Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8107 Trifolium pratense HOM05D005087 ORTHO05D411155 1.7e-35 152.1 77 100.0
Medtr4g115050 Medicago truncatula HOM05D005087 ORTHO05D006427 5.9e-20 100.5 101 56.4
Ca_14518_v3 Cicer arietinum L. HOM05D005087 ORTHO05D006427 3.8e-19 97.8 72 68.1
Psat6g018320 Pisum sativum HOM05D005087 ORTHO05D006427 2.5e-18 95.1 101 55.4
Lj3g0015731 Lotus japonicus HOM05D005087 ORTHO05D006427 3.6e-17 91.3 100 51.0
Phvul.002G285500 Phaseolus vulgaris HOM05D005087 ORTHO05D006427 1.3e-16 89.4 101 48.5
Medtr3g033470 Medicago truncatula HOM05D005087 ORTHO05D006427 1.8e-16 89.0 58 74.1
TPR.G14572 Trifolium pratense HOM05D005087 ORTHO05D006427 1.8e-16 89.0 59 71.2
VMungo0251G2588 Vigna mungo HOM05D005087 ORTHO05D006427 1.9e-15 85.5 101 46.5
Medtr5g036370 Medicago truncatula HOM05D005087 ORTHO05D006427 5.7e-15 84.0 59 67.8
Glyma.20G198300 Glycine max HOM05D005087 ORTHO05D006427 1.3e-14 82.8 101 46.5
Lj3g0013327 Lotus japonicus HOM05D005087 ORTHO05D006427 3.1e-13 78.2 71 50.7
CiPaw.14G002700 Carya illinoinensis HOM05D005087 ORTHO05D006427 7.2e-10 67.0 75 45.3
Lalb_Chr04g0263871 Lupinus albus HOM05D005087 ORTHO05D006427 9.4e-10 66.6 101 38.6
ClCG09G004390 Citrullus lanatus HOM05D005087 ORTHO05D006427 2.7e-09 65.1 75 46.7
Prupe.2G022000 Prunus persica HOM05D005087 ORTHO05D006427 3.6e-09 64.7 72 47.2
CsaV3_7G030750 Cucumis sativus L. HOM05D005087 ORTHO05D006427 4.6e-09 64.3 75 45.3
QL04p009808 Quercus lobata HOM05D005087 ORTHO05D006427 4.6e-09 64.3 75 42.7
Haze_03133 Corylus avellana HOM05D005087 ORTHO05D006427 6.1e-09 63.9 75 44.0
Haze_03136 Corylus avellana HOM05D005087 ORTHO05D006427 6.1e-09 63.9 75 44.0
Sed0026614 Sechium edule HOM05D005087 ORTHO05D006427 6.1e-09 63.9 71 49.3
Actinidia21541 Actinidia chinensis HOM05D005087 ORTHO05D006427 3.9e-08 61.2 75 45.3
arahy.Tifrunner.gnm1.ann1.JJ1LEU Arachis hypogaea HOM05D005087 ORTHO05D006427 3.9e-08 61.2 75 44.0
vmacro21195 Vaccinium macrocarpon HOM05D005087 ORTHO05D006427 3.9e-08 61.2 76 43.4
arahy.Tifrunner.gnm1.ann1.1A5L99 Arachis hypogaea HOM05D005087 ORTHO05D006427 6.7e-08 60.5 75 42.7
CSS0029256 Camellia sinensis var. sinensis HOM05D005087 ORTHO05D006427 6.7e-08 60.5 72 44.4
Cpa.g.sc125.40 Carica papaya HOM05D005087 ORTHO05D006427 6.7e-08 60.5 71 42.3
Rhsim01G0127000 Rhododendron simsii HOM05D005087 ORTHO05D006427 6.7e-08 60.5 76 42.1
Aqoxy1G00327 Aquilegia oxysepala HOM05D005087 ORTHO05D006427 1.1e-07 59.7 72 41.7
TAR623G1255 Trochodendron aralioides HOM05D005087 ORTHO05D006427 2.0e-07 58.9 72 41.7
MD07G1021900 Malus domestica HOM05D005087 ORTHO05D006427 3.3e-07 58.2 76 38.2
EL10Ac2g04365 Beta vulgaris HOM05D005087 ORTHO05D006427 5.7e-07 57.4 72 38.9
MELO3C023581.2 Cucumis melo HOM05D005087 ORTHO05D006427 5.7e-07 57.4 75 41.3
Manes.10G136400 Manihot esculenta HOM05D005087 ORTHO05D006427 5.7e-07 57.4 72 43.1
SGA_v2.0_scaffold119G32758 Striga asiatica HOM05D005087 ORTHO05D006427 7.4e-07 57.0 71 39.4
Thecc.05G218700 Theobroma cacao HOM05D005087 ORTHO05D006427 7.4e-07 57.0 70 42.9
GSVIVG01032195001 Vitis vinifera HOM05D005087 ORTHO05D006427 7.4e-07 57.0 100 36.0
Duzib177G0717 Durio zibethinus HOM05D005087 ORTHO05D006427 9.7e-07 56.6 76 42.1
Dinv09311 Davidia involucrata HOM05D005087 ORTHO05D006427 1.3e-06 56.2 52 51.9
RcHm_v2.0_Chr1g0317911 Rosa chinensis HOM05D005087 ORTHO05D006427 1.3e-06 56.2 52 48.1
CDE09G1121 Ceratophyllum demersum HOM05D005087 ORTHO05D006427 3.7e-06 54.7 72 37.5
TWI09G0473 Tripterygium wilfordii HOM05D005087 ORTHO05D006427 3.7e-06 54.7 72 41.7
Aa31LG11G13680 Aethionema arabicum HOM05D005087 ORTHO05D006427 4.8e-06 54.3 70 41.4
SGA_v2.0_scaffold42G16189 Striga asiatica HOM05D005087 ORTHO05D006427 4.8e-06 54.3 71 38.0
Lj9C640G8 Lonicera japonica HOM05D005087 ORTHO05D006427 6.3e-06 53.9 76 36.8
SalBow5G0870 Salvia bowleyana HOM05D005087 ORTHO05D006427 8.2e-06 53.5 71 36.6
SalBow5G2001 Salvia bowleyana HOM05D005087 ORTHO05D006427 8.2e-06 53.5 71 36.6


User provided reference genes

Program Settings