Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8202 Trifolium pratense HOM05D005454 ORTHO05D006781 2.0e-59 232.3 117 100.0
Medtr8g447300 Medicago truncatula HOM05D005454 ORTHO05D006781 1.5e-54 216.1 117 91.5
Psat4g141200 Pisum sativum HOM05D005454 ORTHO05D006781 1.5e-54 216.1 117 90.6
Ca_26272_v3 Cicer arietinum L. HOM05D005454 ORTHO05D006781 1.0e-52 209.9 114 89.5
Lj3g0001328 Lotus japonicus HOM05D005454 ORTHO05D006781 1.3e-50 203.0 118 85.6
Glyma.01G216400 Glycine max HOM05D005454 ORTHO05D006781 1.1e-49 199.9 121 83.5
Glyma.11G026500 Glycine max HOM05D005454 ORTHO05D006781 2.4e-49 198.7 118 83.9
Phvul.002G154100 Phaseolus vulgaris HOM05D005454 ORTHO05D006781 5.3e-49 197.6 109 87.2
Lalb_Chr03g0031911 Lupinus albus HOM05D005454 ORTHO05D006781 2.0e-48 195.7 109 86.2
VMungo1215G2509 Vigna mungo HOM05D005454 ORTHO05D006781 4.5e-48 194.5 109 86.2
arahy.Tifrunner.gnm1.ann1.DLUG3E Arachis hypogaea HOM05D005454 ORTHO05D006781 1.7e-47 192.6 116 81.9
arahy.Tifrunner.gnm1.ann1.TLTS2V Arachis hypogaea HOM05D005454 ORTHO05D006781 3.8e-47 191.4 119 79.8
Gohir.A02G014000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 1.6e-45 186.0 114 76.3
COL.COLO4_19518 Corchorus olitorius HOM05D005454 ORTHO05D006781 2.1e-45 185.7 111 81.1
Dinv42456 Davidia involucrata HOM05D005454 ORTHO05D006781 2.1e-45 185.7 113 77.9
PGSC0003DMG400011901 Solanum tuberosum HOM05D005454 ORTHO05D006781 2.1e-45 185.7 116 76.7
Solyc09g098140.4 Solanum lycopersicum HOM05D005454 ORTHO05D006781 2.7e-45 185.3 116 76.7
Sopen09g036090 Solanum pennellii HOM05D005454 ORTHO05D006781 2.7e-45 185.3 116 76.7
Nitab4.5_0006630g0030 Nicotiana tabacum HOM05D005454 ORTHO05D006781 3.6e-45 184.9 116 76.7
Gorai.002G165600 Gossypium raimondii HOM05D005454 ORTHO05D006781 8.0e-45 183.7 114 75.4
CAN.G710.29 Capsicum annuum HOM05D005454 ORTHO05D006781 1.4e-44 183.0 116 75.0
ClCG02G018790 Citrullus lanatus HOM05D005454 ORTHO05D006781 1.8e-44 182.6 116 76.7
Thecc.02G245200 Theobroma cacao HOM05D005454 ORTHO05D006781 1.8e-44 182.6 107 81.3
Nitab4.5_0004200g0060 Nicotiana tabacum HOM05D005454 ORTHO05D006781 3.0e-44 181.8 116 75.9
TAR626G0894 Trochodendron aralioides HOM05D005454 ORTHO05D006781 3.0e-44 181.8 111 73.9
Gohir.D01G133900 Gossypium hirsutum HOM05D005454 ORTHO05D006781 4.0e-44 181.4 114 74.6
PGR102G3369 Punica granatum HOM05D005454 ORTHO05D006781 5.2e-44 181.0 112 73.2
QL04p094645 Quercus lobata HOM05D005454 ORTHO05D006781 5.2e-44 181.0 114 76.3
QL04p094846 Quercus lobata HOM05D005454 ORTHO05D006781 5.2e-44 181.0 114 76.3
TWI59G0830 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 8.8e-44 180.3 116 74.1
Oeu029453.1 Olea europaea HOM05D005454 ORTHO05D006781 1.2e-43 179.9 111 76.6
Cc00_g09040 Coffea canephora HOM05D005454 ORTHO05D006781 1.5e-43 179.5 111 74.8
Ah.02g115510 Amaranthus hybridus HOM05D005454 ORTHO05D006781 2.0e-43 179.1 114 71.1
Duzib251G0225 Durio zibethinus HOM05D005454 ORTHO05D006781 2.0e-43 179.1 106 80.2
Sed0024280 Sechium edule HOM05D005454 ORTHO05D006781 2.0e-43 179.1 109 76.1
Duzib248G0167 Durio zibethinus HOM05D005454 ORTHO05D006781 3.4e-43 178.3 107 79.4
CANSAT56G0738 Cannabis sativa HOM05D005454 ORTHO05D006781 4.4e-43 177.9 106 74.5
CANSAT56G1199 Cannabis sativa HOM05D005454 ORTHO05D006781 4.4e-43 177.9 106 74.5
Nn7g38402 Nelumbo nucifera HOM05D005454 ORTHO05D006781 4.4e-43 177.9 111 74.8
Peaxi162Scf00286g00452 Petunia axillaris HOM05D005454 ORTHO05D006781 4.4e-43 177.9 116 74.1
Eucgr.F04477 Eucalyptus grandis HOM05D005454 ORTHO05D006781 5.7e-43 177.6 107 75.7
vmacro09764 Vaccinium macrocarpon HOM05D005454 ORTHO05D006781 5.7e-43 177.6 113 73.5
MBI13_g09219_MAGBIO Magnolia biondii HOM05D005454 ORTHO05D006781 7.5e-43 177.2 116 75.0
Prupe.4G126700 Prunus persica HOM05D005454 ORTHO05D006781 7.5e-43 177.2 116 73.3
GSVIVG01036708001 Vitis vinifera HOM05D005454 ORTHO05D006781 7.5e-43 177.2 115 74.8
Atru.chr1.44 Acer truncatum HOM05D005454 ORTHO05D006781 9.8e-43 176.8 112 72.3
Ciclev10006210m.g Citrus clementina HOM05D005454 ORTHO05D006781 9.8e-43 176.8 107 76.6
Potri.008G081400 Populus trichocarpa HOM05D005454 ORTHO05D006781 9.8e-43 176.8 107 75.7
CsaV3_6G013400 Cucumis sativus L. HOM05D005454 ORTHO05D006781 1.3e-42 176.4 108 75.9
Hund10936 Selenicereus undatus HOM05D005454 ORTHO05D006781 1.3e-42 176.4 111 72.1
Actinidia00854 Actinidia chinensis HOM05D005454 ORTHO05D006781 2.2e-42 175.6 111 72.1
TWI38G1327 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 2.8e-42 175.3 116 73.3
ATR0820G041 Amborella trichopoda HOM05D005454 ORTHO05D006781 6.3e-42 174.1 113 69.9
MD10G1217600 Malus domestica HOM05D005454 ORTHO05D006781 6.3e-42 174.1 116 72.4
CiPaw.15G112200 Carya illinoinensis HOM05D005454 ORTHO05D006781 8.3e-42 173.7 116 71.6
Migut.M01498 Erythranthe guttata HOM05D005454 ORTHO05D006781 8.3e-42 173.7 111 72.1
Manes.16G045300 Manihot esculenta HOM05D005454 ORTHO05D006781 8.3e-42 173.7 107 74.8
Cpa.g.sc32.137 Carica papaya HOM05D005454 ORTHO05D006781 1.4e-41 172.9 115 70.4
unitig_32.g11075 Utricularia gibba HOM05D005454 ORTHO05D006781 1.4e-41 172.9 112 70.5
Zm00001eb241290 Zea mays HOM05D005454 ORTHO05D006781 1.4e-41 172.9 110 74.5
Os02g0495900 Oryza sativa ssp. japonica HOM05D005454 ORTHO05D006781 1.8e-41 172.6 111 72.1
RcHm_v2.0_Chr5g0023201 Rosa chinensis HOM05D005454 ORTHO05D006781 1.8e-41 172.6 111 69.4
Sabra08G0060600 Salix brachista HOM05D005454 ORTHO05D006781 1.8e-41 172.6 107 73.8
MD05G1239400 Malus domestica HOM05D005454 ORTHO05D006781 2.4e-41 172.2 113 71.7
FvH4_3g13970 Fragaria vesca HOM05D005454 ORTHO05D006781 3.1e-41 171.8 111 69.4
FAN11G3450 Fragaria x ananassa HOM05D005454 ORTHO05D006781 3.1e-41 171.8 111 69.4
HanXRQChr13g0408901 Helianthus annuus HOM05D005454 ORTHO05D006781 3.1e-41 171.8 112 70.5
HanXRQChr13g0408931 Helianthus annuus HOM05D005454 ORTHO05D006781 3.1e-41 171.8 112 70.5
Sc18g0003140 Simmondsia chinensis HOM05D005454 ORTHO05D006781 3.1e-41 171.8 105 74.3
Lsat_1_v5_gn_5_184081 Lactuca sativa HOM05D005454 ORTHO05D006781 4.1e-41 171.4 104 76.0
Aqoxy1G01376 Aquilegia oxysepala HOM05D005454 ORTHO05D006781 5.4e-41 171.0 116 71.6
EL10Ac5g12502 Beta vulgaris HOM05D005454 ORTHO05D006781 7.0e-41 170.6 112 69.6
FAN16G0850 Fragaria x ananassa HOM05D005454 ORTHO05D006781 7.0e-41 170.6 111 68.5
FAN21G1174 Fragaria x ananassa HOM05D005454 ORTHO05D006781 7.0e-41 170.6 111 68.5
PSO675G7587 Papaver somniferum HOM05D005454 ORTHO05D006781 1.2e-40 169.9 115 68.7
BolC6t38153H Brassica oleracea HOM05D005454 ORTHO05D006781 1.6e-40 169.5 108 68.5
BcaC08g45360 Brassica carinata HOM05D005454 ORTHO05D006781 2.0e-40 169.1 107 69.2
A07p27170 Brassica napus HOM05D005454 ORTHO05D006781 2.0e-40 169.1 107 69.2
C06p29920 Brassica napus HOM05D005454 ORTHO05D006781 2.0e-40 169.1 107 69.2
BraA07t30361Z Brassica rapa HOM05D005454 ORTHO05D006781 2.0e-40 169.1 107 69.2
SGA_v2.0_scaffold186G40175 Striga asiatica HOM05D005454 ORTHO05D006781 2.0e-40 169.1 111 70.3
BcaC08g47498 Brassica carinata HOM05D005454 ORTHO05D006781 2.7e-40 168.7 106 69.8
C06p53270 Brassica napus HOM05D005454 ORTHO05D006781 2.7e-40 168.7 106 69.8
BolC6t40345H Brassica oleracea HOM05D005454 ORTHO05D006781 2.7e-40 168.7 106 69.8
BraA07t31955Z Brassica rapa HOM05D005454 ORTHO05D006781 2.7e-40 168.7 106 69.8
Rhsim04G0003500 Rhododendron simsii HOM05D005454 ORTHO05D006781 2.7e-40 168.7 127 66.1
Thhalv10019255m.g Eutrema salsugineum HOM05D005454 ORTHO05D006781 3.5e-40 168.3 107 69.2
SalBow8G4406 Salvia bowleyana HOM05D005454 ORTHO05D006781 3.5e-40 168.3 111 69.4
SalBow8G5040 Salvia bowleyana HOM05D005454 ORTHO05D006781 3.5e-40 168.3 111 69.4
AUR62030518 Chenopodium quinoa HOM05D005454 ORTHO05D006781 4.5e-40 167.9 112 69.6
AUR62030774 Chenopodium quinoa HOM05D005454 ORTHO05D006781 4.5e-40 167.9 112 69.6
MSTRG.16083 Avicennia marina HOM05D005454 ORTHO05D006781 1.3e-39 166.4 111 70.3
BcaB02g07212 Brassica carinata HOM05D005454 ORTHO05D006781 1.3e-39 166.4 106 68.9
Aa31LG4G1640 Aethionema arabicum HOM05D005454 ORTHO05D006781 2.9e-39 165.2 114 64.9
ECA240G0828 Erigeron canadensis HOM05D005454 ORTHO05D006781 2.9e-39 165.2 115 67.8
THA.LOC104808143 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 2.9e-39 165.2 106 70.8
Carub.0002s2625 Capsella rubella HOM05D005454 ORTHO05D006781 3.8e-39 164.9 106 68.9
FAN25G3791 Fragaria x ananassa HOM05D005454 ORTHO05D006781 5.0e-39 164.5 111 66.7
AL2G40000 Arabidopsis lyrata HOM05D005454 ORTHO05D006781 1.5e-38 162.9 106 67.9
THA.LOC104812391 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 1.9e-38 162.5 113 67.3
AT1G79390 Arabidopsis thaliana HOM05D005454 ORTHO05D006781 2.5e-38 162.2 106 67.9
CiPaw.15G112600 Carya illinoinensis HOM05D005454 ORTHO05D006781 4.2e-38 161.4 138 60.1
Sabra10G0134500 Salix brachista HOM05D005454 ORTHO05D006781 2.8e-37 158.7 112 67.9
SEGI_00588 Sequoiadendron giganteum HOM05D005454 ORTHO05D006781 4.7e-37 157.9 107 67.3
MELO3C019617.2 Cucumis melo HOM05D005454 ORTHO05D006781 6.1e-37 157.5 136 60.3
CiPaw.15G112400 Carya illinoinensis HOM05D005454 ORTHO05D006781 3.0e-36 155.2 130 60.0
CDE02G1314 Ceratophyllum demersum HOM05D000236 ORTHO05D000192 6.8e-28 127.5 83 75.9
Pp3c27_5100 Physcomitrium patens HOM05D005454 ORTHO05D006781 1.1e-22 110.2 102 52.0
Sp5g34440 Schrenkiella parvula HOM05D005454 ORTHO05D006781 3.3e-22 108.6 73 69.9
AagrBONN_evm.TU.Sc2ySwM_117.1988 Anthoceros agrestis HOM05D005454 ORTHO05D006781 3.6e-21 105.1 102 49.0
Mapoly0011s0156 Marchantia polymorpha HOM05D005454 ORTHO05D006781 1.8e-20 102.8 102 49.0
Haze_01788 Corylus avellana HOM05D005454 ORTHO05D006781 2.6e-19 99.0 63 66.7
HPP92_015989 Vanilla planifolia HOM05D005454 ORTHO05D006781 3.4e-19 98.6 63 71.4
Cfa017755 Carpinus fangiana HOM05D005454 ORTHO05D006781 7.5e-19 97.4 59 71.2
Haze_08480 Corylus avellana HOM05D005454 ORTHO05D006781 9.8e-19 97.1 59 69.5
Haze_18487 Corylus avellana HOM05D005454 ORTHO05D006781 9.8e-19 97.1 58 72.4
Gohir.A03G171875 Gossypium hirsutum HOM05D005454 ORTHO05D006781 9.8e-19 97.1 63 69.8
Cfa017757 Carpinus fangiana HOM05D005454 ORTHO05D006781 3.2e-17 92.0 58 82.8
CSS0036802 Camellia sinensis var. sinensis HOM05D005454 ORTHO05D006781 4.1e-17 91.7 57 68.4
Hma1.2p1_0151F.1_g066990 Hydrangea macrophylla HOM05D005454 ORTHO05D006781 5.4e-17 91.3 58 67.2
CDE04G2596 Ceratophyllum demersum HOM05D005454 ORTHO05D006781 1.2e-16 90.1 69 65.2
QL04p094659 Quercus lobata HOM05D005454 ORTHO05D006781 1.2e-16 90.1 56 80.4
Potri.010G174700 Populus trichocarpa HOM05D005454 ORTHO05D006781 4.6e-16 88.2 59 78.0
A07p44460 Brassica napus HOM05D005454 ORTHO05D006781 6.0e-16 87.8 58 58.6
Atru.chr1.31 Acer truncatum HOM05D005454 ORTHO05D006781 7.8e-16 87.4 75 62.7
Actinidia03633 Actinidia chinensis HOM05D005454 ORTHO05D012925 1.0e-15 87.0 54 74.1
Nn7g38396 Nelumbo nucifera HOM05D005454 ORTHO05D006781 1.0e-15 87.0 67 56.7
CARHR073040 Cardamine hirsuta HOM05D005454 ORTHO05D006781 2.3e-15 85.9 59 59.3
CARHR073050 Cardamine hirsuta HOM05D005454 ORTHO05D006781 2.3e-15 85.9 49 81.6
CBR_g2846 Chara braunii HOM05D005454 ORTHO05D006781 5.1e-15 84.7 104 41.3
Cc00_g28770 Coffea canephora HOM05D001769 ORTHO05D001695 5.1e-15 84.7 60 66.7
BolC8t48807H Brassica oleracea HOM05D005454 ORTHO05D006781 2.5e-14 82.4 49 77.6
SMO367G0923 Selaginella moellendorffii HOM05D005454 ORTHO05D006781 2.8e-13 79.0 101 40.6
Gohir.A04G138000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 3.1e-12 75.5 57 66.7
DCAR_013713 Daucus carota HOM05D005454 ORTHO05D006781 6.8e-12 74.3 102 41.2
BcaC08g42854 Brassica carinata HOM05D005454 ORTHO05D006781 5.8e-11 71.2 43 76.7
C06p00690 Brassica napus HOM05D005454 ORTHO05D006781 5.8e-11 71.2 43 76.7
BolC6t35206H Brassica oleracea HOM05D005454 ORTHO05D006781 5.8e-11 71.2 43 76.7
C03p71170 Brassica napus HOM05D005454 ORTHO05D006781 7.5e-11 70.9 43 76.7
RcHm_v2.0_Chr5g0023191 Rosa chinensis HOM05D005454 ORTHO05D006781 4.1e-09 65.1 55 45.5


User provided reference genes

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