Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8094 Trifolium pratense HOM05D007450 ORTHO05D009377 4.7e-58 227.6 113 100.0
Medtr5g029660 Medicago truncatula HOM05D007450 ORTHO05D009377 8.0e-50 200.3 114 90.4
Psat2g138000 Pisum sativum HOM05D007450 ORTHO05D009377 1.3e-47 193.0 114 87.7
Ca_08150_v3 Cicer arietinum L. HOM05D007450 ORTHO05D009377 1.2e-40 169.9 114 81.6
Lj2g0017142 Lotus japonicus HOM05D007450 ORTHO05D009377 3.2e-35 151.8 115 75.7
Glyma.09G206700 Glycine max HOM05D007450 ORTHO05D009377 2.2e-31 139.0 116 69.8
Glyma.01G015700 Glycine max HOM05D007450 ORTHO05D009377 4.9e-31 137.9 116 69.8
CiPaw.11G096800 Carya illinoinensis HOM05D007450 ORTHO05D009377 7.0e-30 134.0 114 68.4
Cfa012487 Carpinus fangiana HOM05D007450 ORTHO05D009377 1.7e-28 129.4 114 67.5
FAN08G0787 Fragaria x ananassa HOM05D007450 ORTHO05D009377 1.7e-28 129.4 117 66.7
Phvul.002G138300 Phaseolus vulgaris HOM05D007450 ORTHO05D009377 3.8e-28 128.3 116 67.2
Manes.14G162800 Manihot esculenta HOM05D007450 ORTHO05D009377 1.1e-27 126.7 110 65.5
FvH4_5g22750 Fragaria vesca HOM05D007450 ORTHO05D009377 2.5e-27 125.6 117 65.0
FAN18G1197 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.5e-27 125.6 117 65.0
FAN18G1518 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.5e-27 125.6 117 65.0
Gohir.A12G207000 Gossypium hirsutum HOM05D007450 ORTHO05D009377 3.3e-27 125.2 113 63.7
FAN04G2147 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.1e-26 122.5 117 64.1
Lalb_Chr05g0215841 Lupinus albus HOM05D007450 ORTHO05D009377 2.1e-26 122.5 89 71.9
Potri.001G138700 Populus trichocarpa HOM05D007450 ORTHO05D009377 4.7e-26 121.3 113 62.8
FAN13G0277 Fragaria x ananassa HOM05D007450 ORTHO05D009377 6.1e-26 120.9 117 63.2
FAN13G1033 Fragaria x ananassa HOM05D007450 ORTHO05D009377 6.1e-26 120.9 117 63.2
RcHm_v2.0_Chr7g0211351 Rosa chinensis HOM05D007450 ORTHO05D009377 8.0e-26 120.6 117 63.2
TAR629G3037 Trochodendron aralioides HOM05D007450 ORTHO05D009377 2.3e-25 119.0 118 58.5
Prupe.5G030900 Prunus persica HOM05D007450 ORTHO05D009377 5.2e-25 117.9 116 62.1
Duzib205G1651 Durio zibethinus HOM05D007450 ORTHO05D009377 6.8e-25 117.5 113 60.2
PGR031G1038 Punica granatum HOM05D007450 ORTHO05D009377 2.6e-24 115.5 112 58.9
Dinv25243 Davidia involucrata HOM05D007450 ORTHO05D009377 7.5e-24 114.0 111 60.4
GSVIVG01013568001 Vitis vinifera HOM05D007450 ORTHO05D009377 7.5e-24 114.0 93 68.8
Sabra01G0107700 Salix brachista HOM05D007450 ORTHO05D009377 1.3e-23 113.2 92 68.5
Thecc.03G307400 Theobroma cacao HOM05D007450 ORTHO05D009377 3.7e-23 111.7 90 70.0
CSS0005314 Camellia sinensis var. sinensis HOM05D007450 ORTHO05D009377 1.1e-22 110.2 111 58.6
Gohir.D12G209400 Gossypium hirsutum HOM05D007450 ORTHO05D009377 1.1e-22 110.2 113 59.3
Actinidia14787 Actinidia chinensis HOM05D007450 ORTHO05D009377 1.4e-22 109.8 111 58.6
QL12p004405 Quercus lobata HOM05D007450 ORTHO05D009377 1.4e-22 109.8 97 68.0
Solyc08g076580.3 Solanum lycopersicum HOM05D007450 ORTHO05D009377 7.0e-22 107.5 102 61.8
CANSAT21G1074 Cannabis sativa HOM05D007450 ORTHO05D009377 9.2e-22 107.1 113 58.4
THA.LOC104808475 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 9.2e-22 107.1 105 61.0
Dinv28985 Davidia involucrata HOM05D007450 ORTHO05D009377 1.2e-21 106.7 92 65.2
Rhsim07G0130700 Rhododendron simsii HOM05D007450 ORTHO05D009377 1.2e-21 106.7 111 57.7
THA.LOC104798592 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 1.2e-21 106.7 105 60.0
Peaxi162Scf00879g00221 Petunia axillaris HOM05D007450 ORTHO05D009377 2.7e-21 105.5 103 59.2
Peaxi162Scf00170g01010 Petunia axillaris HOM05D007450 ORTHO05D009377 3.5e-21 105.1 109 56.9
VMungo1215G2816 Vigna mungo HOM05D007450 ORTHO05D009377 1.0e-20 103.6 93 69.9
Sopen08g025140 Solanum pennellii HOM05D007450 ORTHO05D009377 1.3e-20 103.2 98 61.2
Actinidia09178 Actinidia chinensis HOM05D007450 ORTHO05D009377 1.7e-20 102.8 102 58.8
arahy.Tifrunner.gnm1.ann1.UE78BX Arachis hypogaea HOM05D007450 ORTHO05D009377 1.7e-20 102.8 93 65.6
arahy.Tifrunner.gnm1.ann1.XXZI65 Arachis hypogaea HOM05D007450 ORTHO05D009377 1.7e-20 102.8 93 65.6
MD06G1038000 Malus domestica HOM05D007450 ORTHO05D009377 1.7e-20 102.8 116 53.4
Nitab4.5_0000353g0070 Nicotiana tabacum HOM05D007450 ORTHO05D009377 1.7e-20 102.8 102 59.8
CAN.G298.58 Capsicum annuum HOM05D007450 ORTHO05D009377 2.3e-20 102.4 102 59.8
Peaxi162Scf00170g00915 Petunia axillaris HOM05D007450 ORTHO05D009377 5.0e-20 101.3 111 54.1
Sed0022287 Sechium edule HOM05D007450 ORTHO05D009377 5.0e-20 101.3 106 61.3
Atru.chr6.1639 Acer truncatum HOM05D007450 ORTHO05D009377 8.6e-20 100.5 116 53.4
Ciclev10018330m.g Citrus clementina HOM05D007450 ORTHO05D009377 8.6e-20 100.5 89 62.9
PGSC0003DMG400014800 Solanum tuberosum HOM05D007450 ORTHO05D009377 8.6e-20 100.5 90 64.4
Thhalv10009436m.g Eutrema salsugineum HOM05D007450 ORTHO05D009377 1.5e-19 99.8 92 60.9
Nitab4.5_0000685g0040 Nicotiana tabacum HOM05D007450 ORTHO05D009377 1.5e-19 99.8 90 63.3
C05p38880 Brassica napus HOM05D007450 ORTHO05D009377 1.9e-19 99.4 101 58.4
BolC5t32629H Brassica oleracea HOM05D007450 ORTHO05D009377 1.9e-19 99.4 101 58.4
Carub.0001s3064 Capsella rubella HOM05D007450 ORTHO05D009377 1.9e-19 99.4 92 63.0
Sp1g27980 Schrenkiella parvula HOM05D007450 ORTHO05D009377 1.9e-19 99.4 92 63.0
AT1G32310 Arabidopsis thaliana HOM05D007450 ORTHO05D009377 2.5e-19 99.0 92 63.0
Cc08_g03220 Coffea canephora HOM05D007450 ORTHO05D009377 2.5e-19 99.0 93 65.6
Haze_08178 Corylus avellana HOM05D007450 ORTHO05D009377 2.5e-19 99.0 173 44.5
Gorai.008G225000 Gossypium raimondii HOM05D007450 ORTHO05D009377 3.3e-19 98.6 90 64.4
CARHR031660 Cardamine hirsuta HOM05D007450 ORTHO05D009377 5.6e-19 97.8 92 62.0
ECA233G1068 Erigeron canadensis HOM05D007450 ORTHO05D009377 7.3e-19 97.4 91 60.4
MELO3C003430.2 Cucumis melo HOM05D007450 ORTHO05D009377 1.2e-18 96.7 101 57.4
DCAR_008242 Daucus carota HOM05D007450 ORTHO05D009377 1.2e-18 96.7 90 63.3
Lalb_Chr16g0381181 Lupinus albus HOM05D007450 ORTHO05D009377 1.2e-18 96.7 91 61.5
BcaC05g27880 Brassica carinata HOM05D007450 ORTHO05D009377 1.6e-18 96.3 92 60.9
PSO063G4138 Papaver somniferum HOM05D007450 ORTHO05D009377 1.6e-18 96.3 118 49.2
PSO782G2764 Papaver somniferum HOM05D007450 ORTHO05D009377 2.1e-18 95.9 118 48.3
Sed0003049 Sechium edule HOM05D007450 ORTHO05D009377 2.8e-18 95.5 106 57.5
Eucgr.E00251 Eucalyptus grandis HOM05D007450 ORTHO05D009377 3.6e-18 95.1 112 52.7
A05p25040 Brassica napus HOM05D007450 ORTHO05D009377 4.7e-18 94.7 92 59.8
ClCG09G011730 Citrullus lanatus HOM05D007450 ORTHO05D009377 6.2e-18 94.4 93 62.4
BraA05t21386Z Brassica rapa HOM05D007450 ORTHO05D009377 1.1e-17 93.6 101 55.4
Aa31LG2G13720 Aethionema arabicum HOM05D007450 ORTHO05D009377 1.4e-17 93.2 92 58.7
Lsat_1_v5_gn_6_1640 Lactuca sativa HOM05D007450 ORTHO05D009377 2.3e-17 92.4 91 57.1
BcaB03g13745 Brassica carinata HOM05D007450 ORTHO05D009377 4.0e-17 91.7 92 58.7
Potri.003G095100 Populus trichocarpa HOM05D007450 ORTHO05D009377 5.2e-17 91.3 92 58.7
vmacro14189 Vaccinium macrocarpon HOM05D007450 ORTHO05D009377 6.8e-17 90.9 90 60.0
Aqoxy3G02217 Aquilegia oxysepala HOM05D007450 ORTHO05D009377 7.5e-16 87.4 129 45.7
HanXRQChr13g0395471 Helianthus annuus HOM05D007450 ORTHO05D009377 8.3e-15 84.0 91 56.0
MSTRG.1994 Avicennia marina HOM05D007450 ORTHO05D009377 1.4e-14 83.2 109 46.8
HPP92_001521 Vanilla planifolia HOM05D007450 ORTHO05D009377 7.0e-14 80.9 106 49.1
ATR0829G039 Amborella trichopoda HOM05D007450 ORTHO05D009377 1.3e-12 76.6 93 50.5
CDE11G0326 Ceratophyllum demersum HOM05D007450 ORTHO05D009377 5.6e-11 71.2 87 48.3
Sc01g0007300 Simmondsia chinensis HOM05D007450 ORTHO05D009377 5.6e-11 71.2 138 39.1
SHI36446 Sapria himalayana HOM05D007450 ORTHO05D009377 7.3e-11 70.9 57 63.2
COL.COLO4_16968 Corchorus olitorius HOM05D007450 ORTHO05D009377 9.5e-11 70.5 53 69.8
Hund11210 Selenicereus undatus HOM05D007450 ORTHO05D009377 2.1e-10 69.3 82 47.6
SalBow1G6923 Salvia bowleyana HOM05D007450 ORTHO05D009377 6.2e-10 67.8 79 45.6
EL10Ac5g12043 Beta vulgaris HOM05D007450 ORTHO05D009377 6.8e-09 64.3 95 43.2
Migut.E00781 Erythranthe guttata HOM05D007450 ORTHO05D009377 1.2e-08 63.5 61 57.4
AUR62018673 Chenopodium quinoa HOM05D007450 ORTHO05D009377 1.5e-08 63.2 88 44.3
Os10g0575950 Oryza sativa ssp. japonica HOM05D007450 ORTHO05D009377 1.5e-08 63.2 90 46.7
Zm00001eb024740 Zea mays HOM05D007450 ORTHO05D009377 4.4e-08 61.6 45 64.4
CsaV3_3G048930 Cucumis sativus L. HOM05D007450 ORTHO05D009377 1.7e-07 59.7 40 67.5
CARHR033090 Cardamine hirsuta HOM05D007450 ORTHO05D009377 8.3e-07 57.4 37 70.3


User provided reference genes

Program Settings