Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 7.1e-48 193.7 108 100.0
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 1.4e-40 169.5 108 86.1
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 2.7e-39 165.2 112 82.1
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 2.7e-39 165.2 112 82.1
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 8.7e-38 160.2 108 83.3
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 6.3e-36 154.1 110 80.0
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 1.4e-35 152.9 114 76.3
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 2.4e-35 152.1 110 78.2
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 2.4e-35 152.1 113 73.5
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 4.1e-35 151.4 113 76.1
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 2.6e-34 148.7 109 68.8
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 1.1e-32 143.3 109 67.0
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 1.1e-32 143.3 109 66.1
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 1.1e-32 143.3 109 66.1
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 1.4e-32 142.9 109 65.1
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 1.9e-32 142.5 109 65.1
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 2.5e-32 142.1 112 75.0
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 3.2e-32 141.7 109 70.6
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.2e-32 141.7 109 67.0
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 3.2e-32 141.7 109 71.6
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 4.2e-32 141.4 110 73.6
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 5.5e-32 141.0 107 63.6
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 7.2e-32 140.6 107 65.4
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 7.2e-32 140.6 108 68.5
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 1.6e-31 139.4 109 70.6
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.7e-31 138.7 108 64.8
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 2.7e-31 138.7 105 77.1
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 4.6e-31 137.9 112 64.3
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 4.6e-31 137.9 108 75.9
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.0e-30 136.7 108 63.9
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 1.8e-30 136.0 109 65.1
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 3.0e-30 135.2 108 62.0
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 3.0e-30 135.2 109 67.0
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 3.0e-30 135.2 109 67.0
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 3.9e-30 134.8 113 67.3
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 3.9e-30 134.8 113 67.3
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 3.9e-30 134.8 109 69.7
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 5.1e-30 134.4 108 65.7
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 5.1e-30 134.4 109 65.1
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 5.1e-30 134.4 114 66.7
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.1e-30 134.4 109 63.3
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 5.1e-30 134.4 103 71.8
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 6.7e-30 134.0 108 71.3
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 6.7e-30 134.0 102 67.6
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 8.8e-30 133.7 114 61.4
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 8.8e-30 133.7 109 64.2
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 1.1e-29 133.3 110 64.5
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 1.1e-29 133.3 115 66.1
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 1.1e-29 133.3 109 61.5
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 1.5e-29 132.9 106 70.8
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 1.5e-29 132.9 110 64.5
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.5e-29 132.9 109 66.1
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 1.5e-29 132.9 109 65.1
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 1.9e-29 132.5 109 66.1
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 1.9e-29 132.5 109 64.2
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 3.3e-29 131.7 114 60.5
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 3.3e-29 131.7 109 63.3
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 3.3e-29 131.7 103 65.0
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 3.3e-29 131.7 110 69.1
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 4.3e-29 131.3 109 65.1
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 5.7e-29 131.0 109 63.3
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 9.7e-29 130.2 112 70.5
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 9.7e-29 130.2 112 59.8
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 9.7e-29 130.2 109 59.6
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 9.7e-29 130.2 108 62.0
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 9.7e-29 130.2 107 64.5
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 2.2e-28 129.0 111 67.6
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 2.2e-28 129.0 108 60.2
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.2e-28 129.0 103 65.0
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.8e-28 128.6 109 64.2
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 8.2e-28 127.1 117 59.0
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 1.1e-27 126.7 105 63.8
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.4e-27 126.3 107 61.7
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.4e-27 126.3 107 61.7
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 1.8e-27 125.9 107 67.3
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 1.8e-27 125.9 107 67.3
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 2.4e-27 125.6 104 66.3
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 3.1e-27 125.2 108 63.0
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 4.1e-27 124.8 98 72.4
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 1.5e-26 122.9 114 67.5
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.5e-26 122.9 108 64.8
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 1.5e-26 122.9 101 64.4
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 2.6e-26 122.1 90 76.7
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 3.4e-26 121.7 109 63.3
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 4.5e-26 121.3 114 66.7
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 4.5e-26 121.3 107 62.6
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 4.5e-26 121.3 109 67.0
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 5.9e-26 120.9 102 60.8
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 5.9e-26 120.9 122 54.9
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 3.8e-25 118.2 108 55.6
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 6.5e-25 117.5 109 58.7
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 8.5e-25 117.1 90 67.8
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 1.9e-24 115.9 109 62.4
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 1.9e-24 115.9 109 62.4
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 2.5e-24 115.5 85 72.9
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 5.5e-24 114.4 104 54.8
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 3.6e-23 111.7 109 63.3
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 2.3e-22 109.0 81 85.2
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 3.0e-22 108.6 107 56.1
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 3.9e-22 108.2 112 54.5
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 8.8e-22 107.1 107 59.8
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 1.5e-21 106.3 83 63.9
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 2.0e-21 105.9 89 64.0
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 5.7e-21 104.4 109 56.9
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 5.7e-21 104.4 119 60.5
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 2.2e-20 102.4 108 50.9
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.4e-19 99.8 95 60.0
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 1.2e-18 96.7 107 54.2
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.0e-17 91.3 86 59.3
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.4e-16 89.7 50 86.0
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 8.8e-14 80.5 86 61.6
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.6e-13 79.0 100 47.0
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 4.8e-12 74.7 102 52.9
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 4.8e-12 74.7 70 64.3
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 1.4e-11 73.2 71 59.2
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 4.1e-11 71.6 126 35.7
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.3e-09 66.6 106 43.4
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 5.5e-08 61.2 109 45.9
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 1.4e-06 56.6 57 56.1


User provided reference genes

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