Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8135 Trifolium pratense HOM05D008730 ORTHO05D010922 5.7e-99 364.4 202 100.0
TPR.G32773 Trifolium pratense HOM05D008730 ORTHO05D010922 1.9e-86 322.8 203 92.1
Medtr7g067500 Medicago truncatula HOM05D008730 ORTHO05D010922 3.6e-77 292.0 204 84.3
Psat3g130400 Pisum sativum HOM05D008730 ORTHO05D010922 9.2e-73 277.3 203 73.9
Glyma.18G198600 Glycine max HOM05D008730 ORTHO05D010922 3.9e-63 245.4 201 73.1
Phvul.008G105800 Phaseolus vulgaris HOM05D008730 ORTHO05D010922 4.3e-62 241.9 201 64.7
VMungo1383G2265 Vigna mungo HOM05D008730 ORTHO05D010922 3.6e-61 238.8 201 64.2
Lj1g0001006 Lotus japonicus HOM05D008730 ORTHO05D010922 4.7e-61 238.4 203 71.4
Glyma.07G147500 Glycine max HOM05D008730 ORTHO05D010922 3.7e-58 228.8 203 65.5
Prupe.6G274600 Prunus persica HOM05D008730 ORTHO05D010922 1.5e-38 163.7 202 56.9
Hma1.2p1_0362F.1_g136070 Hydrangea macrophylla HOM05D008730 ORTHO05D010922 3.3e-38 162.5 209 52.2
Thecc.05G019000 Theobroma cacao HOM05D008730 ORTHO05D010922 3.3e-38 162.5 194 54.6
CiPaw.10G155800 Carya illinoinensis HOM05D008730 ORTHO05D010922 1.5e-35 153.7 199 56.8
FAN09G0720 Fragaria x ananassa HOM05D008730 ORTHO05D010922 9.9e-35 151.0 188 52.7
MD12G1164100 Malus domestica HOM05D008730 ORTHO05D010922 2.2e-34 149.8 201 55.7
RcHm_v2.0_Chr3g0463501 Rosa chinensis HOM05D008730 ORTHO05D010922 2.9e-34 149.4 187 55.1
Ciclev10013688m.g Citrus clementina HOM05D008730 ORTHO05D010922 1.9e-33 146.7 205 53.2
Haze_20977 Corylus avellana HOM05D008730 ORTHO05D010922 1.9e-33 146.7 192 53.6
FvH4_6g11721 Fragaria vesca HOM05D008730 ORTHO05D010922 3.2e-33 146.0 182 56.0
FAN05G3712 Fragaria x ananassa HOM05D008730 ORTHO05D010922 7.1e-33 144.8 183 55.2
ClCG04G007080 Citrullus lanatus HOM05D008730 ORTHO05D010922 2.7e-32 142.9 203 49.8
Sed0022931 Sechium edule HOM05D008730 ORTHO05D010922 3.5e-32 142.5 195 47.7
Atru.chr8.2218 Acer truncatum HOM05D008730 ORTHO05D010922 6.0e-32 141.7 210 54.3
Aqoxy2G00930 Aquilegia oxysepala HOM05D008730 ORTHO05D010922 2.3e-31 139.8 206 49.5
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 3.0e-31 139.4 142 52.8
Cfa017229 Carpinus fangiana HOM05D008730 ORTHO05D010922 5.1e-31 138.7 201 53.2
FAN14G1945 Fragaria x ananassa HOM05D008730 ORTHO05D010922 5.1e-31 138.7 142 52.8
Gohir.D09G159900 Gossypium hirsutum HOM05D008730 ORTHO05D010922 1.5e-30 137.1 200 52.0
Gorai.006G181500 Gossypium raimondii HOM05D008730 ORTHO05D010922 1.5e-30 137.1 200 52.0
Gohir.A09G164300 Gossypium hirsutum HOM05D008730 ORTHO05D010922 3.3e-30 136.0 202 52.0
Manes.08G090500 Manihot esculenta HOM05D008730 ORTHO05D010922 2.1e-29 133.3 202 46.5
MELO3C003244.2 Cucumis melo HOM05D008730 ORTHO05D010922 6.2e-29 131.7 198 46.0
Potri.006G098800 Populus trichocarpa HOM05D008730 ORTHO05D010922 1.1e-28 131.0 158 50.0
DCAR_018712 Daucus carota HOM05D008730 ORTHO05D010922 2.4e-28 129.8 200 47.5
CsaV3_4G026170 Cucumis sativus L. HOM05D008730 ORTHO05D010922 1.2e-24 117.5 198 44.4
Potri.016G114100 Populus trichocarpa HOM05D008730 ORTHO05D010922 6.7e-23 111.7 131 51.1
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 1.3e-21 107.5 129 58.1
Lsat_1_v5_gn_9_33720 Lactuca sativa HOM05D008730 ORTHO05D010922 8.1e-21 104.8 208 44.7
Migut.J00187 Erythranthe guttata HOM05D008730 ORTHO05D010922 2.6e-19 99.8 156 40.4
ATR0618G247 Amborella trichopoda HOM05D008730 ORTHO05D010922 3.8e-18 95.9 203 41.9
Cpa.g.sc163.12 Carica papaya HOM05D008730 ORTHO05D010922 2.3e-15 86.7 172 38.4
MD04G1149700 Malus domestica HOM05D008730 ORTHO05D010922 2.8e-13 79.7 104 56.7
Cfa017227 Carpinus fangiana HOM05D008730 ORTHO05D010922 4.2e-09 65.9 95 40.0


User provided reference genes

Program Settings