Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8048 Trifolium pratense HOM05D003256 ORTHO05D001441 5.4e-107 391.0 192 100.0
Phvul.008G226800 Phaseolus vulgaris HOM05D003256 ORTHO05D001441 1.0e-81 307.0 166 86.1
Medtr5g081780 Medicago truncatula HOM05D003256 ORTHO05D001441 7.4e-80 300.8 167 86.2
Glyma.14G062400 Glycine max HOM05D003256 ORTHO05D001441 9.6e-80 300.4 168 83.9
Psat2g035280 Pisum sativum HOM05D003256 ORTHO05D001441 1.1e-78 297.0 156 91.0
LjContig00357g0006095 Lotus japonicus HOM05D003256 ORTHO05D001441 5.3e-78 294.7 177 80.2
Manes.07G124900 Manihot esculenta HOM05D003256 ORTHO05D001441 9.0e-70 267.3 159 76.7
Dinv34426 Davidia involucrata HOM05D003256 ORTHO05D001441 3.4e-69 265.4 158 77.2
Thecc.10G026900 Theobroma cacao HOM05D003256 ORTHO05D001441 4.9e-68 261.5 158 75.9
Gorai.011G279500 Gossypium raimondii HOM05D003256 ORTHO05D001441 1.1e-67 260.4 158 76.6
COL.COLO4_25668 Corchorus olitorius HOM05D003256 ORTHO05D001441 2.5e-67 259.2 159 73.6
Prupe.2G245700 Prunus persica HOM05D003256 ORTHO05D005659 5.5e-67 258.1 161 72.7
MD01G1146400 Malus domestica HOM05D003256 ORTHO05D001441 1.6e-66 256.5 160 74.4
Gohir.D10G243100 Gossypium hirsutum HOM05D003256 ORTHO05D001441 2.7e-66 255.8 158 75.3
Potri.008G063900 Populus trichocarpa HOM05D003256 ORTHO05D001441 3.5e-66 255.4 158 75.3
Eucgr.G03027 Eucalyptus grandis HOM05D003256 ORTHO05D001441 4.6e-66 255.0 162 72.8
TAR633G0704 Trochodendron aralioides HOM05D003256 ORTHO05D001441 4.6e-66 255.0 162 71.0
Gohir.A10G229100 Gossypium hirsutum HOM05D003256 ORTHO05D001441 1.3e-65 253.4 158 74.7
FAN03G3030 Fragaria x ananassa HOM05D003256 ORTHO05D001441 5.1e-65 251.5 164 69.5
CSS0012310 Camellia sinensis var. sinensis HOM05D003256 ORTHO05D001441 8.7e-65 250.8 160 71.9
CSS0030450 Camellia sinensis var. sinensis HOM05D003256 ORTHO05D001441 8.7e-65 250.8 160 71.9
Ciclev10033656m.g Citrus clementina HOM05D003256 ORTHO05D001441 2.5e-64 249.2 156 72.4
RcHm_v2.0_Chr1g0369311 Rosa chinensis HOM05D003256 ORTHO05D001441 2.5e-64 249.2 160 70.6
Atru.chr12.248 Acer truncatum HOM05D003256 ORTHO05D001441 3.3e-64 248.8 153 72.5
Cpa.g.sc19.220 Carica papaya HOM05D003256 ORTHO05D001441 3.3e-64 248.8 157 73.9
FvH4_7g23970 Fragaria vesca HOM05D003256 ORTHO05D001441 7.4e-64 247.7 160 70.0
FAN06G1448 Fragaria x ananassa HOM05D003256 ORTHO05D005659 9.7e-64 247.3 160 70.0
FAN10G1586 Fragaria x ananassa HOM05D003256 ORTHO05D001441 2.2e-63 246.1 160 69.4
TWI53G0608 Tripterygium wilfordii HOM05D003256 ORTHO05D001441 3.7e-63 245.4 160 70.0
Hma1.2p1_0026F.1_g016990 Hydrangea macrophylla HOM05D003256 ORTHO05D001441 8.2e-63 244.2 160 70.6
QL08p062603 Quercus lobata HOM05D003256 ORTHO05D001441 8.2e-63 244.2 148 75.7
Sed0024300 Sechium edule HOM05D003256 ORTHO05D001441 1.1e-62 243.8 164 66.5
CsaV3_5G008890 Cucumis sativus L. HOM05D003256 ORTHO05D001441 1.8e-62 243.0 161 67.1
Peaxi162Scf00401g00006 Petunia axillaris HOM05D000080 ORTHO05D000053 1.8e-62 243.0 159 70.4
MELO3C025149.2 Cucumis melo HOM05D003256 ORTHO05D005659 2.4e-62 242.7 165 65.5
Lsat_1_v5_gn_8_12360 Lactuca sativa HOM05D003256 ORTHO05D001441 2.4e-62 242.7 154 73.4
Aqoxy1G00709 Aquilegia oxysepala HOM05D003256 ORTHO05D001441 3.1e-62 242.3 158 69.6
ClCG07G003930 Citrullus lanatus HOM05D003256 ORTHO05D001441 4.1e-62 241.9 163 66.3
PGR142G3668 Punica granatum HOM05D003256 ORTHO05D001441 2.0e-61 239.6 153 68.0
DCAR_011785 Daucus carota HOM05D003256 ORTHO05D005659 3.4e-61 238.8 156 67.9
Oeu003436.1 Olea europaea HOM05D003256 ORTHO05D001441 1.3e-60 236.9 151 70.9
Migut.F01435 Erythranthe guttata HOM05D003256 ORTHO05D001441 2.2e-60 236.1 159 67.9
Cfa001371 Carpinus fangiana HOM05D003256 ORTHO05D001441 6.5e-60 234.6 148 73.0
CiPaw.02G189500 Carya illinoinensis HOM05D003256 ORTHO05D001441 2.3e-57 226.1 158 68.4
ATR0618G299 Amborella trichopoda HOM05D003256 ORTHO05D001441 1.3e-55 220.3 145 66.2
HanXRQChr08g0222221 Helianthus annuus HOM05D003256 ORTHO05D001441 4.5e-45 185.3 120 72.5
FAN01G1344 Fragaria x ananassa HOM05D003256 ORTHO05D005659 1.1e-43 180.6 161 56.5
Zm00001eb298000 Zea mays HOM05D003256 ORTHO05D001441 5.5e-43 178.3 153 52.9
Potri.010G193200 Populus trichocarpa HOM05D003256 ORTHO05D001441 6.5e-36 154.8 96 75.0
Glyma.02G254100 Glycine max HOM05D003256 ORTHO05D001441 3.0e-33 146.0 86 76.7
SMO367G0825 Selaginella moellendorffii HOM05D003256 ORTHO05D001441 5.3e-30 135.2 144 40.3
Mapoly0029s0035 Marchantia polymorpha HOM05D001922 ORTHO05D001441 1.7e-23 113.6 155 32.3
SMO146G0127 Selaginella moellendorffii HOM05D003256 ORTHO05D001441 3.3e-19 99.4 138 35.5
SMO203G0066 Selaginella moellendorffii HOM05D001922 ORTHO05D001441 8.0e-18 94.7 127 34.6
SEGI_03891 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 3.0e-17 92.8 156 33.3
Mapoly0006s0151 Marchantia polymorpha HOM05D038656 ORTHO05D001441 5.2e-17 92.0 157 35.0
Dinv23381 Davidia involucrata HOM05D001922 ORTHO05D001441 2.0e-16 90.1 158 28.5
QL12p041108 Quercus lobata HOM05D001922 ORTHO05D001441 2.0e-16 90.1 154 29.2
TWI34G0875 Tripterygium wilfordii HOM05D001922 ORTHO05D001441 2.6e-16 89.7 149 29.5
Lsat_1_v5_gn_1_45660 Lactuca sativa HOM05D001922 ORTHO05D001441 9.8e-16 87.8 135 34.1
CSS0020504 Camellia sinensis var. sinensis HOM05D001922 ORTHO05D001441 3.7e-15 85.9 174 25.9
CSS0023390 Camellia sinensis var. sinensis HOM05D001922 ORTHO05D001441 3.7e-15 85.9 174 25.9
MELO3C011134.2 Cucumis melo HOM05D001922 ORTHO05D001441 6.3e-15 85.1 154 31.2
CsaV3_2G030790 Cucumis sativus L. HOM05D001922 ORTHO05D001441 6.3e-15 85.1 151 29.8
ECA248G2877 Erigeron canadensis HOM05D001922 ORTHO05D001441 1.4e-14 84.0 135 31.9
Mapoly0006s0042 Marchantia polymorpha HOM05D003256 ORTHO05D001441 1.4e-14 84.0 148 30.4
SEGI_16616 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 1.4e-14 84.0 151 31.8
CiPaw.03G226300 Carya illinoinensis HOM05D001922 ORTHO05D001441 1.8e-14 83.6 159 26.4
Lj1P1172T49 Lonicera japonica HOM05D001922 ORTHO05D001441 1.8e-14 83.6 151 27.8
PSO210G4370 Papaver somniferum HOM05D001922 ORTHO05D001441 3.1e-14 82.8 159 25.8
CARHR115470 Cardamine hirsuta HOM05D001922 ORTHO05D001441 5.4e-14 82.0 157 30.6
AUR62021429 Chenopodium quinoa HOM05D001922 ORTHO05D001441 5.4e-14 82.0 158 26.6
Cfa003197 Carpinus fangiana HOM05D001922 ORTHO05D001441 7.0e-14 81.6 162 28.4
Sp7g30640 Schrenkiella parvula HOM05D001922 ORTHO05D001441 7.0e-14 81.6 153 32.7
SEGI_41389 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 7.0e-14 81.6 154 29.9
Os01g0724700 Oryza sativa ssp. japonica HOM05D001922 ORTHO05D001441 9.2e-14 81.3 160 29.4
Rhsim07G0146400 Rhododendron simsii HOM05D001922 ORTHO05D001441 2.7e-13 79.7 160 28.1
THA.LOC104803751 Tarenaya hassleriana HOM05D001922 ORTHO05D001441 2.7e-13 79.7 133 30.8
A08p17860 Brassica napus HOM05D001922 ORTHO05D001441 4.5e-13 79.0 158 27.2
BraA08t33738Z Brassica rapa HOM05D001922 ORTHO05D001441 4.5e-13 79.0 158 27.2
PSO210G2147 Papaver somniferum HOM05D001922 ORTHO05D001441 4.5e-13 79.0 159 24.5
Sabra18G0044900 Salix brachista HOM05D001922 ORTHO05D001441 5.9e-13 78.6 141 30.5
A03p61620 Brassica napus HOM05D001922 ORTHO05D001441 7.8e-13 78.2 160 29.4
ECA248G0913 Erigeron canadensis HOM05D001922 ORTHO05D001441 1.0e-12 77.8 150 26.7
C03p86930 Brassica napus HOM05D001922 ORTHO05D001441 1.3e-12 77.4 158 26.6
BraA03t15204Z Brassica rapa HOM05D001922 ORTHO05D001441 1.3e-12 77.4 160 29.4
COL.COLO4_20989 Corchorus olitorius HOM05D001922 ORTHO05D001441 1.3e-12 77.4 167 26.3
Thhalv10026440m.g Eutrema salsugineum HOM05D001922 ORTHO05D001441 1.3e-12 77.4 153 29.4
HanXRQChr11g0352331 Helianthus annuus HOM05D001922 ORTHO05D001441 1.3e-12 77.4 135 30.4
Aa31LG5G9850 Aethionema arabicum HOM05D001922 ORTHO05D001441 1.7e-12 77.0 157 31.2
AL7G18850 Arabidopsis lyrata HOM05D001922 ORTHO05D001441 1.7e-12 77.0 153 27.5
BolC3t20993H Brassica oleracea HOM05D001922 ORTHO05D001441 1.7e-12 77.0 158 26.6
BolC1t00593H Brassica oleracea HOM05D001922 ORTHO05D001441 2.3e-12 76.6 153 30.1
Eucgr.C02962 Eucalyptus grandis HOM05D001922 ORTHO05D001441 2.9e-12 76.3 160 27.5
TAR636G2649 Trochodendron aralioides HOM05D001922 ORTHO05D001441 2.9e-12 76.3 157 24.2
BcaC09g52086 Brassica carinata HOM05D001922 ORTHO05D001441 3.8e-12 75.9 153 30.1
C01p06010 Brassica napus HOM05D001922 ORTHO05D001441 3.8e-12 75.9 153 30.1
A01p05410 Brassica napus HOM05D001922 ORTHO05D001441 5.0e-12 75.5 153 30.1
BraA01t00515Z Brassica rapa HOM05D001922 ORTHO05D001441 5.0e-12 75.5 153 30.1
Lalb_Chr24g0397341 Lupinus albus HOM05D001922 ORTHO05D001441 5.0e-12 75.5 140 29.3
Potri.018G046100 Populus trichocarpa HOM05D001922 ORTHO05D001441 5.0e-12 75.5 160 27.5
Thecc.09G102300 Theobroma cacao HOM05D001922 ORTHO05D001441 5.0e-12 75.5 157 27.4
AagrBONN_evm.TU.Sc2ySwM_117.983 Anthoceros agrestis HOM05D003256 ORTHO05D001441 6.6e-12 75.1 164 31.7
AT2G25770 Arabidopsis thaliana HOM05D001922 ORTHO05D001441 6.6e-12 75.1 157 27.4
SGA_v2.0_scaffold103G30016 Striga asiatica HOM05D001922 ORTHO05D001441 6.6e-12 75.1 150 29.3
Duzib168G0989 Durio zibethinus HOM05D001922 ORTHO05D001441 8.6e-12 74.7 134 30.6
Eucgr.C02941 Eucalyptus grandis HOM05D001922 ORTHO05D001441 1.1e-11 74.3 160 27.5
Sabra10G0148900 Salix brachista HOM05D003187 ORTHO05D003630 1.1e-11 74.3 51 68.6
TWI32G1196 Tripterygium wilfordii HOM05D001922 ORTHO05D001441 1.1e-11 74.3 158 25.9
Phvul.004G170100 Phaseolus vulgaris HOM05D001922 ORTHO05D001441 1.5e-11 73.9 136 31.6
Ah.09g230740 Amaranthus hybridus HOM05D001922 ORTHO05D001441 1.9e-11 73.6 157 25.5
MSTRG.11692 Avicennia marina HOM05D001922 ORTHO05D001441 2.5e-11 73.2 141 26.2
AUR62009241 Chenopodium quinoa HOM05D001922 ORTHO05D001441 2.5e-11 73.2 162 27.2
Dinv41660 Davidia involucrata HOM05D001922 ORTHO05D001441 2.5e-11 73.2 142 26.8
CDE05G2145 Ceratophyllum demersum HOM05D001613 ORTHO05D001556 3.3e-11 72.8 160 25.0
Eucgr.C03766 Eucalyptus grandis HOM05D001922 ORTHO05D001441 3.3e-11 72.8 147 26.5
TAR383G0055 Trochodendron aralioides HOM05D001922 ORTHO05D001441 3.3e-11 72.8 153 25.5
Eucgr.C03776 Eucalyptus grandis HOM05D001922 ORTHO05D001441 4.3e-11 72.4 145 26.9
SEGI_34505 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 4.3e-11 72.4 123 33.3
AagrBONN_evm.TU.Sc2ySwM_117.997 Anthoceros agrestis HOM05D003256 ORTHO05D001441 5.6e-11 72.0 165 29.7
Eucgr.C02949 Eucalyptus grandis HOM05D001922 ORTHO05D001441 5.6e-11 72.0 160 25.0
QL12p041137 Quercus lobata HOM05D001922 ORTHO05D001441 5.6e-11 72.0 156 25.6
CDE02G4065 Ceratophyllum demersum HOM05D001922 ORTHO05D001441 7.3e-11 71.6 155 26.5
Atru.chr7.1444 Acer truncatum HOM05D001922 ORTHO05D001441 9.5e-11 71.2 150 26.0
Aqoxy1G04094 Aquilegia oxysepala HOM05D001922 ORTHO05D001441 9.5e-11 71.2 153 26.8
TWI32G0281 Tripterygium wilfordii HOM05D001922 ORTHO05D001441 9.5e-11 71.2 160 25.6
Lsat_1_v5_gn_1_45720 Lactuca sativa HOM05D001922 ORTHO05D001441 1.2e-10 70.9 175 25.7
Aqoxy7G01457 Aquilegia oxysepala HOM05D001922 ORTHO05D001441 1.6e-10 70.5 159 28.9
TPR.G14860 Trifolium pratense HOM05D001922 ORTHO05D001441 1.6e-10 70.5 153 27.5
Pp3c7_25770 Physcomitrium patens HOM05D021802 ORTHO05D001441 2.1e-10 70.1 158 28.5
SMO364G0193 Selaginella moellendorffii HOM05D003256 ORTHO05D001441 3.6e-10 69.3 153 31.4
CSS0011319 Camellia sinensis var. sinensis HOM05D001922 ORTHO05D001441 4.7e-10 68.9 153 28.1
Gohir.D13G193300 Gossypium hirsutum HOM05D001922 ORTHO05D001441 4.7e-10 68.9 151 25.8
Gorai.013G219300 Gossypium raimondii HOM05D001922 ORTHO05D001441 4.7e-10 68.9 151 25.8
BcaB08g35218 Brassica carinata HOM05D001922 ORTHO05D001441 8.0e-10 68.2 133 26.3
SMO115G0051 Selaginella moellendorffii HOM05D001922 ORTHO05D001441 8.0e-10 68.2 132 29.5
Gohir.A07G022253 Gossypium hirsutum HOM05D001922 ORTHO05D001441 1.0e-09 67.8 158 25.9
Gohir.A13G186500 Gossypium hirsutum HOM05D001922 ORTHO05D001441 1.0e-09 67.8 151 25.8
ATR0705G142 Amborella trichopoda HOM05D001922 ORTHO05D001441 1.4e-09 67.4 125 26.4
SMO364G0633 Selaginella moellendorffii HOM05D003256 ORTHO05D001441 1.4e-09 67.4 154 31.2
Manes.03G059750 Manihot esculenta HOM05D001922 ORTHO05D001441 1.8e-09 67.0 138 26.8
SEGI_30345 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 1.8e-09 67.0 134 30.6
Pp3c10_23690 Physcomitrium patens HOM05D001922 ORTHO05D001441 3.1e-09 66.2 160 24.4
SEGI_07353 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 3.1e-09 66.2 133 29.3
Rhsim02G0176200 Rhododendron simsii HOM05D001922 ORTHO05D001441 4.0e-09 65.9 162 22.2
TAR383G0559 Trochodendron aralioides HOM05D001922 ORTHO05D001441 5.2e-09 65.5 137 24.1
CDE05G3443 Ceratophyllum demersum HOM05D000299 ORTHO05D000079 6.8e-09 65.1 154 23.4
C08p38440 Brassica napus HOM05D001922 ORTHO05D001441 1.2e-08 64.3 157 24.2
Eucgr.C03768 Eucalyptus grandis HOM05D001922 ORTHO05D001441 1.5e-08 63.9 130 26.9
Eucgr.C03772 Eucalyptus grandis HOM05D001922 ORTHO05D001441 1.5e-08 63.9 130 26.9
HPP92_005575 Vanilla planifolia HOM05D001922 ORTHO05D001441 2.0e-08 63.5 136 29.4
ECA248G3033 Erigeron canadensis HOM05D008265 ORTHO05D000440 2.6e-08 63.2 93 35.5
Phvul.009G111000 Phaseolus vulgaris HOM05D001922 ORTHO05D001441 2.6e-08 63.2 146 25.3
Pp3c3_3850 Physcomitrium patens HOM05D021802 ORTHO05D001441 2.6e-08 63.2 126 30.2
AagrBONN_evm.TU.Sc2ySwM_228.1828 Anthoceros agrestis HOM05D003256 ORTHO05D001441 3.4e-08 62.8 141 29.8
BcaC07g40846 Brassica carinata HOM05D001922 ORTHO05D001441 3.4e-08 62.8 133 24.8
BolC8t51416H Brassica oleracea HOM05D001922 ORTHO05D001441 3.4e-08 62.8 133 24.8
Mapoly0021s0125 Marchantia polymorpha HOM05D003256 ORTHO05D001441 3.4e-08 62.8 146 24.7
AagrBONN_evm.TU.Sc2ySwM_228.237 Anthoceros agrestis HOM05D003256 ORTHO05D001441 4.4e-08 62.4 154 28.6
A09p55450 Brassica napus HOM05D001922 ORTHO05D001441 5.8e-08 62.0 133 24.8
BraA09t40947Z Brassica rapa HOM05D001922 ORTHO05D001441 5.8e-08 62.0 133 24.8
Aqoxy7G01476 Aquilegia oxysepala HOM05D001922 ORTHO05D001441 7.5e-08 61.6 158 23.4
RhsimUnG0223000 Rhododendron simsii HOM05D001922 ORTHO05D001441 7.5e-08 61.6 145 23.4
EL10Ac8g18401 Beta vulgaris HOM05D001922 ORTHO05D001441 9.8e-08 61.2 125 24.0
AUR62041968 Chenopodium quinoa HOM05D001922 ORTHO05D001441 9.8e-08 61.2 150 27.3
Cfa013381 Carpinus fangiana HOM05D001922 ORTHO05D001441 1.3e-07 60.8 108 33.3
Eucgr.C03779 Eucalyptus grandis HOM05D001922 ORTHO05D001441 2.9e-07 59.7 130 26.2
AUR62009240 Chenopodium quinoa HOM05D001922 ORTHO05D001441 4.9e-07 58.9 147 25.9
AagrBONN_evm.TU.Sc2ySwM_228.1829 Anthoceros agrestis HOM05D003256 ORTHO05D001441 6.4e-07 58.5 149 26.8
CAN.G20.25 Capsicum annuum HOM05D001922 ORTHO05D001441 6.4e-07 58.5 165 23.0
Atru.chr7.2065 Acer truncatum HOM05D001922 ORTHO05D001441 1.4e-06 57.4 177 22.6
Atru.chr7.2067 Acer truncatum HOM05D001922 ORTHO05D001441 5.4e-06 55.5 163 23.3


User provided reference genes

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