Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8413 Trifolium pratense HOM05D006825 ORTHO05D008510 2.4e-104 382.1 186 100.0
Ca_22387_v3 Cicer arietinum L. HOM05D006825 ORTHO05D008510 6.0e-95 350.9 181 91.7
Medtr8g075430 Medicago truncatula HOM05D006825 ORTHO05D008510 2.6e-90 335.5 181 90.6
Lj4g0003754 Lotus japonicus HOM05D006825 ORTHO05D008510 1.0e-86 323.6 181 85.1
Glyma.02G047100 Glycine max HOM05D006825 ORTHO05D008510 9.6e-85 317.0 181 83.4
arahy.Tifrunner.gnm1.ann1.JPTZ14 Arachis hypogaea HOM05D006825 ORTHO05D008510 3.1e-83 312.0 183 80.9
Phvul.003G264100 Phaseolus vulgaris HOM05D006825 ORTHO05D008510 3.1e-83 312.0 181 80.7
VMungo0251G0870 Vigna mungo HOM05D006825 ORTHO05D008510 4.0e-83 311.6 181 81.2
arahy.Tifrunner.gnm1.ann1.89Z5DT Arachis hypogaea HOM05D006825 ORTHO05D008510 7.6e-82 307.4 183 79.8
Lalb_Chr05g0229811 Lupinus albus HOM05D006825 ORTHO05D008510 7.1e-80 300.8 180 80.6
QL06p050789 Quercus lobata HOM05D006825 ORTHO05D008510 3.0e-78 295.4 177 79.7
Cfa006985 Carpinus fangiana HOM05D000348 ORTHO05D000244 1.3e-76 290.0 174 78.7
Haze_03748 Corylus avellana HOM05D006825 ORTHO05D008510 1.6e-76 289.7 176 77.3
Thecc.01G016500 Theobroma cacao HOM05D006825 ORTHO05D008510 8.2e-76 287.3 176 77.3
CSS0032071 Camellia sinensis var. sinensis HOM05D006825 ORTHO05D008510 1.4e-75 286.6 182 74.7
MD02G1129700 Malus domestica HOM05D006825 ORTHO05D008510 6.9e-75 284.3 184 72.8
Lsat_1_v5_gn_4_145960 Lactuca sativa HOM05D006825 ORTHO05D008510 1.5e-74 283.1 180 75.0
CSS0030622 Camellia sinensis var. sinensis HOM05D006825 ORTHO05D008510 2.0e-74 282.7 182 73.6
Potri.007G056800 Populus trichocarpa HOM05D006825 ORTHO05D008510 4.5e-74 281.6 185 73.0
Prupe.7G169900 Prunus persica HOM05D006825 ORTHO05D008510 7.6e-74 280.8 185 70.8
CANSAT25G1468 Cannabis sativa HOM05D006825 ORTHO05D008510 1.3e-73 280.0 185 71.4
Duzib147G0784 Durio zibethinus HOM05D006825 ORTHO05D008510 2.2e-73 279.3 174 77.0
Peaxi162Scf00635g00623 Petunia axillaris HOM05D006825 ORTHO05D008510 2.2e-73 279.3 178 73.6
Sabra07G0048700 Salix brachista HOM05D006825 ORTHO05D008510 3.8e-73 278.5 185 72.4
Gohir.A02G171400 Gossypium hirsutum HOM05D006825 ORTHO05D008510 4.9e-73 278.1 176 75.6
Nitab4.5_0000438g0130 Nicotiana tabacum HOM05D006825 ORTHO05D008510 4.9e-73 278.1 176 75.0
Nitab4.5_0004340g0050 Nicotiana tabacum HOM05D006825 ORTHO05D008510 4.9e-73 278.1 176 75.0
CiPaw.08G130700 Carya illinoinensis HOM05D006825 ORTHO05D008510 6.5e-73 277.7 176 73.3
Dinv33645 Davidia involucrata HOM05D006825 ORTHO05D008510 1.4e-72 276.6 184 73.9
FAN19G1602 Fragaria x ananassa HOM05D006825 ORTHO05D008510 1.9e-72 276.2 182 70.9
Gohir.D03G008700 Gossypium hirsutum HOM05D006825 ORTHO05D008510 2.5e-72 275.8 176 75.6
Cc07_g10910 Coffea canephora HOM05D006825 ORTHO05D008510 3.2e-72 275.4 174 77.0
DCAR_021509 Daucus carota HOM05D006825 ORTHO05D008510 4.2e-72 275.0 178 71.9
FvH4_1g11660 Fragaria vesca HOM05D006825 ORTHO05D008510 4.2e-72 275.0 182 70.9
Lj4A220T100 Lonicera japonica HOM05D006825 ORTHO05D008510 4.2e-72 275.0 174 75.9
MD15G1244000 Malus domestica HOM05D006825 ORTHO05D008510 7.1e-72 274.2 181 72.4
RcHm_v2.0_Chr2g0099251 Rosa chinensis HOM05D006825 ORTHO05D008510 7.1e-72 274.2 184 69.6
Gorai.003G008900 Gossypium raimondii HOM05D006825 ORTHO05D008510 1.2e-71 273.5 176 74.4
FAN28G2055 Fragaria x ananassa HOM05D006825 ORTHO05D008510 1.6e-71 273.1 182 70.3
FAN26G0347 Fragaria x ananassa HOM05D006825 ORTHO05D008510 3.5e-71 271.9 189 69.3
THA.LOC104821331 Tarenaya hassleriana HOM05D006825 ORTHO05D008510 3.5e-71 271.9 165 77.0
Sp2g30510 Schrenkiella parvula HOM05D006825 ORTHO05D008510 6.0e-71 271.2 170 74.1
Hund14052 Selenicereus undatus HOM05D006825 ORTHO05D008510 7.9e-71 270.8 182 70.3
AUR62029480 Chenopodium quinoa HOM05D006825 ORTHO05D008510 1.0e-70 270.4 179 72.6
CAN.G1817.4 Capsicum annuum HOM05D006825 ORTHO05D008510 1.3e-70 270.0 172 73.3
Ciclev10025798m.g Citrus clementina HOM05D006825 ORTHO05D008510 1.8e-70 269.6 175 72.6
CARHR281560 Cardamine hirsuta HOM05D006825 ORTHO05D008510 3.0e-70 268.9 169 74.0
HanXRQChr09g0256941 Helianthus annuus HOM05D006825 ORTHO05D008510 3.0e-70 268.9 180 70.6
AUR62003356 Chenopodium quinoa HOM05D006825 ORTHO05D008510 3.9e-70 268.5 178 71.9
Cpa.g.sc6.269 Carica papaya HOM05D006825 ORTHO05D008510 1.1e-69 266.9 165 77.0
Sc03g0003620 Simmondsia chinensis HOM05D006825 ORTHO05D008510 1.1e-69 266.9 171 73.1
TAR626G0952 Trochodendron aralioides HOM05D006825 ORTHO05D008510 1.1e-69 266.9 165 75.8
Aa31LG1G14680 Aethionema arabicum HOM05D006825 ORTHO05D008510 1.5e-69 266.5 169 72.8
vmacro22141 Vaccinium macrocarpon HOM05D006825 ORTHO05D008510 1.5e-69 266.5 175 72.6
EL10Ac6g15487 Beta vulgaris HOM05D006825 ORTHO05D008510 1.9e-69 266.2 165 75.2
BcaC03g18427 Brassica carinata HOM05D006825 ORTHO05D008510 2.5e-69 265.8 165 73.3
Lsat_1_v5_gn_4_145901 Lactuca sativa HOM05D006825 ORTHO05D008510 4.3e-69 265.0 180 71.7
MBI02_g07022_MAGBIO Magnolia biondii HOM05D006825 ORTHO05D008510 5.7e-69 264.6 165 73.9
BolC2t12557H Brassica oleracea HOM05D006825 ORTHO05D008510 7.4e-69 264.2 165 72.7
Rhsim10G0211100 Rhododendron simsii HOM05D006825 ORTHO05D008510 7.4e-69 264.2 174 72.4
GSVIVG01018762001 Vitis vinifera HOM05D006825 ORTHO05D008510 7.4e-69 264.2 181 71.8
CsaV3_6G047250 Cucumis sativus L. HOM05D006825 ORTHO05D008510 1.3e-68 263.5 177 70.1
Eucgr.I02337 Eucalyptus grandis HOM05D006825 ORTHO05D008510 1.3e-68 263.5 185 69.2
A02p44590 Brassica napus HOM05D006825 ORTHO05D008510 1.6e-68 263.1 165 72.7
BraA02t09375Z Brassica rapa HOM05D006825 ORTHO05D008510 1.6e-68 263.1 165 72.7
PGSC0003DMG400022529 Solanum tuberosum HOM05D006825 ORTHO05D008510 1.6e-68 263.1 172 72.1
Thhalv10004380m.g Eutrema salsugineum HOM05D006825 ORTHO05D008510 4.8e-68 261.5 165 73.3
Oeu053236.1 Olea europaea HOM05D006825 ORTHO05D008510 6.3e-68 261.2 169 73.4
Sed0006507 Sechium edule HOM05D000348 ORTHO05D000244 8.2e-68 260.8 176 69.9
Manes.01G148100 Manihot esculenta HOM05D006825 ORTHO05D008510 1.1e-67 260.4 176 72.2
Nn3g20374 Nelumbo nucifera HOM05D006825 ORTHO05D008510 1.1e-67 260.4 165 73.9
Aqoxy2G04041 Aquilegia oxysepala HOM05D006825 ORTHO05D008510 1.4e-67 260.0 177 68.9
Os02g0320100 Oryza sativa ssp. japonica HOM05D006825 ORTHO05D008510 1.8e-67 259.6 173 68.2
AT5G66180 Arabidopsis thaliana HOM05D006825 ORTHO05D008510 2.4e-67 259.2 165 72.7
Solyc03g033450.4 Solanum lycopersicum HOM05D006825 ORTHO05D008510 4.1e-67 258.5 172 70.9
MSTRG.14307 Avicennia marina HOM05D006825 ORTHO05D008510 5.3e-67 258.1 180 69.4
MELO3C007916.2 Cucumis melo HOM05D006825 ORTHO05D008510 6.9e-67 257.7 187 67.4
AL8G45350 Arabidopsis lyrata HOM05D006825 ORTHO05D008510 1.5e-66 256.5 165 71.5
PGR119G0791 Punica granatum HOM05D006825 ORTHO05D008510 3.4e-66 255.4 170 68.8
Carub.0008s2832 Capsella rubella HOM05D006825 ORTHO05D008510 1.0e-65 253.8 164 69.5
TWI09G1238 Tripterygium wilfordii HOM05D006825 ORTHO05D008510 3.8e-65 251.9 188 66.0
Zm00001eb417020 Zea mays HOM05D006825 ORTHO05D008510 6.5e-65 251.1 169 68.6
ClCG01G020380 Citrullus lanatus HOM05D000348 ORTHO05D000244 1.1e-64 250.4 200 62.0
CDE01G0266 Ceratophyllum demersum HOM05D006825 ORTHO05D008510 3.2e-64 248.8 165 67.9
ATR1098G103 Amborella trichopoda HOM05D006825 ORTHO05D008510 1.6e-63 246.5 165 69.1
Migut.H02145 Erythranthe guttata HOM05D006825 ORTHO05D008510 1.6e-63 246.5 176 68.2
PSO675G9026 Papaver somniferum HOM05D006825 ORTHO05D008510 1.4e-62 243.4 182 63.7
HPP92_013273 Vanilla planifolia HOM05D006825 ORTHO05D008510 1.4e-62 243.4 173 66.5
PSO541G4668 Papaver somniferum HOM05D006825 ORTHO05D008510 1.8e-62 243.0 171 66.7
unitig_744.g24494 Utricularia gibba HOM05D000120 ORTHO05D008510 1.8e-62 243.0 173 65.3
SGA_v2.0_scaffold80G25916 Striga asiatica HOM05D006825 ORTHO05D008510 9.7e-61 237.3 171 67.3
Actinidia17432 Actinidia chinensis HOM05D006825 ORTHO05D008510 4.5e-58 228.4 138 78.3
Ah.03g148930 Amaranthus hybridus HOM05D006825 ORTHO05D008510 1.7e-57 226.5 180 61.1
SHI46760 Sapria himalayana HOM05D006825 ORTHO05D008510 5.0e-57 224.9 195 58.5
SEGI_17861 Sequoiadendron giganteum HOM05D006825 ORTHO05D008510 2.5e-56 222.6 158 67.1
FAN23G1707 Fragaria x ananassa HOM05D000348 ORTHO05D000244 9.7e-53 210.7 203 57.1
Psat4g100720 Pisum sativum HOM05D006825 ORTHO05D008510 1.3e-52 210.3 121 82.6
Pp3c17_24030 Physcomitrium patens HOM05D006825 ORTHO05D008510 1.7e-52 209.9 167 61.7
SMO347G0256 Selaginella moellendorffii HOM05D006825 ORTHO05D008510 1.1e-48 197.2 178 53.9
CBR_g38194 Chara braunii HOM05D006825 ORTHO05D008510 1.6e-47 193.4 166 59.0
Mapoly0052s0057 Marchantia polymorpha HOM05D006825 ORTHO05D008510 2.3e-46 189.5 138 68.1
SalBow7G2494 Salvia bowleyana HOM05D006825 ORTHO05D008510 1.7e-44 183.3 138 65.9
AagrBONN_evm.TU.Sc2ySwM_344.4862 Anthoceros agrestis HOM05D006825 ORTHO05D008510 6.5e-41 171.4 149 55.0
ECA232G1215 Erigeron canadensis HOM05D006825 ORTHO05D008510 1.2e-34 150.6 96 72.9
Sopen03g006200 Solanum pennellii HOM05D006825 ORTHO05D008510 4.5e-34 148.7 94 77.7
ECA232G4867 Erigeron canadensis HOM05D006825 ORTHO05D008510 1.7e-25 120.2 90 64.4
SEGI_38048 Sequoiadendron giganteum HOM05D006825 ORTHO05D008510 3.1e-19 99.4 62 72.6
SEGI_39386 Sequoiadendron giganteum HOM05D006825 ORTHO05D008510 2.7e-18 96.3 82 54.9
Medtr8g075450 Medicago truncatula HOM05D006825 ORTHO05D048890 9.2e-11 71.2 40 82.5
PSO210G2988 Papaver somniferum HOM05D004621 ORTHO05D005817 3.1e-06 56.2 115 31.3
Atru.chr6.2520 Acer truncatum HOM05D006825 ORTHO05D008510 4.0e-06 55.8 30 76.7
Os02g0217800 Oryza sativa ssp. japonica HOM05D004621 ORTHO05D005817 5.2e-06 55.5 127 28.3
TAR624G1267 Trochodendron aralioides HOM05D004621 ORTHO05D005817 8.9e-06 54.7 122 27.9


User provided reference genes

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