Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8391 Trifolium pratense HOM05D007325 ORTHO05D009251 4.8e-80 301.2 163 100.0
Medtr7g111170 Medicago truncatula HOM05D007325 ORTHO05D009251 2.0e-38 162.9 118 74.6
Medtr7g111180 Medicago truncatula HOM05D007325 ORTHO05D009251 2.7e-38 162.5 117 75.2
Glyma.03G226900 Glycine max HOM05D007325 ORTHO05D009251 1.1e-23 114.0 118 60.2
VMungo1383G0662 Vigna mungo HOM05D007325 ORTHO05D009251 4.1e-23 112.1 122 58.2
Phvul.001G220700 Phaseolus vulgaris HOM05D007325 ORTHO05D009251 2.0e-22 109.8 126 56.3
Psat0s4029g0040 Pisum sativum HOM05D007325 ORTHO05D009251 5.9e-22 108.2 101 61.4
Lalb_Chr04g0260261 Lupinus albus HOM05D007325 ORTHO05D009251 6.1e-19 98.2 110 58.2
Lj1g0016832 Lotus japonicus HOM05D007325 ORTHO05D009251 1.8e-18 96.7 131 50.4
Glyma.19G223800 Glycine max HOM05D007325 ORTHO05D009251 4.4e-17 92.0 107 57.0
Psat6g156800 Pisum sativum HOM05D007325 ORTHO05D009251 1.3e-16 90.5 87 62.1
Lalb_Chr02g0147341 Lupinus albus HOM05D007325 ORTHO05D009251 2.2e-16 89.7 84 61.9
Lalb_Chr21g0309941 Lupinus albus HOM05D007325 ORTHO05D009251 1.9e-15 86.7 83 57.8
Lalb_Chr06g0167201 Lupinus albus HOM05D007325 ORTHO05D009251 4.1e-15 85.5 84 57.1
Glyma.20G089800 Glycine max HOM05D007325 ORTHO05D009251 5.4e-15 85.1 114 50.0
TPR.G3077 Trifolium pratense HOM05D007325 ORTHO05D009251 7.0e-15 84.7 94 58.5
Medtr1g085240 Medicago truncatula HOM05D007325 ORTHO05D009251 1.6e-14 83.6 113 52.2
arahy.Tifrunner.gnm1.ann1.Y42B53 Arachis hypogaea HOM05D007325 ORTHO05D009251 7.8e-14 81.3 119 47.9
arahy.Tifrunner.gnm1.ann1.GPC6YY Arachis hypogaea HOM05D007325 ORTHO05D009251 5.0e-13 78.6 103 53.4
Lj5g0004840 Lotus japonicus HOM05D007325 ORTHO05D009251 5.0e-13 78.6 116 49.1
VMungo0720G0176 Vigna mungo HOM05D003267 ORTHO05D003955 8.6e-13 77.8 116 46.6
Phvul.007G207000 Phaseolus vulgaris HOM05D007325 ORTHO05D009251 1.9e-12 76.6 89 51.7
QL03p011419 Quercus lobata HOM05D007325 ORTHO05D009251 1.9e-12 76.6 83 55.4
Glyma.10G141100 Glycine max HOM05D007325 ORTHO05D009251 9.5e-12 74.3 115 47.8
Manes.08G105900 Manihot esculenta HOM05D007325 ORTHO05D009251 1.8e-10 70.1 95 53.7
MD04G1183600 Malus domestica HOM05D007325 ORTHO05D009251 2.0e-09 66.6 101 45.5
Gohir.D13G117300 Gossypium hirsutum HOM05D007325 ORTHO05D009251 2.6e-09 66.2 101 48.5
Potri.005G000700 Populus trichocarpa HOM05D007325 ORTHO05D009251 2.6e-09 66.2 138 41.3
Cfa004401 Carpinus fangiana HOM05D008494 ORTHO05D010021 3.4e-09 65.9 113 44.2
Gohir.A13G114400 Gossypium hirsutum HOM05D007325 ORTHO05D009251 3.4e-09 65.9 101 48.5
MD12G1197000 Malus domestica HOM05D007325 ORTHO05D009251 3.4e-09 65.9 125 44.0
Atru.chr12.1499 Acer truncatum HOM05D007325 ORTHO05D009251 4.4e-09 65.5 101 43.6
Prupe.6G302100 Prunus persica HOM05D007325 ORTHO05D009251 4.4e-09 65.5 117 42.7
Thecc.05G331600 Theobroma cacao HOM05D007325 ORTHO05D009251 4.4e-09 65.5 83 51.8
Cc02_g36910 Coffea canephora HOM05D007325 ORTHO05D009251 5.8e-09 65.1 86 48.8
Lj5P313T22 Lonicera japonica HOM05D007325 ORTHO05D009251 5.8e-09 65.1 107 45.8
PGR119G2017 Punica granatum HOM05D007325 ORTHO05D009251 5.8e-09 65.1 99 43.4
Gorai.013G131900 Gossypium raimondii HOM05D007325 ORTHO05D009251 2.9e-08 62.8 101 47.5
Potri.005G000401 Populus trichocarpa HOM05D007325 ORTHO05D009251 2.9e-08 62.8 100 46.0
Manes.09G182800 Manihot esculenta HOM05D007325 ORTHO05D009251 3.7e-08 62.4 89 51.7
Migut.B00680 Erythranthe guttata HOM05D007325 ORTHO05D009251 8.3e-08 61.2 55 61.8
PGSC0003DMG400018232 Solanum tuberosum HOM05D007325 ORTHO05D009251 8.3e-08 61.2 76 52.6
CSS0011097 Camellia sinensis var. sinensis HOM05D007325 ORTHO05D009251 1.4e-07 60.5 98 49.0
Carub.0006s2420 Capsella rubella HOM05D007325 ORTHO05D009251 1.9e-07 60.1 78 44.9
Eucgr.H01350 Eucalyptus grandis HOM05D007325 ORTHO05D009251 4.1e-07 58.9 85 49.4
FAN09G1210 Fragaria x ananassa HOM05D007325 ORTHO05D009251 4.1e-07 58.9 95 45.3
Lj9P239T47 Lonicera japonica HOM05D007325 ORTHO05D009251 4.1e-07 58.9 69 52.2
CANSAT54G2629 Cannabis sativa HOM05D007325 ORTHO05D009251 7.1e-07 58.2 98 44.9
Dinv24533 Davidia involucrata HOM05D003267 ORTHO05D003955 7.1e-07 58.2 91 47.3
RcHm_v2.0_Chr3g0459051 Rosa chinensis HOM05D007325 ORTHO05D009251 7.1e-07 58.2 117 41.0
Ciclev10030031m.g Citrus clementina HOM05D007325 ORTHO05D009251 1.2e-06 57.4 77 45.5
FAN14G5110 Fragaria x ananassa HOM05D007325 ORTHO05D009251 1.2e-06 57.4 67 53.7
Lsat_1_v5_gn_9_83741 Lactuca sativa HOM05D007325 ORTHO05D009251 2.1e-06 56.6 95 41.1
Dinv30961 Davidia involucrata HOM05D007325 ORTHO05D009251 3.5e-06 55.8 66 57.6
FAN02G3982 Fragaria x ananassa HOM05D007325 ORTHO05D009251 3.5e-06 55.8 95 44.2
FAN05G0265 Fragaria x ananassa HOM05D007325 ORTHO05D009251 3.5e-06 55.8 95 44.2
FAN05G4266 Fragaria x ananassa HOM05D007325 ORTHO05D009251 3.5e-06 55.8 95 44.2
AL6G38400 Arabidopsis lyrata HOM05D007325 ORTHO05D009251 4.6e-06 55.5 65 49.2


User provided reference genes

Program Settings