Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G824 Trifolium pratense HOM05D002090 ORTHO05D001923 2.2e-90 335.5 158 100.0
TPR.G31936 Trifolium pratense HOM05D002090 ORTHO05D001923 1.6e-27 126.7 174 38.5
TPR.G2805 Trifolium pratense HOM05D002090 ORTHO05D001923 7.8e-27 124.4 174 37.4
Glyma.02G178600 Glycine max HOM05D002090 ORTHO05D001923 2.3e-26 122.9 175 37.1
Glyma.18G142200 Glycine max HOM05D002090 ORTHO05D001923 4.3e-25 118.6 162 38.9
Glyma.03G083300 Glycine max HOM05D002090 ORTHO05D001923 9.5e-25 117.5 180 35.0
Glyma.13G025000 Glycine max HOM05D002090 ORTHO05D001923 1.6e-24 116.7 173 37.6
Glyma.19G107800 Glycine max HOM05D002090 ORTHO05D001923 4.7e-24 115.2 173 35.3
Medtr3g055660 Medicago truncatula HOM05D002090 ORTHO05D001923 4.7e-24 115.2 172 35.5
Medtr5g053590 Medicago truncatula HOM05D002090 ORTHO05D001923 4.7e-24 115.2 174 35.1
TPR.G15973 Trifolium pratense HOM05D001685 ORTHO05D007488 4.7e-24 115.2 174 34.5
Medtr4g014890 Medicago truncatula HOM05D002090 ORTHO05D001923 8.0e-24 114.4 172 35.5
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 1.8e-23 113.2 179 34.1
Glyma.09G080300 Glycine max HOM05D002090 ORTHO05D001923 1.2e-22 110.5 141 40.4
Glyma.09G106000 Glycine max HOM05D002090 ORTHO05D001923 1.2e-22 110.5 178 36.0
Medtr6g059860 Medicago truncatula HOM05D002090 ORTHO05D001923 1.5e-22 110.2 172 34.9
Glyma.07G223800 Glycine max HOM05D002090 ORTHO05D001923 7.5e-22 107.8 160 37.5
Medtr6g045290 Medicago truncatula HOM05D000336 ORTHO05D002705 1.7e-21 106.7 164 29.9
Glyma.01G071100 Glycine max HOM05D002090 ORTHO05D001923 2.2e-21 106.3 178 34.3
Glyma.03G056600 Glycine max HOM05D002090 ORTHO05D001923 3.7e-21 105.5 176 34.7
Glyma.20G053800 Glycine max HOM05D002090 ORTHO05D001923 4.9e-21 105.1 160 37.5
Glyma.20G065700 Glycine max HOM05D002090 ORTHO05D001923 8.3e-21 104.4 183 33.9
Glyma.15G206600 Glycine max HOM05D002090 ORTHO05D001923 1.1e-20 104.0 176 35.2
Glyma.07G214000 Glycine max HOM05D002090 ORTHO05D001923 1.9e-20 103.2 178 33.7
Glyma.15G235800 Glycine max HOM05D002090 ORTHO05D001923 3.2e-20 102.4 157 36.9
Glyma.08G253400 Glycine max HOM05D002090 ORTHO05D001923 5.4e-20 101.7 154 36.4
Glyma.13G028600 Glycine max HOM05D002090 ORTHO05D001923 5.4e-20 101.7 157 35.0
TPR.G13259 Trifolium pratense HOM05D002090 ORTHO05D001923 5.4e-20 101.7 174 31.0
Glyma.03G121900 Glycine max HOM05D002090 ORTHO05D001923 7.0e-20 101.3 154 36.4
Medtr5g004860 Medicago truncatula HOM05D002090 ORTHO05D001923 9.2e-20 100.9 175 30.9
Medtr4g085760 Medicago truncatula HOM05D002090 ORTHO05D001923 1.2e-19 100.5 174 33.9
Psat0s3648g0040 Pisum sativum HOM05D002090 ORTHO05D001923 1.2e-19 100.5 172 33.1
Medtr2g450060 Medicago truncatula HOM05D002090 ORTHO05D001923 1.6e-19 100.1 175 29.7
Medtr8g027910 Medicago truncatula HOM05D002090 ORTHO05D001923 3.5e-19 99.0 178 30.3
TPR.G21225 Trifolium pratense HOM05D002090 ORTHO05D001923 3.5e-19 99.0 132 38.6
Medtr7g025160 Medicago truncatula HOM05D002090 ORTHO05D001923 6.0e-19 98.2 167 29.9
Glyma.13G029300 Glycine max HOM05D002090 ORTHO05D001923 1.3e-18 97.1 154 34.4
Glyma.13G075500 Glycine max HOM05D002090 ORTHO05D001923 1.3e-18 97.1 156 35.3
Lalb_Chr11g0064711 Lupinus albus HOM05D002090 ORTHO05D001923 1.3e-18 97.1 173 32.4
Medtr0003s0290 Medicago truncatula HOM05D002090 ORTHO05D001923 1.3e-18 97.1 155 29.7
Medtr6g464080 Medicago truncatula HOM05D002090 ORTHO05D001923 1.3e-18 97.1 174 33.9
Lalb_Chr11g0063921 Lupinus albus HOM05D002090 ORTHO05D001923 3.0e-18 95.9 172 32.0
Lalb_Chr15g0080831 Lupinus albus HOM05D002090 ORTHO05D001923 3.0e-18 95.9 172 32.0
Lalb_Chr24g0395611 Lupinus albus HOM05D002090 ORTHO05D001923 3.0e-18 95.9 172 32.0
Lalb_Chr25g0279801 Lupinus albus HOM05D002090 ORTHO05D001923 3.0e-18 95.9 172 32.0
Lalb_Chr25g0284421 Lupinus albus HOM05D002090 ORTHO05D001923 3.0e-18 95.9 172 32.0
Medtr4g070160 Medicago truncatula HOM05D002090 ORTHO05D001923 3.0e-18 95.9 156 32.1
Lalb_Chr07g0195661 Lupinus albus HOM05D002090 ORTHO05D001923 5.0e-18 95.1 172 32.0
Lalb_Chr13g0293801 Lupinus albus HOM05D002090 ORTHO05D001923 5.0e-18 95.1 170 32.4
Glyma.04G181700 Glycine max HOM05D002090 ORTHO05D001923 6.6e-18 94.7 154 34.4
Lalb_Chr01g0020731 Lupinus albus HOM05D002090 ORTHO05D001923 6.6e-18 94.7 172 31.4
Lalb_Chr03g0030491 Lupinus albus HOM05D002090 ORTHO05D001923 6.6e-18 94.7 172 32.0
Lalb_Chr10g0095211 Lupinus albus HOM05D002090 ORTHO05D001923 6.6e-18 94.7 172 31.4
Lalb_Chr14g0362191 Lupinus albus HOM05D002090 ORTHO05D001923 6.6e-18 94.7 170 33.5
Lalb_Chr14g0376091 Lupinus albus HOM05D002090 ORTHO05D001923 6.6e-18 94.7 172 31.4
Lalb_Chr20g0117751 Lupinus albus HOM05D002090 ORTHO05D001923 8.6e-18 94.4 172 31.4
Lalb_Chr12g0196331 Lupinus albus HOM05D002090 ORTHO05D001923 5.6e-17 91.7 172 30.8
Lalb_Chr16g0381501 Lupinus albus HOM05D002090 ORTHO05D001923 5.6e-17 91.7 172 30.8
Lalb_Chr23g0269621 Lupinus albus HOM05D002090 ORTHO05D001923 5.6e-17 91.7 172 30.8
Lalb_Chr15g0085801 Lupinus albus HOM05D002090 ORTHO05D001923 7.3e-17 91.3 164 29.9
VMungo0540G0980 Vigna mungo HOM05D002090 ORTHO05D001923 7.3e-17 91.3 169 32.0
Glyma.16G116866 Glycine max HOM05D002090 ORTHO05D001923 1.6e-16 90.1 164 32.3
Lalb_Chr24g0399451 Lupinus albus HOM05D002090 ORTHO05D001923 2.1e-16 89.7 164 29.3
Lalb_Chr25g0281591 Lupinus albus HOM05D002090 ORTHO05D001923 1.8e-15 86.7 175 29.1
Glyma.11G178600 Glycine max HOM05D002090 ORTHO05D001923 2.3e-15 86.3 160 33.1
Medtr1g011320 Medicago truncatula HOM05D002090 ORTHO05D001923 2.3e-15 86.3 164 34.8
Psat6g240360 Pisum sativum HOM05D002090 ORTHO05D001923 4.0e-15 85.5 170 31.8
Medtr1g043690 Medicago truncatula HOM05D002090 ORTHO05D001923 5.2e-15 85.1 172 30.2
Medtr6g055250 Medicago truncatula HOM05D002090 ORTHO05D001923 6.8e-15 84.7 178 27.5
TPR.G15265 Trifolium pratense HOM05D002090 ORTHO05D001923 6.8e-15 84.7 163 29.4
Medtr7g052740 Medicago truncatula HOM05D002090 ORTHO05D001923 8.9e-15 84.3 152 27.0
Psat5g061840 Pisum sativum HOM05D002090 ORTHO05D001923 8.9e-15 84.3 167 31.7
TPR.G26860 Trifolium pratense HOM05D002090 ORTHO05D001923 8.9e-15 84.3 164 29.3
Lalb_Chr09g0332511 Lupinus albus HOM05D002090 ORTHO05D001923 2.0e-14 83.2 156 28.8
Psat1g003680 Pisum sativum HOM05D002090 ORTHO05D001923 2.0e-14 83.2 164 27.4
Medtr8g076570 Medicago truncatula HOM05D002790 ORTHO05D003033 5.8e-14 81.6 158 32.3
Psat5g106080 Pisum sativum HOM05D002090 ORTHO05D001923 9.8e-14 80.9 82 48.8
Lalb_Chr13g0293751 Lupinus albus HOM05D002090 ORTHO05D001923 1.3e-13 80.5 121 33.9
Medtr2g060880 Medicago truncatula HOM05D002090 ORTHO05D001923 3.7e-13 79.0 164 30.5
Lalb_Chr25g0280991 Lupinus albus HOM05D002090 ORTHO05D001923 4.9e-13 78.6 146 28.8
Lalb_Chr10g0096101 Lupinus albus HOM05D002090 ORTHO05D001923 2.4e-12 76.3 145 29.7
Medtr2g055290 Medicago truncatula HOM05D002090 ORTHO05D001923 3.2e-12 75.9 163 29.4
Glyma.20G034801 Glycine max HOM05D002090 ORTHO05D001923 4.1e-12 75.5 114 39.5
Medtr8g077490 Medicago truncatula HOM05D002090 ORTHO05D001923 4.1e-12 75.5 106 38.7
TPR.G27142 Trifolium pratense HOM05D002090 ORTHO05D001923 4.1e-12 75.5 36 91.7
Lalb_Chr06g0171211 Lupinus albus HOM05D002090 ORTHO05D001923 5.4e-12 75.1 94 40.4
Glyma.18G301950 Glycine max HOM05D002090 ORTHO05D001923 1.2e-11 73.9 158 30.4
Glyma.05G084900 Glycine max HOM05D002090 ORTHO05D001923 1.6e-11 73.6 117 36.8
Lalb_Chr11g0068191 Lupinus albus HOM05D002090 ORTHO05D001923 1.6e-11 73.6 92 39.1
Medtr1g092990 Medicago truncatula HOM05D000096 ORTHO05D000045 6.0e-11 71.6 85 42.4
Glyma.05G078800 Glycine max HOM05D002090 ORTHO05D001923 7.8e-11 71.2 49 55.1
Glyma.02G161500 Glycine max HOM05D002090 ORTHO05D001923 1.3e-10 70.5 157 30.6
TPR.G26593 Trifolium pratense HOM05D002090 ORTHO05D001923 1.7e-10 70.1 84 39.3
Lj3g0021994 Lotus japonicus HOM05D002090 ORTHO05D001923 2.3e-10 69.7 78 42.3
Lalb_Chr05g0227341 Lupinus albus HOM05D002090 ORTHO05D001923 2.3e-10 69.7 146 28.1
Glyma.17G216450 Glycine max HOM05D002090 ORTHO05D001923 3.9e-10 68.9 49 53.1
Lalb_Chr25g0282801 Lupinus albus HOM05D002090 ORTHO05D001923 5.1e-10 68.6 94 35.1
Medtr7g450880 Medicago truncatula HOM05D002090 ORTHO05D001923 8.6e-10 67.8 108 30.6
Glyma.10G108100 Glycine max HOM05D002090 ORTHO05D001923 1.5e-09 67.0 92 40.2
Lalb_Chr02g0157151 Lupinus albus HOM05D002090 ORTHO05D001923 1.5e-09 67.0 94 36.2
Medtr5g041170 Medicago truncatula HOM05D002090 ORTHO05D001923 1.5e-09 67.0 103 32.0
Lalb_Chr11g0072891 Lupinus albus HOM05D002090 ORTHO05D001923 1.9e-09 66.6 92 37.0
Medtr1g092930 Medicago truncatula HOM05D000096 ORTHO05D000045 1.9e-09 66.6 85 40.0
Psat0s1847g0080 Pisum sativum HOM05D002090 ORTHO05D001923 3.3e-09 65.9 123 34.1
Medtr1g062890 Medicago truncatula HOM05D002090 ORTHO05D001923 4.3e-09 65.5 103 36.9
Medtr8g076180 Medicago truncatula HOM05D002090 ORTHO05D001923 4.3e-09 65.5 145 25.5
TPR.G10894 Trifolium pratense HOM05D002090 ORTHO05D001923 1.2e-08 63.9 50 54.0
Glyma.09G101732 Glycine max HOM05D002090 ORTHO05D001923 1.6e-08 63.5 95 38.9
Psat1g120640 Pisum sativum HOM05D002090 ORTHO05D015180 1.6e-08 63.5 157 27.4
Glyma.02G181950 Glycine max HOM05D002090 ORTHO05D001923 2.1e-08 63.2 78 43.6
TWI53G0107 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.1e-08 63.2 176 25.6
Lalb_Chr20g0115961 Lupinus albus HOM05D002090 ORTHO05D001923 2.8e-08 62.8 110 30.0
Psat5g155960 Pisum sativum HOM05D002090 ORTHO05D001923 2.8e-08 62.8 83 39.8
Lalb_Chr20g0117411 Lupinus albus HOM05D002090 ORTHO05D001923 4.7e-08 62.0 93 34.4
Glyma.19G045050 Glycine max HOM05D002090 ORTHO05D001923 6.2e-08 61.6 99 36.4
Lalb_Chr09g0332121 Lupinus albus HOM05D002090 ORTHO05D001923 6.2e-08 61.6 93 35.5
Glyma.10G114800 Glycine max HOM05D002090 ORTHO05D001923 8.1e-08 61.2 84 39.3
TPR.G8108 Trifolium pratense HOM05D000096 ORTHO05D000045 8.1e-08 61.2 50 50.0
Lalb_Chr07g0192401 Lupinus albus HOM05D002090 ORTHO05D001923 1.1e-07 60.8 87 35.6
Lalb_Chr11g0070891 Lupinus albus HOM05D002090 ORTHO05D001923 1.1e-07 60.8 93 35.5
Psat1g078880 Pisum sativum HOM05D002090 ORTHO05D001923 1.1e-07 60.8 86 36.0
Glyma.13G082501 Glycine max HOM05D002090 ORTHO05D001923 3.1e-07 59.3 49 49.0
HanXRQChr09g0260311 Helianthus annuus HOM05D000353 ORTHO05D000174 3.1e-07 59.3 167 24.6
Lalb_Chr11g0072791 Lupinus albus HOM05D002090 ORTHO05D001923 3.1e-07 59.3 131 29.0
TWI31G1318 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 3.1e-07 59.3 176 24.4
Psat5g054720 Pisum sativum HOM05D002090 ORTHO05D001923 4.0e-07 58.9 105 30.5
Lalb_Chr11g0072591 Lupinus albus HOM05D002090 ORTHO05D001923 5.2e-07 58.5 89 33.7
TPR.G39328 Trifolium pratense HOM05D002090 ORTHO05D001923 5.2e-07 58.5 45 51.1
Lalb_Chr08g0235451 Lupinus albus HOM05D002090 ORTHO05D001923 1.2e-06 57.4 92 33.7
Glyma.14G139850 Glycine max HOM05D002090 ORTHO05D001923 2.0e-06 56.6 92 33.7
Psat6g082280 Pisum sativum HOM05D002090 ORTHO05D001923 2.0e-06 56.6 50 38.0
Psat0s2406g0320 Pisum sativum HOM05D002090 ORTHO05D001923 2.6e-06 56.2 68 42.6
Medtr6g477970 Medicago truncatula HOM05D002090 ORTHO05D001923 3.4e-06 55.8 95 33.7
TPR.G24285 Trifolium pratense HOM05D052103 ORTHO05D026072 4.4e-06 55.5 28 85.7
Medtr2g055900 Medicago truncatula HOM05D002090 ORTHO05D001923 5.8e-06 55.1 101 34.7
Medtr6g477950 Medicago truncatula HOM05D002090 ORTHO05D001923 5.8e-06 55.1 96 34.4
Medtr5g064590 Medicago truncatula HOM05D002090 ORTHO05D001923 7.6e-06 54.7 70 32.9
Medtr8g469790 Medicago truncatula HOM05D000014 ORTHO05D000016 7.6e-06 54.7 77 37.7


User provided reference genes

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