HOM05D000208 ORTHO05D000130 1.4e-07 60.1 48 56.2
Eucgr.J00824 Eucalyptus grandis HOM05D000208 ORTHO05D000130 1.4e-07 60.1 50 56.0
Eucgr.L01891 Eucalyptus grandis HOM05D000208 ORTHO05D000130 1.4e-07 60.1 50 56.0
CiPaw.13G166000 Carya illinoinensis HOM05D000208 ORTHO05D000130 1.9e-07 59.7 109 40.4
COL.COLO4_37763 Corchorus olitorius HOM05D000208 ORTHO05D000130 1.9e-07 59.7 98 36.7
Migut.D00556 Erythranthe guttata HOM05D000208 ORTHO05D000130 1.9e-07 59.7 113 31.0
Cfa009691 Carpinus fangiana HOM05D000208 ORTHO05D000130 3.2e-07 58.9 106 40.6
Haze_24433 Corylus avellana HOM05D000208 ORTHO05D000130 3.2e-07 58.9 110 39.1
Gorai.009G071200 Gossypium raimondii HOM05D000208 ORTHO05D000130 3.2e-07 58.9 69 52.2
HanXRQChr02g0056551 Helianthus annuus HOM05D000208 ORTHO05D000130 3.2e-07 58.9 104 35.6
arahy.Tifrunner.gnm1.ann1.Y6Q89P Arachis hypogaea HOM05D000208 ORTHO05D000130 4.1e-07 58.5 46 63.0
Migut.D00557 Erythranthe guttata HOM05D000208 ORTHO05D000130 4.1e-07 58.5 114 33.3
Gohir.D05G070100 Gossypium hirsutum HOM05D000208 ORTHO05D000130 4.1e-07 58.5 69 50.7
Gohir.A05G067300 Gossypium hirsutum HOM05D000208 ORTHO05D000130 5.4e-07 58.2 87 42.5
Lj2C659G1 Lonicera japonica HOM05D000208 ORTHO05D000130 5.4e-07 58.2 73 46.6
MBI01_g26625_MAGBIO Magnolia biondii HOM05D000208 ORTHO05D000130 5.4e-07 58.2 118 35.6
Cfa009686 Carpinus fangiana HOM05D000208 ORTHO05D000130 7.1e-07 57.8 106 39.6
CiPaw.13G165900 Carya illinoinensis HOM05D000208 ORTHO05D000130 7.1e-07 57.8 109 39.4
Cpa.g.sc458.4 Carica papaya HOM05D000208 ORTHO05D000130 9.2e-07 57.4 52 50.0
ECA248G1801 Erigeron canadensis HOM05D000208 ORTHO05D000130 9.2e-07 57.4 111 34.2
Eucgr.J00832 Eucalyptus grandis HOM05D000208 ORTHO05D000130 9.2e-07 57.4 68 48.5
Hma1.2p1_0811F.1_g222200 Hydrangea macrophylla HOM05D000208 ORTHO05D000130 9.2e-07 57.4 67 47.8
PGR119G0213 Punica granatum HOM05D000208 ORTHO05D000130 9.2e-07 57.4 45 62.2
FvH4_3g43540 Fragaria vesca HOM05D000208 ORTHO05D000130 1.2e-06 57.0 54 42.6
FAN11G0477 Fragaria x ananassa HOM05D000208 ORTHO05D000130 1.2e-06 57.0 54 42.6
FAN21G2166 Fragaria x ananassa HOM05D000208 ORTHO05D000130 1.2e-06 57.0 54 42.6
Manes.07G002400 Manihot esculenta HOM05D000208 ORTHO05D000130 1.2e-06 57.0 126 34.9
Thecc.09G222600 Theobroma cacao HOM05D000208 ORTHO05D000130 1.2e-06 57.0 110 38.2
CANSAT54G1151 Cannabis sativa HOM05D000208 ORTHO05D000130 1.6e-06 56.6 105 34.3
AUR62000077 Chenopodium quinoa HOM05D000208 ORTHO05D000130 1.6e-06 56.6 85 42.4
AUR62019249 Chenopodium quinoa HOM05D000208 ORTHO05D000130 2.1e-06 56.2 126 34.1
ECA248G2801 Erigeron canadensis HOM05D000208 ORTHO05D000130 2.7e-06 55.8 111 33.3
FAN16G0143 Fragaria x ananassa HOM05D000208 ORTHO05D000130 3.5e-06 55.5 46 50.0
DCAR_024393 Daucus carota HOM05D000208 ORTHO05D000130 4.6e-06 55.1 126 41.3
Lsat_1_v5_gn_1_66921 Lactuca sativa HOM05D000208 ORTHO05D000130 4.6e-06 55.1 107 34.6
SGA_v2.0_scaffold8G04631 Striga asiatica HOM05D000208 ORTHO05D000130 4.6e-06 55.1 51 47.1
MSTRG.18405 Avicennia marina HOM05D000208 ORTHO05D000130 6.0e-06 54.7 115 33.9
HanXRQChr02g0056771 Helianthus annuus HOM05D000208 ORTHO05D000130 6.0e-06 54.7 48 54.2
Rhsim13G0225600 Rhododendron simsii HOM05D000208 ORTHO05D000130 6.0e-06 54.7 73 45.2
AUR62019247 Chenopodium quinoa HOM05D000208 ORTHO05D000130 7.8e-06 54.3 127 30.7
Eucgr.J00825 Eucalyptus grandis HOM05D000208 ORTHO05D000130 7.8e-06 54.3 120 37.5


User provided reference genes

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