Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 0.0e+00 1210.7 642 100.0
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 6.9e-300 1033.5 641 86.6
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 2.7e-296 1021.5 634 85.8
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 3.0e-263 911.8 644 76.9
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 2.0e-254 882.5 642 74.5
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.1e-252 876.7 643 74.2
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 1.5e-249 866.3 645 73.3
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 1.0e-242 843.6 645 72.4
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 3.1e-239 832.0 643 71.7
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 3.2e-220 768.8 474 86.3
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 4.6e-211 738.4 646 63.6
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 1.5e-206 723.4 650 62.6
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 2.9e-205 719.2 643 62.4
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.6e-200 703.4 637 61.2
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.6e-200 703.4 637 61.5
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 6.3e-200 701.4 655 60.9
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 1.2e-198 697.2 639 61.8
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 3.4e-198 695.7 643 61.7
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 2.9e-197 692.6 639 60.7
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 1.6e-195 686.8 640 60.5
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 1.3e-194 683.7 643 61.1
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 4.8e-192 675.2 642 60.0
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 6.3e-192 674.9 642 59.8
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.1e-191 674.1 648 60.5
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 4.1e-191 672.2 646 60.2
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 5.3e-191 671.8 649 59.8
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 7.7e-190 667.9 649 59.5
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 1.0e-189 667.5 664 57.5
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 6.5e-189 664.8 626 60.5
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 4.2e-188 662.1 652 58.1
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 5.5e-188 661.8 648 57.9
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 1.2e-187 660.6 684 56.4
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 1.4e-186 657.1 637 59.3
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.0e-185 653.3 651 57.6
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 2.0e-185 653.3 654 58.0
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 2.4e-183 646.4 656 56.2
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 3.1e-183 646.0 627 59.0
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 4.1e-183 645.6 633 58.9
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 5.9e-182 641.7 637 57.6
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 7.7e-182 641.3 448 78.1
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 5.5e-180 635.2 711 53.3
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.4e-178 630.6 666 54.7
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 1.4e-178 630.6 666 54.7
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 8.8e-178 627.9 643 55.7
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 1.1e-177 627.5 614 58.0
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 1.1e-177 627.5 672 56.2
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 4.5e-174 615.5 638 56.7
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 7.7e-174 614.8 652 53.8
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 8.5e-173 611.3 749 49.9
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 5.7e-169 598.6 647 53.3
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 5.7e-169 598.6 792 48.5
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 1.2e-166 590.9 641 53.7
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 5.9e-166 588.6 680 54.1
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 2.2e-165 586.6 517 63.4
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 2.2e-165 586.6 639 53.8
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 2.9e-165 586.3 635 53.1
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 5.0e-165 585.5 597 56.8
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 3.2e-164 582.8 636 52.4
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 4.2e-164 582.4 646 53.3
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 5.2e-162 575.5 640 52.8
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 1.2e-161 574.3 634 52.7
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 1.5e-161 573.9 649 53.8
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 2.0e-161 573.5 640 52.8
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 3.7e-160 569.3 634 51.6
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 8.3e-160 568.2 600 55.5
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 2.2e-157 560.1 637 51.0
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 1.1e-156 557.8 665 49.8
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 1.6e-155 553.9 655 50.5
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 1.0e-154 551.2 664 49.7
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 1.0e-154 551.2 664 49.5
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 1.2e-153 547.7 687 48.8
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 4.4e-153 545.8 654 49.8
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 1.7e-152 543.9 664 49.1
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 6.3e-152 542.0 640 49.8
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 3.1e-151 539.7 659 50.4
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 3.1e-151 539.7 651 51.2
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 4.1e-151 539.3 627 52.5
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 5.4e-151 538.9 635 50.2
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 1.7e-149 533.9 688 47.7
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 8.0e-147 525.0 517 57.1
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 2.4e-143 513.5 642 48.0
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 9.8e-137 491.5 439 62.9
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 5.4e-135 485.7 646 46.4
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 1.2e-134 484.6 626 47.6
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 6.2e-131 472.2 602 48.7
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 2.9e-128 463.4 422 62.3
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.1e-127 461.5 665 44.7
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 8.4e-120 435.3 649 43.9
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 1.4e-119 434.5 475 54.7
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 3.2e-119 433.3 703 41.0
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 2.3e-117 427.2 523 49.1
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 4.3e-116 422.9 656 41.8
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 3.6e-115 419.9 646 44.6
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 1.5e-108 397.9 647 40.8
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 1.4e-106 391.3 503 49.1
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 4.5e-105 386.3 668 39.1
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 2.7e-102 377.1 494 45.3
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 6.0e-102 375.9 634 38.6
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.1e-100 371.7 656 38.4
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.8e-98 364.4 455 48.4
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 3.4e-97 360.1 423 51.8
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 5.5e-79 299.7 842 33.0
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 5.5e-71 273.1 208 69.7
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.8e-67 260.8 310 53.9
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 1.8e-66 258.1 505 37.0
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 2.3e-61 241.1 165 77.0
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 5.2e-61 240.0 333 47.7
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 2.0e-57 228.0 212 60.4
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 2.2e-56 224.6 734 29.6
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 1.1e-55 222.2 806 27.5
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 3.2e-55 220.7 266 53.4
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 1.6e-54 218.4 320 46.2
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 2.6e-52 211.1 150 76.0
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 2.9e-48 197.6 144 70.1
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 4.5e-41 173.7 217 46.5
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 3.8e-40 170.6 196 50.0
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 6.1e-30 136.7 176 40.3
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 2.4e-26 124.8 101 65.3
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 3.3e-23 114.4 94 70.2
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 9.5e-23 112.8 103 63.1
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.1e-21 109.4 90 73.3
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 1.2e-20 105.9 73 69.9
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.5e-12 79.0 116 41.4
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 1.7e-11 75.5 45 77.8
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 8.3e-11 73.2 47 74.5
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 2.1e-09 68.6 86 44.2
SHI04983 Sapria himalayana HOM05D000023 ORTHO05D000014 3.5e-09 67.8 122 41.0
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.3e-08 65.9 94 39.4
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 1.5e-07 62.4 58 62.1
CSS0040212 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D007190 2.5e-07 61.6 41 78.0


User provided reference genes

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