Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8253 Trifolium pratense HOM05D000552 ORTHO05D000469 1.9e-44 182.2 94 100.0
Psat5g299560 Pisum sativum HOM05D000552 ORTHO05D000469 1.3e-24 116.3 76 81.6
Medtr2g102550 Medicago truncatula HOM05D000552 ORTHO05D000469 2.6e-22 108.6 71 80.3
Ca_01100_v3 Cicer arietinum L. HOM05D000552 ORTHO05D000469 2.5e-20 102.1 74 73.0
Psat6g019240 Pisum sativum HOM05D004506 ORTHO05D000469 4.2e-20 101.3 63 82.5
Medtr2g102520 Medicago truncatula HOM05D000552 ORTHO05D000469 1.2e-19 99.8 74 75.7
arahy.Tifrunner.gnm1.ann1.H4MKL1 Arachis hypogaea HOM05D000552 ORTHO05D000469 2.3e-18 95.5 75 70.7
arahy.Tifrunner.gnm1.ann1.880Q5H Arachis hypogaea HOM05D000552 ORTHO05D000469 3.9e-18 94.7 75 69.3
Lj3g0020495 Lotus japonicus HOM05D000552 ORTHO05D000469 3.7e-16 88.2 73 65.8
VMungo0331G0634 Vigna mungo HOM05D000552 ORTHO05D000469 6.3e-16 87.4 78 56.4
Glyma.07G034100 Glycine max HOM05D000552 ORTHO05D000469 4.1e-15 84.7 79 58.2
arahy.Tifrunner.gnm1.ann1.6X58XW Arachis hypogaea HOM05D000552 ORTHO05D000469 1.5e-14 82.8 80 52.5
arahy.Tifrunner.gnm1.ann1.8L521W Arachis hypogaea HOM05D000552 ORTHO05D000469 1.5e-14 82.8 80 52.5
Phvul.010G151900 Phaseolus vulgaris HOM05D000552 ORTHO05D000469 7.7e-14 80.5 78 53.8
Glyma.08G208000 Glycine max HOM05D000552 ORTHO05D000469 1.3e-13 79.7 79 57.0
Lalb_Chr22g0351131 Lupinus albus HOM05D000552 ORTHO05D000469 1.3e-13 79.7 78 55.1
Lalb_Chr01g0012561 Lupinus albus HOM05D000552 ORTHO05D000469 2.5e-12 75.5 80 53.8
Prupe.3G075200 Prunus persica HOM05D000552 ORTHO05D000469 3.2e-12 75.1 80 47.5
MD17G1198500 Malus domestica HOM05D000552 ORTHO05D000469 5.5e-12 74.3 80 50.0
MD09G1216400 Malus domestica HOM05D000552 ORTHO05D000469 2.1e-11 72.4 86 44.2
Lalb_Chr04g0262591 Lupinus albus HOM05D000552 ORTHO05D000469 4.6e-11 71.2 80 48.8
Duzib235G0186 Durio zibethinus HOM05D000552 ORTHO05D000469 1.4e-10 69.7 85 52.9
TWI12G0347 Tripterygium wilfordii HOM05D000552 ORTHO05D000469 3.9e-10 68.2 70 55.7
CiPaw.02G152900 Carya illinoinensis HOM05D000552 ORTHO05D000469 1.1e-09 66.6 85 50.6
RcHm_v2.0_Chr2g0137271 Rosa chinensis HOM05D000552 ORTHO05D000469 1.1e-09 66.6 82 46.3
COL.COLO4_30320 Corchorus olitorius HOM05D000552 ORTHO05D000469 2.0e-09 65.9 84 50.0
CSS0035189 Camellia sinensis var. sinensis HOM05D000552 ORTHO05D037995 3.3e-09 65.1 84 46.4
Thecc.06G081600 Theobroma cacao HOM05D000552 ORTHO05D000469 3.3e-09 65.1 85 51.8
Gohir.A09G084400 Gossypium hirsutum HOM05D000552 ORTHO05D000469 4.3e-09 64.7 80 51.2
TAR636G0678 Trochodendron aralioides HOM05D000552 ORTHO05D000469 4.3e-09 64.7 84 46.4
QL05p025674 Quercus lobata HOM05D000552 ORTHO05D000469 5.7e-09 64.3 84 47.6
Gohir.D09G084200 Gossypium hirsutum HOM05D000552 ORTHO05D000469 7.4e-09 63.9 80 51.2
Gorai.006G100200 Gossypium raimondii HOM05D000552 ORTHO05D000469 7.4e-09 63.9 80 51.2
FvH4_6g30830 Fragaria vesca HOM05D000552 ORTHO05D000469 1.7e-08 62.8 80 46.2
FAN14G2242 Fragaria x ananassa HOM05D000552 ORTHO05D000469 2.2e-08 62.4 79 46.8
TAR383G0984 Trochodendron aralioides HOM05D000552 ORTHO05D000469 2.2e-08 62.4 86 46.5
CSS0032404 Camellia sinensis var. sinensis HOM05D000552 ORTHO05D000469 2.8e-08 62.0 80 45.0
Duzib160G0205 Durio zibethinus HOM05D000552 ORTHO05D000469 3.7e-08 61.6 83 50.6
Manes.04G120600 Manihot esculenta HOM05D000552 ORTHO05D000469 3.7e-08 61.6 74 50.0
SGA_v2.0_scaffold27G11486 Striga asiatica HOM05D000552 ORTHO05D000469 4.8e-08 61.2 74 47.3
FAN09G3139 Fragaria x ananassa HOM05D000552 ORTHO05D000469 8.2e-08 60.5 80 46.2
Potri.018G034100 Populus trichocarpa HOM05D000552 ORTHO05D000469 8.2e-08 60.5 89 44.9
FAN05G5316 Fragaria x ananassa HOM05D000552 ORTHO05D000469 1.1e-07 60.1 80 45.0
Hma1.2p1_0317F.1_g123240 Hydrangea macrophylla HOM05D000552 ORTHO05D000469 1.1e-07 60.1 87 47.1
Gohir.A10G078700 Gossypium hirsutum HOM05D000552 ORTHO05D000469 1.4e-07 59.7 85 52.9
Sed0010399 Sechium edule HOM05D000552 ORTHO05D000469 1.4e-07 59.7 87 47.1
ClCG09G002380 Citrullus lanatus HOM05D000552 ORTHO05D000469 1.8e-07 59.3 74 48.6
Gorai.011G078400 Gossypium raimondii HOM05D000552 ORTHO05D000469 1.8e-07 59.3 85 52.9
SalBow4G1490 Salvia bowleyana HOM05D000552 ORTHO05D000469 1.8e-07 59.3 72 47.2
MELO3C023372.2 Cucumis melo HOM05D000552 ORTHO05D000469 2.4e-07 58.9 74 48.6
Gohir.D10G072800 Gossypium hirsutum HOM05D000552 ORTHO05D000469 2.4e-07 58.9 85 52.9
Potri.006G247200 Populus trichocarpa HOM05D000552 ORTHO05D000469 2.4e-07 58.9 82 43.9
FAN02G3566 Fragaria x ananassa HOM05D000552 ORTHO05D000469 3.1e-07 58.5 80 43.8
MELO3C003672.2 Cucumis melo HOM05D000552 ORTHO05D000469 5.3e-07 57.8 81 48.1
Migut.A00279 Erythranthe guttata HOM05D000552 ORTHO05D000469 5.3e-07 57.8 74 44.6
Eucgr.C02858 Eucalyptus grandis HOM05D000552 ORTHO05D000469 5.3e-07 57.8 76 46.1
Sabra06G0193400 Salix brachista HOM05D000552 ORTHO05D000469 5.3e-07 57.8 85 43.5
Sabra18G0034800 Salix brachista HOM05D000552 ORTHO05D000469 5.3e-07 57.8 85 45.9
Actinidia01787 Actinidia chinensis HOM05D000552 ORTHO05D056384 9.1e-07 57.0 87 44.8
SGA_v2.0_scaffold448G51782 Striga asiatica HOM05D000552 ORTHO05D000469 9.1e-07 57.0 74 44.6
MSTRG.13997 Avicennia marina HOM05D000552 ORTHO05D000469 1.2e-06 56.6 74 47.3
Potri.001G177100 Populus trichocarpa HOM05D000552 ORTHO05D000469 1.2e-06 56.6 84 45.2
CsaV3_3G046660 Cucumis sativus L. HOM05D000552 ORTHO05D000469 1.5e-06 56.2 81 48.1
Rhsim02G0188000 Rhododendron simsii HOM05D000552 ORTHO05D000469 1.5e-06 56.2 74 43.2
Sed0006298 Sechium edule HOM05D000552 ORTHO05D000469 1.5e-06 56.2 73 49.3
Actinidia15821 Actinidia chinensis HOM05D000552 ORTHO05D000469 2.0e-06 55.8 68 47.1
ClCG05G017180 Citrullus lanatus HOM05D000552 ORTHO05D000469 2.0e-06 55.8 81 45.7
Cc08_g08360 Coffea canephora HOM05D000552 ORTHO05D000469 2.6e-06 55.5 74 44.6
QL12p031365 Quercus lobata HOM05D000552 ORTHO05D000469 2.6e-06 55.5 85 43.5
Atru.chr7.2330 Acer truncatum HOM05D000552 ORTHO05D000469 4.5e-06 54.7 87 47.1
Actinidia13427 Actinidia chinensis HOM05D000552 ORTHO05D037995 4.5e-06 54.7 79 41.8
CsaV3_7G032940 Cucumis sativus L. HOM05D000552 ORTHO05D000469 4.5e-06 54.7 70 48.6
Oeu045180.1 Olea europaea HOM05D000552 ORTHO05D000469 4.5e-06 54.7 70 45.7
Prupe.1G467200 Prunus persica HOM05D000552 ORTHO05D000469 4.5e-06 54.7 87 44.8
vmacro11121 Vaccinium macrocarpon HOM05D000552 ORTHO05D000469 5.9e-06 54.3 80 43.8
CiPaw.08G015200 Carya illinoinensis HOM05D000552 ORTHO05D000469 7.7e-06 53.9 75 44.0


User provided reference genes

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