Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8540 Trifolium pratense HOM05D007981 ORTHO05D001345 1.5e-173 612.8 331 100.0
Medtr8g040940 Medicago truncatula HOM05D007981 ORTHO05D001345 1.2e-114 417.2 359 69.4
Psat4g190600 Pisum sativum HOM05D007981 ORTHO05D001345 2.2e-108 396.4 381 64.3
Lj3g0009424 Lotus japonicus HOM05D007981 ORTHO05D001345 1.8e-78 297.0 365 53.2
Phvul.011G197200 Phaseolus vulgaris HOM05D007981 ORTHO05D001345 3.8e-76 289.3 369 52.3
Glyma.15G228000 Glycine max HOM05D007981 ORTHO05D001345 1.1e-67 261.2 373 49.6
VMungo1127G1819 Vigna mungo HOM05D007981 ORTHO05D001345 1.4e-57 227.6 346 47.4
arahy.Tifrunner.gnm1.ann1.8NJ4D9 Arachis hypogaea HOM05D007981 ORTHO05D001345 8.9e-49 198.4 376 42.6
arahy.Tifrunner.gnm1.ann1.26SKGH Arachis hypogaea HOM05D007981 ORTHO05D001345 6.4e-47 192.2 376 41.0
Glyma.13G190700 Glycine max HOM05D007981 ORTHO05D001345 1.9e-22 110.9 180 48.9
Ciclev10017970m.g Citrus clementina HOM05D007981 ORTHO05D001345 3.9e-20 103.2 359 30.9
TAR633G1356 Trochodendron aralioides HOM05D007981 ORTHO05D001345 4.4e-16 89.7 343 30.0
Thecc.09G196000 Theobroma cacao HOM05D007981 ORTHO05D001345 3.8e-15 86.7 362 28.7
Oeu022685.1 Olea europaea HOM05D007981 ORTHO05D001345 1.1e-14 85.1 354 29.7
Hma1.2p1_0662F.1_g198260 Hydrangea macrophylla HOM05D007981 ORTHO05D001345 4.2e-14 83.2 354 28.0
GSVIVG01031362001 Vitis vinifera HOM05D007981 ORTHO05D001345 9.3e-14 82.0 348 28.7
MELO3C005819.2 Cucumis melo HOM05D007981 ORTHO05D001345 1.6e-10 71.2 373 31.1
Sed0005322 Sechium edule HOM05D007981 ORTHO05D001345 3.6e-10 70.1 344 29.7
Manes.12G000800 Manihot esculenta HOM05D007981 ORTHO05D001345 1.1e-09 68.6 346 26.0
TWI36G0229 Tripterygium wilfordii HOM05D007981 ORTHO05D001345 1.1e-09 68.6 346 28.0
Atru.chr10.126 Acer truncatum HOM05D007981 ORTHO05D001345 1.4e-09 68.2 364 28.0
Gorai.009G001400 Gossypium raimondii HOM05D007981 ORTHO05D001345 1.4e-09 68.2 341 28.4
MBI07_g42070_MAGBIO Magnolia biondii HOM05D007981 ORTHO05D001345 1.4e-09 68.2 345 27.5
Peaxi162Scf00344g00031 Petunia axillaris HOM05D007981 ORTHO05D001345 1.2e-08 65.1 373 28.4
Lsat_1_v5_gn_3_25100 Lactuca sativa HOM05D007981 ORTHO05D001345 1.5e-08 64.7 335 26.9
TAR636G1519 Trochodendron aralioides HOM05D007981 ORTHO05D001345 2.0e-08 64.3 344 26.7
Potri.010G177000 Populus trichocarpa HOM05D007981 ORTHO05D001345 5.8e-08 62.8 227 30.8
Actinidia19656 Actinidia chinensis HOM05D007981 ORTHO05D001345 1.3e-07 61.6 382 25.7
ECA246G2938 Erigeron canadensis HOM05D007981 ORTHO05D001345 6.4e-07 59.3 361 25.8
CAN.G691.25 Capsicum annuum HOM05D007981 ORTHO05D001345 1.4e-06 58.2 361 28.0
ClCG01G001160 Citrullus lanatus HOM05D007981 ORTHO05D001345 1.4e-06 58.2 387 29.5
Gohir.D05G001500 Gossypium hirsutum HOM05D007981 ORTHO05D001345 1.9e-06 57.8 211 28.9
Sabra10G0136000 Salix brachista HOM05D007981 ORTHO05D001345 4.2e-06 56.6 69 40.6
Migut.G01306 Erythranthe guttata HOM05D007981 ORTHO05D001345 7.1e-06 55.8 337 24.6
Migut.G01327 Erythranthe guttata HOM05D007981 ORTHO05D001345 9.3e-06 55.5 337 24.3


User provided reference genes

Program Settings