Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8608 Trifolium pratense HOM05D014115 ORTHO05D015996 3.1e-149 531.9 303 100.0
Medtr5g095710 Medicago truncatula HOM05D014115 ORTHO05D004704 5.4e-61 238.8 228 66.7
Glyma.14G013800 Glycine max HOM05D014115 ORTHO05D004704 4.3e-34 149.4 258 46.1
Glyma.02G300100 Glycine max HOM05D014115 ORTHO05D004704 1.3e-33 147.9 262 46.2
VMungo0647G1046 Vigna mungo HOM05D014115 ORTHO05D004704 4.2e-29 132.9 255 41.2
Phvul.008G278800 Phaseolus vulgaris HOM05D014115 ORTHO05D004704 2.5e-26 123.6 214 44.4
Lj6g0007370 Lotus japonicus HOM05D005849 ORTHO05D004704 8.2e-25 118.6 251 45.0
Lalb_Chr15g0082031 Lupinus albus HOM05D005849 ORTHO05D004704 1.1e-24 118.2 223 42.6
Phvul.006G056700 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 1.8e-24 117.5 266 39.8
Glyma.08G329000 Glycine max HOM05D005849 ORTHO05D004704 1.7e-22 110.9 266 42.5
Glyma.18G077800 Glycine max HOM05D014115 ORTHO05D004704 1.0e-19 101.7 255 41.6
VMungo0540G1302 Vigna mungo HOM05D005849 ORTHO05D004704 2.2e-17 94.0 240 37.9
arahy.Tifrunner.gnm1.ann1.715EVP Arachis hypogaea HOM05D005849 ORTHO05D004704 2.0e-15 87.4 252 40.9
TPR.G35467 Trifolium pratense HOM05D014115 ORTHO05D004704 2.6e-15 87.0 250 37.6
QL08p004345 Quercus lobata HOM05D005849 ORTHO05D004704 2.2e-14 84.0 131 43.5
QL11p054311 Quercus lobata HOM05D005849 ORTHO05D004704 2.2e-14 84.0 131 43.5
arahy.Tifrunner.gnm1.ann1.UTL0P7 Arachis hypogaea HOM05D005849 ORTHO05D004704 3.2e-13 80.1 165 44.8
Potri.001G367100 Populus trichocarpa HOM05D005849 ORTHO05D004704 1.0e-11 75.1 129 41.1
Medtr1g070295 Medicago truncatula HOM05D012718 ORTHO05D015996 3.0e-11 73.6 55 72.7
Medtr1g070310 Medicago truncatula HOM05D012718 ORTHO05D015996 3.0e-11 73.6 55 72.7
Medtr1g070320 Medicago truncatula HOM05D012718 ORTHO05D015996 1.5e-10 71.2 55 70.9
Sabra16G0240400 Salix brachista HOM05D005849 ORTHO05D004704 1.7e-09 67.8 136 37.5
TPR.G9051 Trifolium pratense HOM05D012718 ORTHO05D015996 1.7e-09 67.8 57 63.2
CiPaw.11G203200 Carya illinoinensis HOM05D005849 ORTHO05D004704 2.2e-09 67.4 209 33.0
CANSAT11G2057 Cannabis sativa HOM05D005849 ORTHO05D004704 3.7e-09 66.6 126 42.1
Haze_09816 Corylus avellana HOM05D005849 ORTHO05D004704 4.8e-09 66.2 179 33.0
CiPaw.12G137700 Carya illinoinensis HOM05D005849 ORTHO05D004704 6.3e-09 65.9 231 32.9
Psat5g169040 Pisum sativum HOM05D014115 ORTHO05D004704 2.4e-08 63.9 221 30.3
Manes.03G140566 Manihot esculenta HOM05D005849 ORTHO05D004704 7.0e-08 62.4 165 33.3
Cfa020199 Carpinus fangiana HOM05D005849 ORTHO05D004704 1.0e-06 58.5 241 34.0
Medtr3g058930 Medicago truncatula HOM05D014115 ORTHO05D004704 1.3e-06 58.2 285 28.8
TAR629G2787 Trochodendron aralioides HOM05D005849 ORTHO05D004704 1.3e-06 58.2 123 39.8
Dinv10326 Davidia involucrata HOM05D005849 ORTHO05D004704 1.7e-06 57.8 165 36.4
PGR083G2364 Punica granatum HOM05D005849 ORTHO05D004704 3.8e-06 56.6 136 36.8
Manes.03G140700 Manihot esculenta HOM05D005849 ORTHO05D004704 5.0e-06 56.2 137 35.0
Manes.15G060700 Manihot esculenta HOM05D005849 ORTHO05D004704 6.5e-06 55.8 130 39.2
Medtr5g098480 Medicago truncatula HOM05D005849 ORTHO05D004704 6.5e-06 55.8 171 31.0


User provided reference genes

Program Settings