Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 9.8e-113 410.2 218 100.0
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 3.2e-39 166.0 226 49.6
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 1.6e-35 153.7 194 51.5
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 6.5e-32 141.7 230 47.4
Psat4g227520 Pisum sativum HOM05D006273 ORTHO05D007607 9.4e-31 137.9 217 49.3
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 3.2e-23 112.8 217 45.2
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 9.4e-23 111.3 204 43.1
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 1.0e-21 107.8 253 41.9
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 1.4e-21 107.5 235 42.1
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 1.8e-21 107.1 202 45.5
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 3.0e-21 106.3 242 38.0
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 5.2e-21 105.5 226 39.4
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 5.2e-21 105.5 140 50.7
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 5.2e-21 105.5 240 41.7
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 1.7e-19 100.5 223 40.8
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 8.2e-19 98.2 111 54.1
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 1.4e-18 97.4 213 43.2
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 1.4e-18 97.4 146 47.3
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 5.3e-18 95.5 255 35.3
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 9.1e-18 94.7 216 38.0
Medtr5g005040 Medicago truncatula HOM05D006273 ORTHO05D007607 5.9e-17 92.0 161 42.2
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 1.7e-16 90.5 145 44.1
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 2.2e-16 90.1 257 31.9
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 1.5e-15 87.4 142 43.0
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.5e-15 87.4 266 32.7
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 4.2e-15 85.9 266 32.3
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 7.2e-15 85.1 266 32.3
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 1.6e-14 84.0 262 33.2
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.1e-14 83.6 259 30.5
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.1e-14 83.6 259 30.5
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.7e-14 83.2 268 31.0
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 2.7e-14 83.2 152 39.5
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 4.7e-14 82.4 253 32.0
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 4.7e-14 82.4 253 33.2
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 1.0e-13 81.3 129 41.1
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 1.8e-13 80.5 240 34.6
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 2.3e-13 80.1 262 31.7
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.3e-13 80.1 161 36.0
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 4.0e-13 79.3 255 34.5
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 6.7e-13 78.6 163 33.7
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 2.0e-12 77.0 263 31.9
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 2.0e-12 77.0 261 31.0
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 2.6e-12 76.6 211 36.0
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 3.3e-12 76.3 270 32.6
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 4.4e-12 75.9 263 29.3
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 1.7e-11 73.9 159 36.5
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 2.8e-11 73.2 260 29.6
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 4.8e-11 72.4 260 29.6
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 1.1e-10 71.2 202 37.1
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 1.1e-10 71.2 161 37.3
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 3.1e-10 69.7 241 34.0
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 5.3e-10 68.9 268 32.1
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 9.1e-10 68.2 244 30.3
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 9.1e-10 68.2 253 31.6
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 1.6e-09 67.4 272 31.6
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 1.6e-09 67.4 151 39.1
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 7.7e-09 65.1 263 30.0
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 1.7e-08 63.9 286 29.0
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 2.2e-08 63.5 206 28.6
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 2.9e-08 63.2 142 35.2
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 5.0e-08 62.4 214 30.8
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 6.5e-08 62.0 153 37.9
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 6.5e-08 62.0 161 34.2
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 8.5e-08 61.6 268 32.5
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.9e-07 60.5 247 30.4
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 5.5e-07 58.9 180 32.2
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 1.2e-06 57.8 122 39.3
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 1.2e-06 57.8 251 28.7
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 1.2e-06 57.8 242 29.8
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 1.6e-06 57.4 260 28.1
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 6.1e-06 55.5 153 30.7


User provided reference genes

Program Settings