Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 1.2e-46 189.5 97 100.0
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 8.4e-40 166.8 97 90.7
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 1.9e-39 165.6 97 92.8
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 2.4e-39 165.2 97 92.8
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 9.3e-39 163.3 97 91.8
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 1.7e-37 159.1 96 91.7
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 2.3e-37 158.7 97 83.5
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 3.0e-37 158.3 96 88.5
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 1.9e-36 155.6 97 85.6
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 3.3e-36 154.8 97 83.5
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 4.3e-36 154.5 94 85.1
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 7.3e-36 153.7 95 87.4
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 1.6e-35 152.5 97 84.5
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 3.6e-35 151.4 97 84.5
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 6.2e-35 150.6 97 83.5
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 6.2e-35 150.6 96 84.4
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 1.1e-34 149.8 90 87.8
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.4e-34 149.4 95 82.1
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 1.4e-34 149.4 87 86.2
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 1.8e-34 149.1 93 84.9
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 1.8e-34 149.1 96 83.3
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 1.8e-34 149.1 94 81.9
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 2.4e-34 148.7 84 86.9
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.4e-34 148.7 97 82.5
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 2.4e-34 148.7 96 83.3
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 2.4e-34 148.7 88 83.0
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 2.4e-34 148.7 83 88.0
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 3.1e-34 148.3 97 82.5
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 3.1e-34 148.3 87 88.5
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 4.0e-34 147.9 97 80.4
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 4.0e-34 147.9 86 88.4
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 4.0e-34 147.9 95 83.2
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 4.0e-34 147.9 87 85.1
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 5.3e-34 147.5 96 83.3
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 6.9e-34 147.1 97 81.4
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 6.9e-34 147.1 92 87.0
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 6.9e-34 147.1 85 87.1
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 9.0e-34 146.7 87 85.1
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 2.0e-33 145.6 96 75.0
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.0e-33 145.6 85 84.7
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 2.0e-33 145.6 97 79.4
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 2.6e-33 145.2 87 86.2
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 2.6e-33 145.2 84 82.1
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 3.4e-33 144.8 92 83.7
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 4.5e-33 144.4 83 85.5
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 4.5e-33 144.4 95 78.9
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 5.8e-33 144.1 96 78.1
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 9.9e-33 143.3 96 80.2
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 9.9e-33 143.3 85 83.5
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.3e-32 142.9 85 83.5
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.3e-32 142.9 85 83.5
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.3e-32 142.9 86 82.6
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 1.7e-32 142.5 97 72.2
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 1.7e-32 142.5 86 79.1
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 2.2e-32 142.1 85 83.5
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 2.2e-32 142.1 97 73.2
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 2.2e-32 142.1 92 78.3
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 2.2e-32 142.1 89 79.8
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 3.8e-32 141.4 97 77.3
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 4.9e-32 141.0 85 83.5
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 4.9e-32 141.0 82 80.5
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 4.9e-32 141.0 80 81.2
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 4.9e-32 141.0 86 76.7
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 4.9e-32 141.0 97 78.4
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 6.4e-32 140.6 94 72.3
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 6.4e-32 140.6 94 72.3
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 6.4e-32 140.6 86 82.6
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 8.4e-32 140.2 89 77.5
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 8.4e-32 140.2 89 77.5
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 8.4e-32 140.2 89 77.5
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.1e-31 139.8 98 71.4
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 1.4e-31 139.4 88 78.4
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 1.9e-31 139.0 97 75.3
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 2.4e-31 138.7 85 83.5
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 4.2e-31 137.9 76 88.2
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 5.4e-31 137.5 86 76.7
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 5.4e-31 137.5 87 79.3
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 5.4e-31 137.5 74 87.8
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 5.4e-31 137.5 88 78.4
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 7.1e-31 137.1 78 84.6
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 7.1e-31 137.1 82 78.0
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 1.6e-30 136.0 93 77.4
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.6e-30 136.0 93 77.4
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 2.1e-30 135.6 82 78.0
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 2.7e-30 135.2 82 78.0
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 2.7e-30 135.2 82 78.0
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 2.7e-30 135.2 82 78.0
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 2.7e-30 135.2 82 78.0
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 2.7e-30 135.2 88 80.7
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 3.5e-30 134.8 112 69.6
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.5e-30 134.8 115 67.0
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 4.6e-30 134.4 82 78.0
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 7.9e-30 133.7 82 76.8
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 1.3e-29 132.9 79 78.5
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 3.0e-29 131.7 85 74.1
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 3.9e-29 131.3 153 55.6
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 5.1e-29 131.0 99 70.7
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 5.1e-29 131.0 85 80.0
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 6.7e-29 130.6 93 75.3
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 8.7e-29 130.2 118 62.7
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 1.1e-28 129.8 85 83.5
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 1.9e-28 129.0 74 89.2
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 3.3e-28 128.3 81 84.0
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 3.3e-28 128.3 87 70.1
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 3.3e-28 128.3 96 70.8
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 4.3e-28 127.9 101 71.3
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 2.8e-27 125.2 99 71.7
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 2.4e-26 122.1 76 84.2
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 3.1e-26 121.7 83 78.3
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 3.1e-26 121.7 84 72.6
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.0e-25 119.0 83 77.1
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 4.5e-25 117.9 81 79.0
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 1.7e-24 115.9 74 81.1
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 1.7e-24 115.9 79 72.2
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 2.2e-24 115.5 66 81.8
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.9e-24 115.2 84 69.0
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 1.4e-23 112.8 68 85.3
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 1.6e-22 109.4 96 71.9
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 3.9e-21 104.8 73 72.6
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-20 103.2 78 65.4
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 2.0e-17 92.4 47 93.6
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 1.0e-16 90.1 93 58.1
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 3.2e-15 85.1 61 75.4
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 9.3e-15 83.6 92 47.8
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 6.0e-14 80.9 63 58.7
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 6.3e-11 70.9 62 62.9
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 8.2e-11 70.5 57 61.4
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 2.4e-10 68.9 63 57.1
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 5.0e-08 61.2 48 62.5
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 5.0e-08 61.2 48 62.5
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 5.0e-08 61.2 48 62.5
Pp3c3_450 Physcomitrium patens HOM05D005828 ORTHO05D006822 6.1e-06 54.3 74 43.2


User provided reference genes

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