Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8494 Trifolium pratense HOM05D006191 ORTHO05D007660 5.7e-28 127.1 75 100.0
Medtr3g434780 Medicago truncatula HOM05D006191 ORTHO05D007660 1.7e-27 125.6 75 98.7
Glyma.08G302200 Glycine max HOM05D006191 ORTHO05D007660 3.7e-27 124.4 75 97.3
Thecc.10G162100 Theobroma cacao HOM05D006191 ORTHO05D007660 4.8e-27 124.0 75 97.3
Atru.chr12.1349 Acer truncatum HOM05D006191 ORTHO05D007660 6.3e-27 123.6 75 97.3
Manes.01G180500 Manihot esculenta HOM05D006191 ORTHO05D007660 6.3e-27 123.6 75 97.3
Oeu030629.1 Olea europaea HOM05D006191 ORTHO05D007660 1.1e-26 122.9 75 96.0
CDE02G2705 Ceratophyllum demersum HOM05D006191 ORTHO05D007660 2.4e-26 121.7 75 90.7
MBI13_g01622_MAGBIO Magnolia biondii HOM05D006191 ORTHO05D007660 2.4e-26 121.7 75 96.0
CSS0014439 Camellia sinensis var. sinensis HOM05D006191 ORTHO05D007660 3.1e-26 121.3 75 96.0
DCAR_002114 Daucus carota HOM05D006191 ORTHO05D007660 3.1e-26 121.3 75 92.0
Duzib106G0217 Durio zibethinus HOM05D006191 ORTHO05D007660 3.1e-26 121.3 75 96.0
Duzib128G0357 Durio zibethinus HOM05D006191 ORTHO05D007660 3.1e-26 121.3 75 96.0
Gohir.A10G183900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 3.1e-26 121.3 75 96.0
Gohir.D10G191200 Gossypium hirsutum HOM05D006191 ORTHO05D007660 3.1e-26 121.3 75 96.0
Gorai.011G214000 Gossypium raimondii HOM05D006191 ORTHO05D007660 3.1e-26 121.3 75 96.0
TAR623G0607 Trochodendron aralioides HOM05D006191 ORTHO05D007660 3.1e-26 121.3 75 96.0
Potri.009G071900 Populus trichocarpa HOM05D006191 ORTHO05D007660 4.1e-26 120.9 75 94.7
Sabra09G0054200 Salix brachista HOM05D006191 ORTHO05D007660 4.1e-26 120.9 75 94.7
GSVIVG01037255001 Vitis vinifera HOM05D006191 ORTHO05D007660 4.1e-26 120.9 75 94.7
CiPaw.14G114100 Carya illinoinensis HOM05D006191 ORTHO05D007660 5.3e-26 120.6 75 94.7
COL.COLO4_04799 Corchorus olitorius HOM05D006191 ORTHO05D007660 5.3e-26 120.6 75 94.7
Lalb_Chr07g0183161 Lupinus albus HOM05D006191 ORTHO05D007660 5.3e-26 120.6 75 93.3
Potri.001G277100 Populus trichocarpa HOM05D006191 ORTHO05D007660 5.3e-26 120.6 75 93.3
THA.LOC104819131 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 5.3e-26 120.6 75 94.7
TWI38G0245 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 5.3e-26 120.6 75 93.3
TWI63G0884 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 5.3e-26 120.6 75 93.3
Hma1.2p1_0115F.1_g055930 Hydrangea macrophylla HOM05D006191 ORTHO05D007660 7.0e-26 120.2 75 93.3
Lj6g0026433 Lotus japonicus HOM05D006191 ORTHO05D007660 7.0e-26 120.2 75 92.0
Sopen12g034350 Solanum pennellii HOM05D006191 ORTHO05D007660 7.0e-26 120.2 75 93.3
MELO3C014567.2 Cucumis melo HOM05D006191 ORTHO05D007660 9.1e-26 119.8 75 94.7
CsaV3_6G039080 Cucumis sativus L. HOM05D006191 ORTHO05D007660 9.1e-26 119.8 75 94.7
Lsat_1_v5_gn_2_33900 Lactuca sativa HOM05D006191 ORTHO05D007660 9.1e-26 119.8 75 92.0
Gohir.D13G004600 Gossypium hirsutum HOM05D006191 ORTHO05D007660 1.2e-25 119.4 75 94.7
Sopen11g024870 Solanum pennellii HOM05D006191 ORTHO05D007660 1.2e-25 119.4 75 93.3
PGSC0003DMG400031241 Solanum tuberosum HOM05D006191 ORTHO05D007660 1.2e-25 119.4 75 93.3
Dinv05064 Davidia involucrata HOM05D006191 ORTHO05D007660 1.5e-25 119.0 75 92.0
Peaxi162Scf00004g04011 Petunia axillaris HOM05D006191 ORTHO05D007660 1.5e-25 119.0 75 92.0
Sed0001199 Sechium edule HOM05D006191 ORTHO05D007660 1.5e-25 119.0 75 93.3
THA.LOC104825593 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 1.5e-25 119.0 75 93.3
HPP92_025477 Vanilla planifolia HOM05D006191 ORTHO05D007660 1.5e-25 119.0 75 92.0
Cpa.g.sc3.359 Carica papaya HOM05D006191 ORTHO05D007660 2.0e-25 118.6 75 93.3
Eucgr.J01186 Eucalyptus grandis HOM05D006191 ORTHO05D007660 2.0e-25 118.6 75 92.0
Oeu001494.1 Olea europaea HOM05D006191 ORTHO05D007660 2.0e-25 118.6 75 92.0
PGR031G0246 Punica granatum HOM05D006191 ORTHO05D007660 2.0e-25 118.6 75 93.3
CAN.G484.24 Capsicum annuum HOM05D006191 ORTHO05D007660 2.6e-25 118.2 75 92.0
Nitab4.5_0004018g0100 Nicotiana tabacum HOM05D006191 ORTHO05D007660 3.5e-25 117.9 75 90.7
Duzib114G0719 Durio zibethinus HOM05D006191 ORTHO05D007660 4.5e-25 117.5 75 93.3
Gorai.013G005000 Gossypium raimondii HOM05D006191 ORTHO05D007660 4.5e-25 117.5 75 93.3
AagrBONN_evm.TU.Sc2ySwM_362.136 Anthoceros agrestis HOM05D006191 ORTHO05D007660 5.9e-25 117.1 75 89.3
QL01p017491 Quercus lobata HOM05D006191 ORTHO05D007660 5.9e-25 117.1 74 93.2
HanXRQChr06g0182571 Helianthus annuus HOM05D006191 ORTHO05D007660 1.0e-24 116.3 75 89.3
Sc11g0006400 Simmondsia chinensis HOM05D006191 ORTHO05D007660 1.0e-24 116.3 75 92.0
Aa31LG5G18460 Aethionema arabicum HOM05D006191 ORTHO05D007660 1.3e-24 115.9 75 89.3
Thhalv10021870m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 1.3e-24 115.9 75 89.3
Nn2g14883 Nelumbo nucifera HOM05D006191 ORTHO05D007660 1.3e-24 115.9 75 90.7
Nn7g36644 Nelumbo nucifera HOM05D000965 ORTHO05D000842 1.3e-24 115.9 75 90.7
CAN.G1850.1 Capsicum annuum HOM05D006191 ORTHO05D007660 1.7e-24 115.5 75 90.7
Ciclev10017371m.g Citrus clementina HOM05D006191 ORTHO05D007660 1.7e-24 115.5 76 93.4
CANSAT54G1797 Cannabis sativa HOM05D006191 ORTHO05D007660 2.2e-24 115.2 75 90.7
Thhalv10022475m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 2.2e-24 115.2 75 88.0
Glyma.18G117700 Glycine max HOM05D006191 ORTHO05D007660 2.2e-24 115.2 71 97.2
Potri.003G197801 Populus trichocarpa HOM05D006191 ORTHO05D007660 2.2e-24 115.2 75 90.7
Potri.T125106 Populus trichocarpa HOM05D006191 ORTHO05D007660 2.2e-24 115.2 75 90.7
CARHR082640 Cardamine hirsuta HOM05D006191 ORTHO05D007660 5.0e-24 114.0 75 86.7
Migut.D00650 Erythranthe guttata HOM05D006191 ORTHO05D007660 5.0e-24 114.0 75 86.7
Atru.chr3.2798 Acer truncatum HOM05D006191 ORTHO05D007660 6.5e-24 113.6 71 94.4
Solyc12g099705.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 8.5e-24 113.2 75 89.3
PSO339G4970 Papaver somniferum HOM05D006191 ORTHO05D007660 1.4e-23 112.5 75 89.3
PSO384G4772 Papaver somniferum HOM05D006191 ORTHO05D007660 1.4e-23 112.5 75 89.3
CDE04G1776 Ceratophyllum demersum HOM05D003123 ORTHO05D003492 1.9e-23 112.1 75 89.3
Mapoly0046s0044 Marchantia polymorpha HOM05D006191 ORTHO05D007660 3.2e-23 111.3 75 89.3
EL10Ac2g02816 Beta vulgaris HOM05D006191 ORTHO05D007660 4.2e-23 110.9 75 86.7
Carub.0003s0749 Capsella rubella HOM05D006191 ORTHO05D007660 7.2e-23 110.2 72 87.5
ECA238G0093 Erigeron canadensis HOM05D006191 ORTHO05D007660 9.4e-23 109.8 75 84.0
Sabra16G0171200 Salix brachista HOM05D006191 ORTHO05D007660 1.2e-22 109.4 78 85.9
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 3.6e-22 107.8 69 94.2
AT3G07910 Arabidopsis thaliana HOM05D006191 ORTHO05D007660 4.7e-22 107.5 75 85.3
BcaB04g21265 Brassica carinata HOM05D006191 ORTHO05D007660 8.0e-22 106.7 74 86.5
A05p40330 Brassica napus HOM05D006191 ORTHO05D007660 8.0e-22 106.7 73 86.3
A03p35550 Brassica napus HOM05D006191 ORTHO05D007660 3.0e-21 104.8 72 86.1
C03p43190 Brassica napus HOM05D006191 ORTHO05D007660 3.0e-21 104.8 72 86.1
C05p59410 Brassica napus HOM05D006191 ORTHO05D007660 3.0e-21 104.8 73 83.6
BolC3t16588H Brassica oleracea HOM05D006191 ORTHO05D007660 3.0e-21 104.8 72 86.1
BolC5t34598H Brassica oleracea HOM05D006191 ORTHO05D007660 3.0e-21 104.8 73 83.6
BraA03t12731Z Brassica rapa HOM05D006191 ORTHO05D007660 3.0e-21 104.8 72 86.1
Gohir.A13G004900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 6.7e-21 103.6 82 82.9
BcaC05g29581 Brassica carinata HOM05D006191 ORTHO05D007660 1.1e-20 102.8 73 82.2
Pp3c9_12820 Physcomitrium patens HOM05D006191 ORTHO05D007660 1.1e-20 102.8 75 72.0
MD00G1126200 Malus domestica HOM05D006191 ORTHO05D007660 5.7e-20 100.5 72 80.6
MD00G1154200 Malus domestica HOM05D006191 ORTHO05D007660 5.7e-20 100.5 72 80.6
Solyc11g150142.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 5.7e-20 100.5 69 81.2
Sp3g06830 Schrenkiella parvula HOM05D006191 ORTHO05D007660 9.7e-20 99.8 69 82.6
Cc01_g05600 Coffea canephora HOM05D006191 ORTHO05D007660 1.7e-19 99.0 72 81.9
BcaC09g47957 Brassica carinata HOM05D006191 ORTHO05D007660 2.8e-19 98.2 73 80.8
BolC1t05519H Brassica oleracea HOM05D006191 ORTHO05D007660 2.8e-19 98.2 73 80.8
BraA01t04352Z Brassica rapa HOM05D006191 ORTHO05D007660 2.8e-19 98.2 73 80.8
ClCG02G022950 Citrullus lanatus HOM05D006191 ORTHO05D007660 2.8e-19 98.2 125 49.6
FvH4_3g28030 Fragaria vesca HOM05D006191 ORTHO05D007660 2.8e-19 98.2 75 74.7
FAN16G3748 Fragaria x ananassa HOM05D006191 ORTHO05D007660 2.8e-19 98.2 75 74.7
RcHm_v2.0_Chr5g0050711 Rosa chinensis HOM05D006191 ORTHO05D007660 2.8e-19 98.2 75 74.7
SMO301G0059 Selaginella moellendorffii HOM05D006191 ORTHO05D007660 2.8e-19 98.2 72 79.2
Prupe.4G268400 Prunus persica HOM05D006191 ORTHO05D007660 4.8e-19 97.4 70 80.0
Haze_23211 Corylus avellana HOM05D000001 ORTHO05D000003 6.3e-19 97.1 49 93.9
FAN25G1591 Fragaria x ananassa HOM05D006191 ORTHO05D007660 6.3e-19 97.1 75 73.3
Pp3c15_6032 Physcomitrium patens HOM05D006191 ORTHO05D007660 6.3e-19 97.1 75 69.3
Zm00001eb432230 Zea mays HOM05D006191 ORTHO05D007660 1.4e-18 95.9 70 85.7
Cfa010050 Carpinus fangiana HOM05D000477 ORTHO05D000338 1.8e-18 95.5 67 86.6
FAN21G2777 Fragaria x ananassa HOM05D006191 ORTHO05D007660 7.0e-18 93.6 72 73.6
Lalb_Chr04g0264081 Lupinus albus HOM05D006191 ORTHO05D007660 9.1e-18 93.2 68 85.3
Lalb_Chr25g0282111 Lupinus albus HOM05D006191 ORTHO05D007660 9.1e-18 93.2 68 85.3
ATR0745G066 Amborella trichopoda HOM05D006191 ORTHO05D007660 1.2e-17 92.8 76 77.6
AUR62037186 Chenopodium quinoa HOM05D006191 ORTHO05D007660 2.0e-17 92.0 49 85.7
Psat5g217760 Pisum sativum HOM05D006191 ORTHO05D007660 2.6e-17 91.7 68 83.8
TPR.G17809 Trifolium pratense HOM05D006191 ORTHO05D007660 2.6e-17 91.7 68 83.8
Aqoxy2G00346 Aquilegia oxysepala HOM05D006191 ORTHO05D007660 4.5e-17 90.9 68 67.6
Glyma.04G138500 Glycine max HOM05D006191 ORTHO05D007660 1.3e-16 89.4 68 82.4
arahy.Tifrunner.gnm1.ann1.MB5P1Q Arachis hypogaea HOM05D006191 ORTHO05D007660 2.2e-16 88.6 68 82.4
BcaC09g47961 Brassica carinata HOM05D006191 ORTHO05D007660 2.9e-16 88.2 64 82.8
Phvul.005G027500 Phaseolus vulgaris HOM05D006191 ORTHO05D007660 3.8e-16 87.8 68 80.9
arahy.Tifrunner.gnm1.ann1.HDQ2FX Arachis hypogaea HOM05D006191 ORTHO05D007660 5.0e-16 87.4 68 80.9
Medtr3g017440 Medicago truncatula HOM05D006191 ORTHO05D007660 5.0e-16 87.4 68 80.9
Lj3g0010990 Lotus japonicus HOM05D006191 ORTHO05D007660 1.9e-15 85.5 68 79.4
Zm00001eb068350 Zea mays HOM05D006191 ORTHO05D007660 3.2e-15 84.7 63 85.7
MCO15G227 Micromonas commoda HOM05D006191 ORTHO05D007660 5.5e-15 84.0 67 68.7
PRCOL_00002293 Prasinoderma coloniale HOM05D006191 ORTHO05D007660 1.8e-13 79.0 72 54.2
Cre01.g010500 Chlamydomonas reinhardtii HOM05D006191 ORTHO05D007660 3.0e-13 78.2 69 50.7
Rhsim01G0194500 Rhododendron simsii HOM05D000189 ORTHO05D000474 5.2e-13 77.4 41 92.7
FAN11G1162 Fragaria x ananassa HOM05D006191 ORTHO05D007660 2.6e-12 75.1 117 47.0
TAR633G2362 Trochodendron aralioides HOM05D006191 ORTHO05D007660 2.7e-09 65.1 47 89.4
VMungo1080G0693 Vigna mungo HOM05D006191 ORTHO05D007660 2.7e-09 65.1 113 47.8
Dinv36184 Davidia involucrata HOM05D006191 ORTHO05D007660 5.9e-09 63.9 47 87.2
SalBow1G5107 Salvia bowleyana HOM05D006191 ORTHO05D007660 2.7e-06 55.1 45 62.2


User provided reference genes

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