Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 1.1e-173 613.2 316 100.0
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 2.1e-164 582.4 316 93.7
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 1.4e-163 579.7 316 93.4
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.7e-153 546.2 314 89.8
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 3.7e-153 545.0 315 89.2
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 2.2e-150 535.8 318 86.8
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 1.1e-149 533.5 315 86.3
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 1.9e-149 532.7 303 88.4
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.1e-144 516.9 315 83.2
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 2.7e-140 502.3 316 79.7
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 2.3e-139 499.2 316 79.1
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 8.8e-139 497.3 314 78.3
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 2.6e-138 495.7 314 83.1
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 1.3e-137 493.4 316 77.8
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 1.7e-137 493.0 358 73.2
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 2.2e-137 492.7 316 78.5
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 4.1e-136 488.4 313 77.0
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 7.0e-136 487.6 313 76.4
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.0e-135 486.1 313 76.7
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 2.0e-135 486.1 316 76.9
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 3.5e-135 485.3 313 76.0
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 4.5e-135 485.0 315 75.6
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 7.7e-135 484.2 316 74.7
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 1.0e-134 483.8 316 77.5
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 2.2e-134 482.6 314 75.8
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 2.9e-134 482.3 314 75.5
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 2.9e-134 482.3 316 76.9
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 9.4e-133 477.2 316 73.7
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 8.0e-132 474.2 312 76.6
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 1.4e-131 473.4 322 73.6
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 2.3e-131 472.6 317 73.5
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 4.0e-131 471.9 315 72.4
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 5.2e-131 471.5 318 75.2
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 8.8e-131 470.7 314 73.9
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 2.6e-130 469.2 316 75.6
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 2.8e-129 465.7 319 73.4
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 1.1e-128 463.8 315 74.0
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 1.4e-128 463.4 316 74.1
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.8e-128 463.0 319 73.4
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 2.4e-128 462.6 316 74.1
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 3.1e-128 462.2 314 73.9
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 5.4e-128 461.5 316 72.8
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 2.0e-127 459.5 315 76.8
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 2.0e-127 459.5 315 71.7
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 2.7e-127 459.1 318 73.6
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 3.5e-127 458.8 315 72.7
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 3.5e-127 458.8 316 72.8
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 4.5e-127 458.4 303 76.2
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 5.9e-127 458.0 315 72.1
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 7.7e-127 457.6 315 72.1
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 7.7e-127 457.6 315 72.1
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 7.7e-127 457.6 315 71.1
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 1.0e-126 457.2 315 71.7
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 1.0e-126 457.2 315 72.1
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 2.3e-126 456.1 315 72.1
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 5.0e-126 454.9 317 72.2
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 5.0e-126 454.9 315 71.4
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.1e-125 453.8 306 72.2
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 1.9e-125 453.0 316 70.6
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 3.3e-125 452.2 306 71.6
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 5.5e-125 451.4 303 74.9
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 1.2e-124 450.3 322 70.5
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 1.6e-124 449.9 321 70.4
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 6.1e-124 448.0 307 71.7
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.4e-123 446.8 268 86.6
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.4e-123 446.8 268 86.6
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 2.0e-122 443.0 336 72.0
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.3e-121 440.3 295 74.6
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.7e-121 439.9 335 67.5
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 2.2e-121 439.5 304 71.7
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 6.3e-121 438.0 309 70.6
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 2.4e-120 436.0 316 70.9
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 3.2e-120 435.6 312 68.3
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 5.4e-120 434.9 310 70.6
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 4.3e-117 425.2 317 67.2
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 4.7e-116 421.8 314 66.6
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 1.0e-115 420.6 301 68.1
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 3.1e-115 419.1 316 67.1
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 1.3e-113 413.7 314 68.8
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.7e-113 413.3 316 69.0
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.9e-113 411.8 306 68.0
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 1.9e-112 409.8 269 76.6
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 6.6e-110 401.4 289 71.6
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 2.5e-109 399.4 298 69.5
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 1.2e-103 380.6 314 65.6
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 2.8e-100 369.4 254 74.0
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 3.6e-100 369.0 315 61.3
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 6.4e-97 358.2 245 73.5
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 4.4e-90 335.5 322 52.2
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 7.6e-90 334.7 232 70.7
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.3e-86 323.9 315 49.2
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 8.7e-86 321.2 256 67.2
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 9.6e-85 317.8 207 76.8
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 2.4e-83 313.2 178 87.1
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 1.2e-82 310.8 317 52.7
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 9.9e-82 307.8 313 47.9
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 8.4e-81 304.7 313 47.9
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 4.3e-77 292.4 216 68.5
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 1.1e-75 287.7 193 72.0
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 4.3e-69 265.8 232 59.1
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.8e-68 263.1 311 41.8
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 3.7e-68 262.7 330 48.8
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 3.1e-67 259.6 268 51.5
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 1.4e-59 234.2 339 40.4
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 4.6e-55 219.2 146 71.2
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 2.0e-45 187.2 127 68.5
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 2.8e-44 183.3 130 66.9
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 3.7e-44 183.0 228 48.7
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 1.1e-35 154.8 103 77.7
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 1.7e-33 147.5 246 39.0
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 2.2e-25 120.6 88 64.8
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.9e-25 120.2 93 64.5
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 6.8e-22 109.0 212 36.3
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 8.8e-22 108.6 70 75.7
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 4.1e-11 73.2 72 48.6
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 1.4e-06 58.2 44 56.8
Lj5g0003691 Lotus japonicus HOM05D006919 ORTHO05D236465 1.4e-06 58.2 36 80.6


User provided reference genes

Program Settings