Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 2.4e-69 265.4 134 100.0
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 1.2e-65 253.1 134 94.0
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 2.3e-64 248.8 134 91.8
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 4.7e-57 224.6 134 82.1
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 2.2e-51 205.7 132 72.7
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 2.9e-51 205.3 134 73.9
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 3.8e-51 204.9 132 74.2
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 5.0e-51 204.5 132 74.2
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 2.5e-50 202.2 132 72.0
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 4.2e-50 201.4 129 71.3
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 2.7e-49 198.7 134 71.6
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 4.7e-49 198.0 134 69.4
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 4.7e-49 198.0 132 71.2
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 8.0e-49 197.2 134 70.9
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.0e-48 196.8 129 72.9
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.0e-48 196.8 129 72.9
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 2.3e-48 195.7 134 70.1
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 5.2e-48 194.5 132 68.9
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 2.6e-47 192.2 134 65.7
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 2.6e-47 192.2 132 68.2
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 2.6e-47 192.2 132 68.2
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 2.6e-47 192.2 132 68.9
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 3.4e-47 191.8 129 69.0
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 3.4e-47 191.8 132 68.2
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 4.4e-47 191.4 132 67.4
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 7.5e-47 190.7 132 67.4
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 7.5e-47 190.7 129 71.3
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 9.8e-47 190.3 132 70.5
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 1.7e-46 189.5 132 66.7
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 2.2e-46 189.1 129 69.0
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 2.2e-46 189.1 124 71.8
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 2.8e-46 188.7 129 69.0
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 3.7e-46 188.3 140 65.7
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.7e-46 188.3 132 65.9
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 3.7e-46 188.3 132 65.2
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 4.9e-46 188.0 131 70.2
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 8.3e-46 187.2 129 70.5
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 8.3e-46 187.2 132 68.2
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 8.3e-46 187.2 128 69.5
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 8.3e-46 187.2 132 68.2
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 8.3e-46 187.2 132 65.9
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 1.1e-45 186.8 132 66.7
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 1.4e-45 186.4 130 66.9
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 2.4e-45 185.7 132 66.7
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 3.1e-45 185.3 132 67.4
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 4.1e-45 184.9 132 66.7
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 4.1e-45 184.9 132 67.4
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 4.1e-45 184.9 134 66.4
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 5.4e-45 184.5 128 68.0
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 5.4e-45 184.5 134 66.4
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 7.0e-45 184.1 129 67.4
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 9.1e-45 183.7 132 63.6
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 9.1e-45 183.7 132 66.7
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 1.2e-44 183.3 132 66.7
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.2e-44 183.3 134 64.2
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 1.2e-44 183.3 127 68.5
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 1.6e-44 183.0 134 66.4
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.6e-44 183.0 132 63.6
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 2.0e-44 182.6 132 66.7
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.0e-44 182.6 132 63.6
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.0e-44 182.6 132 63.6
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 2.0e-44 182.6 132 64.4
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 2.7e-44 182.2 132 65.2
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 2.7e-44 182.2 132 67.4
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 3.5e-44 181.8 129 69.0
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 3.5e-44 181.8 130 67.7
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 4.5e-44 181.4 132 68.2
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 5.9e-44 181.0 129 66.7
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 1.0e-43 180.3 132 65.2
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 1.7e-43 179.5 132 62.9
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 2.9e-43 178.7 132 63.6
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 2.9e-43 178.7 132 65.2
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 2.9e-43 178.7 132 65.2
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 5.0e-43 177.9 127 66.1
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 6.6e-43 177.6 132 62.1
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 6.6e-43 177.6 132 62.1
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 8.6e-43 177.2 127 65.4
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 1.5e-42 176.4 131 60.3
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 1.9e-42 176.0 134 66.4
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 2.5e-42 175.6 132 63.6
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 5.6e-42 174.5 132 60.6
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 7.2e-42 174.1 127 63.0
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 1.2e-41 173.3 132 61.4
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 1.2e-41 173.3 131 67.2
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.6e-41 172.9 157 54.8
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 1.0e-40 170.2 128 64.8
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 1.0e-40 170.2 128 64.1
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 1.8e-40 169.5 128 64.1
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 4.0e-40 168.3 128 63.3
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 4.0e-40 168.3 128 63.3
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 4.0e-40 168.3 128 63.3
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 6.8e-40 167.5 128 63.3
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 6.8e-40 167.5 128 64.1
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 8.9e-40 167.2 129 62.0
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 8.9e-40 167.2 131 62.6
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 1.2e-39 166.8 128 62.5
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 1.5e-39 166.4 128 62.5
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 2.6e-39 165.6 128 61.7
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 5.7e-39 164.5 131 61.1
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 7.5e-39 164.1 132 61.4
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 9.8e-39 163.7 130 63.8
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 3.7e-38 161.8 137 60.6
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 3.7e-38 161.8 137 60.6
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 3.7e-38 161.8 137 60.6
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 4.9e-38 161.4 134 61.2
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 6.4e-38 161.0 137 59.1
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 1.1e-37 160.2 137 59.9
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 1.1e-37 160.2 138 58.7
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 2.4e-37 159.1 141 57.4
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 2.7e-36 155.6 106 70.8
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 4.6e-36 154.8 171 48.5
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 1.3e-35 153.3 132 57.6
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 3.9e-35 151.8 134 58.2
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 9.5e-34 147.1 136 55.9
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 1.0e-32 143.7 136 55.1
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.4e-29 133.3 127 55.1
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 1.4e-29 133.3 94 67.0
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 2.4e-29 132.5 132 48.5
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 3.2e-29 132.1 96 66.7
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 4.6e-28 128.3 127 48.8
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 4.4e-23 111.7 76 69.7
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 4.9e-22 108.2 76 65.8
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 1.1e-21 107.1 71 70.4
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 2.4e-21 105.9 75 65.3
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 7.1e-21 104.4 71 67.6
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.1e-20 102.8 75 64.0
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 1.0e-19 100.5 77 57.1
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 1.7e-19 99.8 119 42.9
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 2.3e-19 99.4 72 65.3
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 5.1e-19 98.2 71 64.8
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 5.1e-19 98.2 72 62.5
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 2.5e-18 95.9 69 63.8
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 2.5e-18 95.9 69 63.8
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 2.5e-18 95.9 62 69.4
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 9.5e-18 94.0 64 70.3
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 2.1e-17 92.8 68 61.8
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 3.6e-17 92.0 69 62.3
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 5.2e-16 88.2 62 64.5
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 2.6e-15 85.9 61 62.3
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.3e-14 83.6 54 74.1
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 7.1e-13 77.8 77 53.2
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 2.7e-12 75.9 56 62.5
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 3.0e-11 72.4 58 60.3
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 3.9e-11 72.0 121 37.2
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 2.5e-10 69.3 74 41.9
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 1.1e-08 63.9 132 25.8
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 2.0e-07 59.7 90 34.4
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 6.4e-06 54.7 79 30.4
PGSC0003DMG400003395 Solanum tuberosum HOM05D005138 ORTHO05D006318 6.4e-06 54.7 53 45.3


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