Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G866 Trifolium pratense HOM05D004059 ORTHO05D004591 5.3e-38 160.6 85 100.0
TPR.G13416 Trifolium pratense HOM05D004059 ORTHO05D004591 1.5e-37 159.1 85 98.8
Psat1g140200 Pisum sativum HOM05D004059 ORTHO05D004591 1.4e-30 136.0 85 81.2
Medtr2g039620 Medicago truncatula HOM05D004059 ORTHO05D004591 1.1e-27 126.3 85 78.8
Glyma.15G170500 Glycine max HOM05D004059 ORTHO05D004591 2.7e-18 95.1 85 62.4
Glyma.09G064200 Glycine max HOM05D004059 ORTHO05D004591 3.0e-17 91.7 85 61.2
VMungo1309G0851 Vigna mungo HOM05D004059 ORTHO05D004591 3.0e-17 91.7 85 61.2
Phvul.009G231600 Phaseolus vulgaris HOM05D004059 ORTHO05D004591 4.3e-16 87.8 85 60.0
Lj6g0002908 Lotus japonicus HOM05D004059 ORTHO05D004591 7.4e-16 87.0 85 63.5
Lalb_Chr08g0232291 Lupinus albus HOM05D004059 ORTHO05D004591 9.7e-16 86.7 85 60.0
Lalb_Chr11g0074551 Lupinus albus HOM05D004059 ORTHO05D004591 3.4e-13 78.2 85 54.1
Glyma.17G054000 Glycine max HOM05D004059 ORTHO05D004591 4.5e-13 77.8 85 55.3
arahy.Tifrunner.gnm1.ann1.H4FASW Arachis hypogaea HOM05D004059 ORTHO05D004591 1.4e-11 72.8 86 57.0
Lj4g0028074 Lotus japonicus HOM05D004059 ORTHO05D004591 5.5e-11 70.9 85 56.5
VMungo1215G3226 Vigna mungo HOM05D004059 ORTHO05D004591 2.1e-10 68.9 83 49.4
arahy.Tifrunner.gnm1.ann1.MX4JUX Arachis hypogaea HOM05D004059 ORTHO05D004591 6.1e-10 67.4 89 50.6
VMungo1215G0279 Vigna mungo HOM05D004059 ORTHO05D004591 7.9e-10 67.0 83 47.0
Cfa003070 Carpinus fangiana HOM05D004059 ORTHO05D004591 1.8e-09 65.9 83 50.6
Carub.0008s1744 Capsella rubella HOM05D004059 ORTHO05D004591 5.1e-09 64.3 84 47.6
QL02p062365 Quercus lobata HOM05D004059 ORTHO05D004591 1.9e-08 62.4 83 53.0
Gohir.A05G030300 Gossypium hirsutum HOM05D004059 ORTHO05D004591 7.4e-08 60.5 83 47.0
Gorai.009G031900 Gossypium raimondii HOM05D004059 ORTHO05D004591 7.4e-08 60.5 83 47.0
CiPaw.03G214200 Carya illinoinensis HOM05D004059 ORTHO05D004591 1.3e-07 59.7 83 51.8
Manes.16G101000 Manihot esculenta HOM05D004059 ORTHO05D004591 1.3e-07 59.7 83 44.6
AT5G56960 Arabidopsis thaliana HOM05D004059 ORTHO05D004591 2.8e-07 58.5 82 47.6
Duzib187G0197 Durio zibethinus HOM05D004059 ORTHO05D004591 2.8e-07 58.5 83 47.0
TWI34G0199 Tripterygium wilfordii HOM05D004059 ORTHO05D004591 2.8e-07 58.5 61 52.5
Gohir.D05G031700 Gossypium hirsutum HOM05D004059 ORTHO05D004591 3.7e-07 58.2 83 45.8
MD02G1081600 Malus domestica HOM05D004059 ORTHO05D004591 3.7e-07 58.2 87 42.5
Sp6g18670 Schrenkiella parvula HOM05D004059 ORTHO05D004591 3.7e-07 58.2 82 42.7
CSS0003764 Camellia sinensis var. sinensis HOM05D004059 ORTHO05D004591 8.2e-07 57.0 83 44.6
Hma1.2p1_1838F.1_g304870 Hydrangea macrophylla HOM05D004059 ORTHO05D004591 8.2e-07 57.0 84 44.0
Haze_25925 Corylus avellana HOM05D004059 ORTHO05D004591 1.4e-06 56.2 76 47.4
MD15G1208900 Malus domestica HOM05D004059 ORTHO05D004591 1.4e-06 56.2 86 41.9
Actinidia29906 Actinidia chinensis HOM05D004059 ORTHO05D004591 1.8e-06 55.8 82 45.1
CSS0005796 Camellia sinensis var. sinensis HOM05D004059 ORTHO05D004591 1.8e-06 55.8 83 39.8
CANSAT56G2242 Cannabis sativa HOM05D004059 ORTHO05D004591 1.8e-06 55.8 88 40.9
BcaC03g14194 Brassica carinata HOM05D004059 ORTHO05D004591 2.4e-06 55.5 83 39.8
C02p14760 Brassica napus HOM05D004059 ORTHO05D004591 2.4e-06 55.5 83 39.8
BolC2t07605H Brassica oleracea HOM05D004059 ORTHO05D004591 2.4e-06 55.5 83 39.8
Dinv36776 Davidia involucrata HOM05D004059 ORTHO05D004591 2.4e-06 55.5 83 41.0
Gorai.010G083900 Gossypium raimondii HOM05D004059 ORTHO05D004591 2.4e-06 55.5 83 42.2
Gorai.001G012400 Gossypium raimondii HOM05D004059 ORTHO05D004591 3.1e-06 55.1 82 43.9
Hund25946 Selenicereus undatus HOM05D004059 ORTHO05D004591 3.1e-06 55.1 87 41.4
vmacro06298 Vaccinium macrocarpon HOM05D004059 ORTHO05D004591 3.1e-06 55.1 83 39.8
A02p08850 Brassica napus HOM05D004059 ORTHO05D004591 4.1e-06 54.7 83 38.6
Gohir.A07G011900 Gossypium hirsutum HOM05D004059 ORTHO05D004591 4.1e-06 54.7 82 42.7
Gohir.D06G071950 Gossypium hirsutum HOM05D004059 ORTHO05D004591 4.1e-06 54.7 83 42.2
Nitab4.5_0006053g0020 Nicotiana tabacum HOM05D004059 ORTHO05D004591 4.1e-06 54.7 81 46.9
Peaxi162Scf00028g00036 Petunia axillaris HOM05D004059 ORTHO05D004591 4.1e-06 54.7 79 45.6
Duzib168G0233 Durio zibethinus HOM05D004059 ORTHO05D004591 5.3e-06 54.3 83 45.8
Prupe.7G207500 Prunus persica HOM05D004059 ORTHO05D004591 5.3e-06 54.3 86 39.5
BcaB05g22300 Brassica carinata HOM05D004059 ORTHO05D004591 6.9e-06 53.9 80 41.2
COL.COLO4_18190 Corchorus olitorius HOM05D004059 ORTHO05D004591 6.9e-06 53.9 81 45.7
Gohir.D07G011700 Gossypium hirsutum HOM05D004059 ORTHO05D004591 6.9e-06 53.9 82 42.7
Manes.03G034700 Manihot esculenta HOM05D004059 ORTHO05D004591 6.9e-06 53.9 83 41.0
BraA02t05954Z Brassica rapa HOM05D004059 ORTHO05D004591 9.1e-06 53.5 83 38.6
Thecc.09G087400 Theobroma cacao HOM05D004059 ORTHO05D004591 9.1e-06 53.5 83 47.0


User provided reference genes

Program Settings