Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8623 Trifolium pratense HOM05D001858 ORTHO05D001838 7.5e-98 360.5 185 100.0
Psat1g030280 Pisum sativum HOM05D001858 ORTHO05D001838 1.2e-50 203.8 187 59.9
Medtr6g069860 Medicago truncatula HOM05D001858 ORTHO05D001838 4.6e-47 191.8 218 50.0
Lj2g0017697 Lotus japonicus HOM05D001858 ORTHO05D001838 1.9e-40 169.9 187 52.9
Glyma.09G174300 Glycine max HOM05D001858 ORTHO05D001838 4.6e-39 165.2 183 49.2
Phvul.004G149600 Phaseolus vulgaris HOM05D001858 ORTHO05D001838 6.7e-38 161.4 189 51.3
Glyma.07G103300 Glycine max HOM05D001858 ORTHO05D001838 2.6e-37 159.5 183 51.4
VMungo0464G0752 Vigna mungo HOM05D001858 ORTHO05D001838 3.1e-35 152.5 189 49.2
Lalb_Chr24g0398151 Lupinus albus HOM05D001858 ORTHO05D001838 5.2e-30 135.2 182 47.8
Lalb_Chr14g0370631 Lupinus albus HOM05D001858 ORTHO05D001838 2.0e-29 133.3 186 44.6
Dinv09298 Davidia involucrata HOM05D001858 ORTHO05D001838 2.4e-19 99.8 185 36.2
Sed0011794 Sechium edule HOM05D001858 ORTHO05D001838 2.4e-19 99.8 181 36.5
Sed0019297 Sechium edule HOM05D001858 ORTHO05D001838 2.0e-18 96.7 179 39.1
arahy.Tifrunner.gnm1.ann1.IMEV7C Arachis hypogaea HOM05D001858 ORTHO05D001838 1.3e-17 94.0 182 38.5
arahy.Tifrunner.gnm1.ann1.R4XYVX Arachis hypogaea HOM05D001858 ORTHO05D001838 1.3e-17 94.0 182 38.5
Haze_27720 Corylus avellana HOM05D001858 ORTHO05D001838 1.1e-16 90.9 116 39.7
THA.LOC104812172 Tarenaya hassleriana HOM05D001858 ORTHO05D001838 1.5e-16 90.5 125 38.4
THA.LOC104813928 Tarenaya hassleriana HOM05D001858 ORTHO05D001838 1.2e-15 87.4 90 45.6
Prupe.5G235000 Prunus persica HOM05D001858 ORTHO05D001838 1.6e-15 87.0 186 32.3
RcHm_v2.0_Chr7g0178151 Rosa chinensis HOM05D001858 ORTHO05D001838 2.1e-15 86.7 163 36.8
Haze_18887 Corylus avellana HOM05D001858 ORTHO05D001838 4.7e-15 85.5 138 37.0
Thecc.03G059100 Theobroma cacao HOM05D001858 ORTHO05D001838 6.1e-15 85.1 137 36.5
Oeu024311.1 Olea europaea HOM05D001858 ORTHO05D001838 8.0e-15 84.7 133 38.3
AL2G33310 Arabidopsis lyrata HOM05D001858 ORTHO05D001838 1.0e-14 84.3 89 48.3
C06p33980 Brassica napus HOM05D001858 ORTHO05D001838 1.0e-14 84.3 97 44.3
BolC6t38512H Brassica oleracea HOM05D001858 ORTHO05D001838 1.0e-14 84.3 97 44.3
ClCG04G010550 Citrullus lanatus HOM05D001858 ORTHO05D001838 2.3e-14 83.2 150 38.7
FAN13G2653 Fragaria x ananassa HOM05D001858 ORTHO05D001838 3.0e-14 82.8 161 33.5
MD06G1228500 Malus domestica HOM05D001858 ORTHO05D001838 3.0e-14 82.8 176 33.5
Aqoxy1G00383 Aquilegia oxysepala HOM05D001858 ORTHO05D001838 4.0e-14 82.4 83 48.2
A08p30480 Brassica napus HOM05D001858 ORTHO05D001838 4.0e-14 82.4 113 43.4
C08p18490 Brassica napus HOM05D001858 ORTHO05D001838 4.0e-14 82.4 165 36.4
BraA08t34980Z Brassica rapa HOM05D001858 ORTHO05D001838 4.0e-14 82.4 113 43.4
FvH4_5g17510 Fragaria vesca HOM05D001858 ORTHO05D001838 4.0e-14 82.4 152 34.9
Aa31LG7G2810 Aethionema arabicum HOM05D001858 ORTHO05D001838 5.2e-14 82.0 88 45.5
Duzib068G1400 Durio zibethinus HOM05D001858 ORTHO05D001838 5.2e-14 82.0 107 43.0
Atru.chr9.1668 Acer truncatum HOM05D001858 ORTHO05D001838 8.8e-14 81.3 135 37.0
BcaC07g38899 Brassica carinata HOM05D001858 ORTHO05D001838 8.8e-14 81.3 140 40.0
BolC8t49481H Brassica oleracea HOM05D001858 ORTHO05D001838 8.8e-14 81.3 140 40.0
Sabra15G0029700 Salix brachista HOM05D001858 ORTHO05D001838 8.8e-14 81.3 173 32.4
AL1G30660 Arabidopsis lyrata HOM05D001858 ORTHO05D001838 1.2e-13 80.9 83 45.8
AT1G18280 Arabidopsis thaliana HOM05D001858 ORTHO05D001838 1.2e-13 80.9 83 45.8
AT1G73560 Arabidopsis thaliana HOM05D001858 ORTHO05D001838 1.5e-13 80.5 89 48.3
BcaC08g46776 Brassica carinata HOM05D001858 ORTHO05D001838 1.5e-13 80.5 78 50.0
A07p39450 Brassica napus HOM05D001858 ORTHO05D001838 1.5e-13 80.5 94 44.7
BraA07t31494Z Brassica rapa HOM05D001858 ORTHO05D001838 1.5e-13 80.5 94 44.7
Cfa019635 Carpinus fangiana HOM05D001858 ORTHO05D001838 1.5e-13 80.5 185 31.4
FAN08G3598 Fragaria x ananassa HOM05D001858 ORTHO05D001838 1.5e-13 80.5 152 34.2
CSS0005696 Camellia sinensis var. sinensis HOM05D001858 ORTHO05D001838 2.0e-13 80.1 137 32.8
FAN18G4182 Fragaria x ananassa HOM05D001858 ORTHO05D001838 2.0e-13 80.1 152 34.2
Nn5g27957 Nelumbo nucifera HOM05D001858 ORTHO05D001838 2.6e-13 79.7 142 35.9
Sp5g28720 Schrenkiella parvula HOM05D001858 ORTHO05D001838 2.6e-13 79.7 91 44.0
Aa31LG4G3760 Aethionema arabicum HOM05D001858 ORTHO05D001838 3.4e-13 79.3 131 39.7
BcaB03g15718 Brassica carinata HOM05D001858 ORTHO05D001838 3.4e-13 79.3 91 42.9
Nn4g24296 Nelumbo nucifera HOM05D001858 ORTHO05D001838 3.4e-13 79.3 118 36.4
Carub.0002s2030 Capsella rubella HOM05D001858 ORTHO05D001838 4.4e-13 79.0 89 46.1
BcaC08g45637 Brassica carinata HOM05D001858 ORTHO05D001838 5.7e-13 78.6 97 42.3
MELO3C002141.2 Cucumis melo HOM05D001858 ORTHO05D001838 5.7e-13 78.6 85 47.1
Thhalv10019626m.g Eutrema salsugineum HOM05D001858 ORTHO05D001838 5.7e-13 78.6 81 43.2
AT1G73550 Arabidopsis thaliana HOM05D001858 ORTHO05D001838 7.5e-13 78.2 123 35.8
A07p29770 Brassica napus HOM05D001858 ORTHO05D001838 9.8e-13 77.8 84 44.0
BolC6t39805H Brassica oleracea HOM05D001858 ORTHO05D001838 9.8e-13 77.8 95 44.2
BraA07t30615Z Brassica rapa HOM05D001858 ORTHO05D000124 9.8e-13 77.8 84 44.0
PGR083G1638 Punica granatum HOM05D001858 ORTHO05D001838 9.8e-13 77.8 73 49.3
TWI15G0199 Tripterygium wilfordii HOM05D001858 ORTHO05D001838 9.8e-13 77.8 138 33.3
TAR622G1257 Trochodendron aralioides HOM05D001858 ORTHO05D001838 9.8e-13 77.8 84 46.4
Nn3g18320 Nelumbo nucifera HOM05D001858 ORTHO05D001838 1.3e-12 77.4 80 40.0
CiPaw.15G144700 Carya illinoinensis HOM05D001858 ORTHO05D001838 1.7e-12 77.0 137 35.0
Potri.015G036201 Populus trichocarpa HOM05D001858 ORTHO05D001838 1.7e-12 77.0 181 35.4
A06p14300 Brassica napus HOM05D001858 ORTHO05D001838 2.2e-12 76.6 86 44.2
BraA06t24559Z Brassica rapa HOM05D001858 ORTHO05D001838 2.2e-12 76.6 86 44.2
MD14G1237700 Malus domestica HOM05D001858 ORTHO05D001838 2.2e-12 76.6 185 33.0
AL2G33300 Arabidopsis lyrata HOM05D001858 ORTHO05D001838 2.8e-12 76.3 136 34.6
BcaB03g12971 Brassica carinata HOM05D001858 ORTHO05D001838 3.7e-12 75.9 90 44.4
BcaC05g25722 Brassica carinata HOM05D001858 ORTHO05D001838 3.7e-12 75.9 106 41.5
BcaNung05438 Brassica carinata HOM05D001858 ORTHO05D001838 3.7e-12 75.9 90 44.4
C05p16560 Brassica napus HOM05D001858 ORTHO05D001838 3.7e-12 75.9 106 41.5
BolC5t30353H Brassica oleracea HOM05D001858 ORTHO05D001838 3.7e-12 75.9 106 41.5
TWI60G0794 Tripterygium wilfordii HOM05D001858 ORTHO05D001838 3.7e-12 75.9 88 39.8
C02p31180 Brassica napus HOM05D001858 ORTHO05D001838 8.3e-12 74.7 103 34.0
FAN16G2664 Fragaria x ananassa HOM05D001858 ORTHO05D001838 8.3e-12 74.7 141 34.8
PSO478G3783 Papaver somniferum HOM05D001858 ORTHO05D001838 8.3e-12 74.7 180 31.1
PGR042G3218 Punica granatum HOM05D001858 ORTHO05D001838 1.1e-11 74.3 111 39.6
DCAR_015011 Daucus carota HOM05D001858 ORTHO05D001838 1.4e-11 73.9 113 41.6
Carub.0002s2029 Capsella rubella HOM05D001858 ORTHO05D001838 2.4e-11 73.2 103 40.8
CARHR018840 Cardamine hirsuta HOM05D001858 ORTHO05D001838 2.4e-11 73.2 91 42.9
Thhalv10019793m.g Eutrema salsugineum HOM05D001858 ORTHO05D001838 2.4e-11 73.2 84 40.5
Nitab4.5_0010189g0010 Nicotiana tabacum HOM05D001858 ORTHO05D001838 2.4e-11 73.2 102 42.2
CARHR066570 Cardamine hirsuta HOM05D001858 ORTHO05D001838 3.1e-11 72.8 106 34.9
CARHR066580 Cardamine hirsuta HOM05D001858 ORTHO05D001838 3.1e-11 72.8 88 43.2
BolC2t09161H Brassica oleracea HOM05D001858 ORTHO05D001838 4.1e-11 72.4 87 35.6
AUR62027274 Chenopodium quinoa HOM05D001858 ORTHO05D001838 4.1e-11 72.4 136 31.6
CsaV3_1G007240 Cucumis sativus L. HOM05D001858 ORTHO05D001838 4.1e-11 72.4 133 34.6
TWI81G0445 Tripterygium wilfordii HOM05D001858 ORTHO05D001838 4.1e-11 72.4 103 36.9
A02p18770 Brassica napus HOM05D001858 ORTHO05D001838 5.4e-11 72.0 103 33.0
BraA02t06920Z Brassica rapa HOM05D001858 ORTHO05D001838 5.4e-11 72.0 103 33.0
Manes.06G004400 Manihot esculenta HOM05D001858 ORTHO05D001838 5.4e-11 72.0 87 41.4
FvH4_3g18850 Fragaria vesca HOM05D001858 ORTHO05D001838 7.0e-11 71.6 141 34.0
FAN11G0461 Fragaria x ananassa HOM05D001858 ORTHO05D001838 7.0e-11 71.6 141 34.0
Nitab4.5_0002046g0010 Nicotiana tabacum HOM05D001858 ORTHO05D001838 7.0e-11 71.6 146 34.2
MBI12_g42600_MAGBIO Magnolia biondii HOM05D000273 ORTHO05D022226 9.1e-11 71.2 94 37.2
Cpa.g.sc29.112 Carica papaya HOM05D001858 ORTHO05D001838 1.2e-10 70.9 93 40.9
QL12p014213 Quercus lobata HOM05D001858 ORTHO05D001838 1.6e-10 70.5 89 43.8
Sp1g16250 Schrenkiella parvula HOM05D001858 ORTHO05D001838 1.6e-10 70.5 84 42.9
Sp5g28710 Schrenkiella parvula HOM05D001858 ORTHO05D001838 1.6e-10 70.5 72 40.3
MELO3C013976.2 Cucumis melo HOM05D001858 ORTHO05D001838 2.0e-10 70.1 90 41.1
MBI12_g01826_MAGBIO Magnolia biondii HOM05D000273 ORTHO05D022226 2.7e-10 69.7 132 33.3
Carub.0001s1790 Capsella rubella HOM05D001858 ORTHO05D001838 3.5e-10 69.3 91 42.9
Duzib084G1282 Durio zibethinus HOM05D001858 ORTHO05D001838 3.5e-10 69.3 113 37.2
Lsat_1_v5_gn_6_2261 Lactuca sativa HOM05D001858 ORTHO05D001838 3.5e-10 69.3 96 37.5
Peaxi162Scf00131g00142 Petunia axillaris HOM05D001858 ORTHO05D001838 3.5e-10 69.3 150 34.0
Sed0003966 Sechium edule HOM05D001858 ORTHO05D001838 3.5e-10 69.3 90 37.8
ECA233G2544 Erigeron canadensis HOM05D001858 ORTHO05D001838 5.9e-10 68.6 91 38.5
Cfa019634 Carpinus fangiana HOM05D001858 ORTHO05D001838 7.7e-10 68.2 55 50.9
AUR62027276 Chenopodium quinoa HOM05D001858 ORTHO05D001838 7.7e-10 68.2 92 41.3
MD06G1064500 Malus domestica HOM05D001858 ORTHO05D001838 7.7e-10 68.2 99 40.4
Rhsim10G0211900 Rhododendron simsii HOM05D001858 ORTHO05D001838 7.7e-10 68.2 105 36.2
Solyc03g118580.3 Solanum lycopersicum HOM05D001858 ORTHO05D001838 7.7e-10 68.2 174 31.0
Gohir.A08G172900 Gossypium hirsutum HOM05D001858 ORTHO05D001838 1.0e-09 67.8 89 43.8
Gohir.A12G220350 Gossypium hirsutum HOM05D001858 ORTHO05D001838 1.0e-09 67.8 89 41.6
Gohir.D08G191700 Gossypium hirsutum HOM05D001858 ORTHO05D001838 1.0e-09 67.8 89 43.8
Gorai.004G201700 Gossypium raimondii HOM05D001858 ORTHO05D001838 1.0e-09 67.8 89 43.8
Nitab4.5_0001264g0090 Nicotiana tabacum HOM05D001858 ORTHO05D001838 1.0e-09 67.8 193 31.6
AUR62007456 Chenopodium quinoa HOM05D001858 ORTHO05D001838 1.3e-09 67.4 91 40.7
CsaV3_3G003100 Cucumis sativus L. HOM05D001858 ORTHO05D001838 1.3e-09 67.4 90 41.1
Migut.D01310 Erythranthe guttata HOM05D001858 ORTHO05D001838 1.3e-09 67.4 134 35.1
Gohir.D03G160100 Gossypium hirsutum HOM05D001858 ORTHO05D001838 1.3e-09 67.4 89 44.9
Gorai.003G168600 Gossypium raimondii HOM05D001858 ORTHO05D001838 1.3e-09 67.4 89 44.9
Peaxi162Scf00314g00327 Petunia axillaris HOM05D001858 ORTHO05D001838 1.3e-09 67.4 150 32.7
Duzib068G0912 Durio zibethinus HOM05D001858 ORTHO05D001838 1.7e-09 67.0 95 42.1
Duzib205G0294 Durio zibethinus HOM05D001858 ORTHO05D001838 1.7e-09 67.0 106 40.6
Duzib205G1498 Durio zibethinus HOM05D001858 ORTHO05D001838 1.7e-09 67.0 106 40.6
Lalb_Chr16g0389531 Lupinus albus HOM05D001858 ORTHO05D001838 1.7e-09 67.0 102 37.3
RcHm_v2.0_Chr5g0031711 Rosa chinensis HOM05D001858 ORTHO05D001838 1.7e-09 67.0 124 35.5
Sc12g0008010 Simmondsia chinensis HOM05D001858 ORTHO05D001838 1.7e-09 67.0 98 38.8
CAN.G843.45 Capsicum annuum HOM05D001858 ORTHO05D001838 2.3e-09 66.6 74 41.9
ClCG10G003060 Citrullus lanatus HOM05D001858 ORTHO05D001838 2.3e-09 66.6 91 39.6
HanXRQChr02g0049661 Helianthus annuus HOM05D001858 ORTHO05D001838 2.3e-09 66.6 109 34.9
Zm00001eb273530 Zea mays HOM05D001858 ORTHO05D001838 2.3e-09 66.6 102 36.3
PGR044G0327 Punica granatum HOM05D001858 ORTHO05D001838 3.8e-09 65.9 87 35.6
Thecc.03G259300 Theobroma cacao HOM05D001858 ORTHO05D001838 3.8e-09 65.9 120 38.3
BolC8t51896H Brassica oleracea HOM05D001858 ORTHO05D001838 5.0e-09 65.5 91 36.3
Thhalv10008878m.g Eutrema salsugineum HOM05D001858 ORTHO05D001838 5.0e-09 65.5 91 40.7
MBI19_g01033_MAGBIO Magnolia biondii HOM05D001858 ORTHO05D001838 5.0e-09 65.5 101 38.6
BcaC07g41338 Brassica carinata HOM05D001858 ORTHO05D001838 6.5e-09 65.1 91 36.3
COL.COLO4_28890 Corchorus olitorius HOM05D001858 ORTHO05D001838 8.6e-09 64.7 107 35.5
BcaC07g41337 Brassica carinata HOM05D001858 ORTHO05D001838 1.1e-08 64.3 91 36.3
Sopen03g037530 Solanum pennellii HOM05D001858 ORTHO05D001838 1.1e-08 64.3 149 29.5
BolC8t51894H Brassica oleracea HOM05D001858 ORTHO05D001838 1.5e-08 63.9 91 35.2
Gohir.A03G014300 Gossypium hirsutum HOM05D001858 ORTHO05D001838 1.5e-08 63.9 89 43.8
Peaxi162Scf00051g00001 Petunia axillaris HOM05D001858 ORTHO05D001838 1.5e-08 63.9 77 39.0
QL10p030872 Quercus lobata HOM05D001858 ORTHO05D001838 1.5e-08 63.9 140 32.1
PGSC0003DMG400031724 Solanum tuberosum HOM05D001858 ORTHO05D001838 1.5e-08 63.9 74 40.5
Dinv21585 Davidia involucrata HOM05D001858 ORTHO05D001838 1.9e-08 63.5 99 38.4
Sabra01G0091900 Salix brachista HOM05D001858 ORTHO05D001838 1.9e-08 63.5 95 35.8
A09p60010 Brassica napus HOM05D001858 ORTHO05D001838 2.5e-08 63.2 91 35.2
A09p60020 Brassica napus HOM05D001858 ORTHO05D001838 2.5e-08 63.2 93 38.7
A09p60030 Brassica napus HOM05D001858 ORTHO05D001838 2.5e-08 63.2 91 35.2
C08p43460 Brassica napus HOM05D001858 ORTHO05D001838 2.5e-08 63.2 91 35.2
C08p43500 Brassica napus HOM05D001858 ORTHO05D001838 2.5e-08 63.2 91 35.2
BraA09t41371Z Brassica rapa HOM05D001858 ORTHO05D001838 2.5e-08 63.2 91 35.2
BraA09t41373Z Brassica rapa HOM05D001858 ORTHO05D001838 2.5e-08 63.2 91 35.2
CiPaw.11G149500 Carya illinoinensis HOM05D001858 ORTHO05D001838 2.5e-08 63.2 108 34.3
MBI04_g47312_MAGBIO Magnolia biondii HOM05D001858 ORTHO05D001838 2.5e-08 63.2 91 36.3
Eucgr.D02016 Eucalyptus grandis HOM05D001858 ORTHO05D001838 5.5e-08 62.0 106 33.0
MBI04_g44361_MAGBIO Magnolia biondii HOM05D001858 ORTHO05D001838 5.5e-08 62.0 98 35.7
QL10p030735 Quercus lobata HOM05D001858 ORTHO05D001838 5.5e-08 62.0 145 31.0
Prupe.5G077100 Prunus persica HOM05D001858 ORTHO05D001838 9.5e-08 61.2 105 36.2
HanXRQChr13g0393201 Helianthus annuus HOM05D001858 ORTHO05D001838 1.2e-07 60.8 103 32.0
PGSC0003DMG400005678 Solanum tuberosum HOM05D001858 ORTHO05D001838 1.2e-07 60.8 134 30.6
TWI32G1069 Tripterygium wilfordii HOM05D008047 ORTHO05D009832 1.2e-07 60.8 103 35.9
Gorai.007G021100 Gossypium raimondii HOM05D001858 ORTHO05D001838 1.6e-07 60.5 118 34.7
PGSC0003DMG400004782 Solanum tuberosum HOM05D001858 ORTHO05D001838 1.6e-07 60.5 90 35.6
Peaxi162Scf63006g00001 Petunia axillaris HOM05D001858 ORTHO05D001838 2.1e-07 60.1 74 36.5
Potri.001G119000 Populus trichocarpa HOM05D001858 ORTHO05D001838 2.1e-07 60.1 101 33.7
QL10p030769 Quercus lobata HOM05D001858 ORTHO05D001838 2.1e-07 60.1 140 30.7
COL.COLO4_23894 Corchorus olitorius HOM05D001858 ORTHO05D001838 2.8e-07 59.7 94 37.2
C08p43490 Brassica napus HOM05D001858 ORTHO05D001838 3.6e-07 59.3 122 32.8
Lj2P210T45 Lonicera japonica HOM05D001858 ORTHO05D001838 6.1e-07 58.5 84 34.5
ClCG05G012510 Citrullus lanatus HOM05D008047 ORTHO05D009832 1.0e-06 57.8 89 37.1
Aa31LG11G15460 Aethionema arabicum HOM05D008047 ORTHO05D009832 2.3e-06 56.6 126 29.4
Nitab4.5_0003120g0010 Nicotiana tabacum HOM05D008047 ORTHO05D009832 3.0e-06 56.2 98 34.7
MBI04_g15075_MAGBIO Magnolia biondii HOM05D000489 ORTHO05D009832 4.0e-06 55.8 85 35.3
MBI04_g47855_MAGBIO Magnolia biondii HOM05D000489 ORTHO05D009832 4.0e-06 55.8 85 35.3
Gohir.D12G222650 Gossypium hirsutum HOM05D001858 ORTHO05D001838 5.2e-06 55.5 92 38.0
Lj7P618T36 Lonicera japonica HOM05D008047 ORTHO05D009832 6.8e-06 55.1 82 35.4
Psat0s5204g0040 Pisum sativum HOM05D001858 ORTHO05D001838 8.8e-06 54.7 75 34.7


User provided reference genes

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