Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8431 Trifolium pratense HOM05D009500 ORTHO05D000368 7.2e-59 230.3 113 100.0
TPR.G6938 Trifolium pratense HOM05D009500 ORTHO05D000368 2.7e-37 158.7 90 86.7
TPR.G4800 Trifolium pratense HOM05D009500 ORTHO05D000368 8.6e-28 127.1 88 70.5
TPR.G9274 Trifolium pratense HOM05D009500 ORTHO05D000368 9.5e-27 123.6 94 64.9
TPR.G4783 Trifolium pratense HOM05D009500 ORTHO05D000368 2.8e-26 122.1 92 63.0
TPR.G6942 Trifolium pratense HOM05D009500 ORTHO05D000368 6.1e-26 120.9 93 59.1
TPR.G7001 Trifolium pratense HOM05D009500 ORTHO05D000368 8.0e-26 120.6 92 59.8
TPR.G4771 Trifolium pratense HOM05D009500 ORTHO05D000368 1.4e-25 119.8 88 64.8
TPR.G4702 Trifolium pratense HOM05D009500 ORTHO05D000368 2.3e-25 119.0 88 61.4
TPR.G4705 Trifolium pratense HOM05D008175 ORTHO05D000368 1.2e-24 116.7 88 62.5
Medtr7g116580 Medicago truncatula HOM05D009500 ORTHO05D000368 5.7e-24 114.4 87 62.1
Medtr1g111630 Medicago truncatula HOM05D009500 ORTHO05D000368 1.4e-22 109.8 96 55.2
Medtr7g116250 Medicago truncatula HOM05D008175 ORTHO05D000368 4.6e-21 104.8 79 65.8
Medtr7g114090 Medicago truncatula HOM05D009500 ORTHO05D000368 2.3e-20 102.4 87 58.6
Ca_25084_v3 Cicer arietinum L. HOM05D009500 ORTHO05D010403 4.3e-19 98.2 86 58.1
Medtr5g090500 Medicago truncatula HOM05D009500 ORTHO05D000368 7.0e-14 80.9 63 63.5
TPR.G6989 Trifolium pratense HOM05D009500 ORTHO05D000368 7.0e-14 80.9 49 81.6
Psat3g003680 Pisum sativum HOM05D009500 ORTHO05D000368 8.6e-12 73.9 100 47.0
TPR.G4335 Trifolium pratense HOM05D009500 ORTHO05D000368 1.9e-11 72.8 55 65.5
TAR365G0708 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.6e-08 62.4 100 39.0
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 4.4e-08 61.6 90 43.3
FAN14G3739 Fragaria x ananassa HOM05D000576 ORTHO05D000368 7.5e-08 60.8 80 48.8
FAN06G1177 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.3e-07 60.1 92 45.7
FAN06G5009 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.3e-07 60.1 92 45.7
CSS0031751 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 2.9e-07 58.9 105 40.0
FAN01G2751 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.7e-07 58.5 94 40.4
TPR.G20555 Trifolium pratense HOM05D008175 ORTHO05D010403 3.7e-07 58.5 90 37.8
TPR.G24323 Trifolium pratense HOM05D008175 ORTHO05D010403 6.4e-07 57.8 97 40.2
FvH4_7g27481 Fragaria vesca HOM05D008847 ORTHO05D000368 8.3e-07 57.4 92 44.6
Medtr6g013240 Medicago truncatula HOM05D008175 ORTHO05D010403 8.3e-07 57.4 89 39.3
Medtr6g013380 Medicago truncatula HOM05D008175 ORTHO05D010403 8.3e-07 57.4 89 39.3
ATR0820G286 Amborella trichopoda HOM05D000312 ORTHO05D000221 1.1e-06 57.0 102 34.3
FAN06G2289 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.4e-06 56.6 86 40.7
FAN10G0882 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.2e-06 55.5 86 40.7
MBI02_g05996_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D008290 3.2e-06 55.5 84 44.0
Medtr7g095560 Medicago truncatula HOM05D008175 ORTHO05D010403 3.2e-06 55.5 97 37.1
FAN06G0982 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.4e-06 54.7 86 39.5
AUR62016913 Chenopodium quinoa HOM05D000576 ORTHO05D008290 7.1e-06 54.3 94 37.2
RcHm_v2.0_Chr2g0166621 Rosa chinensis HOM05D000576 ORTHO05D000368 7.1e-06 54.3 113 34.5
ATR0584G144 Amborella trichopoda HOM05D000312 ORTHO05D000221 9.2e-06 53.9 88 37.5
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.2e-06 53.9 91 42.9
TAR633G2125 Trochodendron aralioides HOM05D000576 ORTHO05D000368 9.2e-06 53.9 71 42.3


User provided reference genes

Program Settings